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3090 Publications
2017 | Conference Paper | IST-REx-ID: 551 |

Faster Monte Carlo algorithms for fixation probability of the Moran process on undirected graphs
K. Chatterjee, R. Ibsen-Jensen, M. Nowak, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
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K. Chatterjee, R. Ibsen-Jensen, M. Nowak, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
2017 | Conference Paper | IST-REx-ID: 553 |

Strategy complexity of concurrent safety games
K. Chatterjee, K. Hansen, R. Ibsen-Jensen, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
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K. Chatterjee, K. Hansen, R. Ibsen-Jensen, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
2017 | Research Data | IST-REx-ID: 5559 |

Strong amplifiers of natural selection
A. Pavlogiannis, J. Tkadlec, K. Chatterjee, M. Nowak , (2017).
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A. Pavlogiannis, J. Tkadlec, K. Chatterjee, M. Nowak , (2017).
2017 | Research Data | IST-REx-ID: 5560 |

Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity
T. Bergmiller, A.M. Andersson, K. Tomasek, E. Balleza, D. Kiviet, R. Hauschild, G. Tkačik, C.C. Guet, (2017).
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T. Bergmiller, A.M. Andersson, K. Tomasek, E. Balleza, D. Kiviet, R. Hauschild, G. Tkačik, C.C. Guet, (2017).
2017 | Research Data | IST-REx-ID: 5561 |

Graph matching problems for annotating C. Elegans
D. Kainmueller, F. Jug, C. Rother, G. Meyers, (2017).
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D. Kainmueller, F. Jug, C. Rother, G. Meyers, (2017).
2017 | Research Data | IST-REx-ID: 5562 |

Multi-electrode array recording from salamander retinal ganglion cells
O. Marre, G. Tkačik, D. Amodei, E. Schneidman, W. Bialek, M. Berry, (2017).
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O. Marre, G. Tkačik, D. Amodei, E. Schneidman, W. Bialek, M. Berry, (2017).
2017 | Research Data | IST-REx-ID: 5563 |

MATLAB analysis code for 'Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast'
M. Lukacisin, (2017).
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M. Lukacisin, (2017).
2017 | Research Data | IST-REx-ID: 5564 |

Fastq files for "Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection"
M. Steinrück, C.C. Guet, (2017).
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M. Steinrück, C.C. Guet, (2017).
2017 | Research Data | IST-REx-ID: 5565 |

Light Sheet Fluorescence microscopy of plant roots growing on the surface of a gel
D. von Wangenheim, R. Hauschild, J. Friml, (2017).
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D. von Wangenheim, R. Hauschild, J. Friml, (2017).
2017 | Research Data | IST-REx-ID: 5566 |

Live tracking of moving samples in confocal microscopy for vertically grown roots
R. Hauschild, (2017).
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R. Hauschild, (2017).
2017 | Research Data | IST-REx-ID: 5567 |

Immunological synapse DC-Tcells
A.F. Leithner, (2017).
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A.F. Leithner, (2017).
2017 | Research Data | IST-REx-ID: 5568 |

Source codes: Brittle fracture simulation with boundary elements for computer graphics
D. Hahn, (2017).
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D. Hahn, (2017).
2017 | Journal Article | IST-REx-ID: 557 |

AAV2 mediated transduction of the mouse retina after optic nerve injury
R. Nickells, H. Schmitt, M.E. Maes, C. Schlamp, Investigative Ophthalmology and Visual Science 58 (2017) 6091–6104.
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R. Nickells, H. Schmitt, M.E. Maes, C. Schlamp, Investigative Ophthalmology and Visual Science 58 (2017) 6091–6104.
2017 | Research Data | IST-REx-ID: 5570 |

Forward migration indexes
R. Hauschild, (2017).
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R. Hauschild, (2017).
2017 | Research Data | IST-REx-ID: 5571 |

Data for "The genomic characterization of the t-haplotype, a mouse meiotic driver, highlights its complex history and specialized biology"
B. Vicoso, (2017).
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B. Vicoso, (2017).
2017 | Research Data | IST-REx-ID: 5572 |

Code for "The genomic characterization of the t-haplotype, a mouse meiotic driver, highlights its complex history and specialized biology"
B. Vicoso, (2017).
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B. Vicoso, (2017).
2017 | Conference Paper | IST-REx-ID: 559 |

Beyond Hellman’s time-memory trade-offs with applications to proofs of space
H.M. Abusalah, J.F. Alwen, B. Cohen, D. Khilko, K.Z. Pietrzak, L. Reyzin, in:, Springer, 2017, pp. 357–379.
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H.M. Abusalah, J.F. Alwen, B. Cohen, D. Khilko, K.Z. Pietrzak, L. Reyzin, in:, Springer, 2017, pp. 357–379.
2017 | Journal Article | IST-REx-ID: 560 |

On stochastic differential equations with arbitrarily slow convergence rates for strong approximation in two space dimensions
M. Gerencser, A. Jentzen, D. Salimova, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences 473 (2017).
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M. Gerencser, A. Jentzen, D. Salimova, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences 473 (2017).
2017 | Journal Article | IST-REx-ID: 568 |

Persistence of zero sets
P. Franek, M. Krcál, Homology, Homotopy and Applications 19 (2017) 313–342.
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P. Franek, M. Krcál, Homology, Homotopy and Applications 19 (2017) 313–342.
2017 | Journal Article | IST-REx-ID: 569 |

Cytokinesis in vertebrate cells initiates by contraction of an equatorial actomyosin network composed of randomly oriented filaments
F. Spira, S. Cuylen Haering, S. Mehta, M. Samwer, A. REVERSAT, A. Verma, R. Oldenbourg, M.K. Sixt, D. Gerlich, ELife 6 (2017).
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F. Spira, S. Cuylen Haering, S. Mehta, M. Samwer, A. REVERSAT, A. Verma, R. Oldenbourg, M.K. Sixt, D. Gerlich, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 570 |

Regulatory network structure determines patterns of intermolecular epistasis
M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 572 |

Control of endogenous auxin levels in plant root development
D. Olatunji, D. Geelen, I. Verstraeten, International Journal of Molecular Sciences 18 (2017).
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D. Olatunji, D. Geelen, I. Verstraeten, International Journal of Molecular Sciences 18 (2017).
2017 | Journal Article | IST-REx-ID: 6013 |

Experimental evidence for quantum tunneling time
N. Camus, E. Yakaboylu, L. Fechner, M. Klaiber, M. Laux, Y. Mi, K.Z. Hatsagortsyan, T. Pfeifer, C.H. Keitel, R. Moshammer, Physical Review Letters 119 (2017).
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| arXiv
N. Camus, E. Yakaboylu, L. Fechner, M. Klaiber, M. Laux, Y. Mi, K.Z. Hatsagortsyan, T. Pfeifer, C.H. Keitel, R. Moshammer, Physical Review Letters 119 (2017).
2017 | Book Chapter | IST-REx-ID: 604 |

Molecular impurities interacting with a many-particle environment: From ultracold gases to helium nanodroplets
M. Lemeshko, R. Schmidt, in:, O. Dulieu, A. Osterwalder (Eds.), Cold Chemistry: Molecular Scattering and Reactivity Near Absolute Zero , The Royal Society of Chemistry, 2017, pp. 444–495.
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M. Lemeshko, R. Schmidt, in:, O. Dulieu, A. Osterwalder (Eds.), Cold Chemistry: Molecular Scattering and Reactivity Near Absolute Zero , The Royal Society of Chemistry, 2017, pp. 444–495.
2017 | Conference Paper | IST-REx-ID: 605 |

Position based cryptography and multiparty communication complexity
J. Brody, S. Dziembowski, S. Faust, K.Z. Pietrzak, in:, Y. Kalai, L. Reyzin (Eds.), Springer, 2017, pp. 56–81.
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J. Brody, S. Dziembowski, S. Faust, K.Z. Pietrzak, in:, Y. Kalai, L. Reyzin (Eds.), Springer, 2017, pp. 56–81.
2017 | Conference Paper | IST-REx-ID: 697 |

Non uniform attacks against pseudoentropy
K.Z. Pietrzak, M. Skórski, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
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K.Z. Pietrzak, M. Skórski, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
2017 | Journal Article | IST-REx-ID: 698 |

Orientation and repositioning of chromosomes correlate with cell geometry dependent gene expression
Y. Wang, M. Nagarajan, C. Uhler, G. Shivashankar, Molecular Biology of the Cell 28 (2017) 1997–2009.
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Y. Wang, M. Nagarajan, C. Uhler, G. Shivashankar, Molecular Biology of the Cell 28 (2017) 1997–2009.
2017 | Journal Article | IST-REx-ID: 699 |

The red queen and king in finite populations
C. Veller, L. Hayward, M. Nowak, C. Hilbe, PNAS 114 (2017) E5396–E5405.
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| PubMed | Europe PMC
C. Veller, L. Hayward, M. Nowak, C. Hilbe, PNAS 114 (2017) E5396–E5405.
2017 | Journal Article | IST-REx-ID: 700 |

Optomechanical proposal for monitoring microtubule mechanical vibrations
S. Barzanjeh, V. Salari, J. Tuszynski, M. Cifra, C. Simon, Physical Review E Statistical Nonlinear and Soft Matter Physics 96 (2017).
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S. Barzanjeh, V. Salari, J. Tuszynski, M. Cifra, C. Simon, Physical Review E Statistical Nonlinear and Soft Matter Physics 96 (2017).
2017 | Journal Article | IST-REx-ID: 701 |

On the nonexistence of k reptile simplices in ℝ^3 and ℝ^4
J. Kynčl, Z. Patakova, The Electronic Journal of Combinatorics 24 (2017) 1–44.
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J. Kynčl, Z. Patakova, The Electronic Journal of Combinatorics 24 (2017) 1–44.
2017 | Journal Article | IST-REx-ID: 707 |

A tight estimate for the waist of the ball
A. Akopyan, R. Karasev, Bulletin of the London Mathematical Society 49 (2017) 690–693.
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A. Akopyan, R. Karasev, Bulletin of the London Mathematical Society 49 (2017) 690–693.
2017 | Journal Article | IST-REx-ID: 708 |

Different patterns of neuronal activity trigger distinct responses of oligodendrocyte precursor cells in the corpus callosum
B. Nagy, A. Hovhannisyan, R. Barzan, T. Chen, M. Kukley, PLoS Biology 15 (2017).
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B. Nagy, A. Hovhannisyan, R. Barzan, T. Chen, M. Kukley, PLoS Biology 15 (2017).
2017 | Conference Paper | IST-REx-ID: 710 |

Renyi entropy estimation revisited
M. Obremski, M. Skórski, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
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M. Obremski, M. Skórski, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
2017 | Conference Paper | IST-REx-ID: 711 |

Bidirectional nested weighted automata
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
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K. Chatterjee, T.A. Henzinger, J. Otop, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
2017 | Journal Article | IST-REx-ID: 712 |

Weak–strong uniqueness of solutions to entropy dissipating reaction–diffusion equations
J.L. Fischer, Nonlinear Analysis: Theory, Methods and Applications 159 (2017) 181–207.
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J.L. Fischer, Nonlinear Analysis: Theory, Methods and Applications 159 (2017) 181–207.
2017 | Journal Article | IST-REx-ID: 713 |

Mapping the mouse Allelome reveals tissue specific regulation of allelic expression
D. Andergassen, C. Dotter, D. Wenzel, V. Sigl, P. Bammer, M. Muckenhuber, D. Mayer, T. Kulinski, H. Theussl, J. Penninger, C. Bock, D. Barlow, F. Pauler, Q. Hudson, ELife 6 (2017).
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D. Andergassen, C. Dotter, D. Wenzel, V. Sigl, P. Bammer, M. Muckenhuber, D. Mayer, T. Kulinski, H. Theussl, J. Penninger, C. Bock, D. Barlow, F. Pauler, Q. Hudson, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 714 |

HIV Tat excites D1 receptor-like expressing neurons from rat nucleus accumbens
G. Brailoiu, E. Deliu, J. Barr, L. Console Bram, A. Ciuciu, M. Abood, E. Unterwald, E. Brǎiloiu, Drug and Alcohol Dependence 178 (2017) 7–14.
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G. Brailoiu, E. Deliu, J. Barr, L. Console Bram, A. Ciuciu, M. Abood, E. Unterwald, E. Brǎiloiu, Drug and Alcohol Dependence 178 (2017) 7–14.
2017 | Journal Article | IST-REx-ID: 716 |

The complexity of mean-payoff pushdown games
K. Chatterjee, Y. Velner, Journal of the ACM 64 (2017) 34.
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| arXiv
K. Chatterjee, Y. Velner, Journal of the ACM 64 (2017) 34.
2017 | Research Data | IST-REx-ID: 7163 |

Supplementary Files for "The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W"
C. Fraisse, (2017).
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C. Fraisse, (2017).
2017 | Journal Article | IST-REx-ID: 717 |

Hyperplane separation technique for multidimensional mean-payoff games
K. Chatterjee, Y. Velner, Journal of Computer and System Sciences 88 (2017) 236–259.
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K. Chatterjee, Y. Velner, Journal of Computer and System Sciences 88 (2017) 236–259.
2017 | Journal Article | IST-REx-ID: 718 |

Expected sizes of poisson Delaunay mosaics and their discrete Morse functions
H. Edelsbrunner, A. Nikitenko, M. Reitzner, Advances in Applied Probability 49 (2017) 745–767.
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| arXiv
H. Edelsbrunner, A. Nikitenko, M. Reitzner, Advances in Applied Probability 49 (2017) 745–767.
2017 | Journal Article | IST-REx-ID: 720 |

Probabilistic models for neural populations that naturally capture global coupling and criticality
J. Humplik, G. Tkačik, PLoS Computational Biology 13 (2017).
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J. Humplik, G. Tkačik, PLoS Computational Biology 13 (2017).
2017 | Journal Article | IST-REx-ID: 721 |

Singularities of solutions to quadratic vector equations on the complex upper half plane
O.H. Ajanki, T.H. Krüger, L. Erdös, Communications on Pure and Applied Mathematics 70 (2017) 1672–1705.
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O.H. Ajanki, T.H. Krüger, L. Erdös, Communications on Pure and Applied Mathematics 70 (2017) 1672–1705.
2017 | Journal Article | IST-REx-ID: 722 |

Shaping 3D root system architecture
E. Morris, M. Griffiths, A. Golebiowska, S. Mairhofer, J. Burr Hersey, T. Goh, D. von Wangenheim, B. Atkinson, C. Sturrock, J. Lynch, K. Vissenberg, K. Ritz, D. Wells, S. Mooney, M. Bennett, Current Biology 27 (2017) R919–R930.
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| PubMed | Europe PMC
E. Morris, M. Griffiths, A. Golebiowska, S. Mairhofer, J. Burr Hersey, T. Goh, D. von Wangenheim, B. Atkinson, C. Sturrock, J. Lynch, K. Vissenberg, K. Ritz, D. Wells, S. Mooney, M. Bennett, Current Biology 27 (2017) R919–R930.
2017 | Journal Article | IST-REx-ID: 724 |

Noninteracting central site model localization and logarithmic entanglement growth
D. Hetterich, M. Serbyn, F. Domínguez, F. Pollmann, B. Trauzettel, Physical Review B 96 (2017).
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D. Hetterich, M. Serbyn, F. Domínguez, F. Pollmann, B. Trauzettel, Physical Review B 96 (2017).
2017 | Journal Article | IST-REx-ID: 725 |

Discrete modes of social information processing predict individual behavior of fish in a group
R. Harpaz, G. Tkačik, E. Schneidman, PNAS 114 (2017) 10149–10154.
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| PubMed | Europe PMC
R. Harpaz, G. Tkačik, E. Schneidman, PNAS 114 (2017) 10149–10154.
2017 | Journal Article | IST-REx-ID: 726 |

A unifying theory of branching morphogenesis
E.B. Hannezo, C. Scheele, M. Moad, N. Drogo, R. Heer, R. Sampogna, J. Van Rheenen, B. Simons, Cell 171 (2017) 242–255.
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E.B. Hannezo, C. Scheele, M. Moad, N. Drogo, R. Heer, R. Sampogna, J. Van Rheenen, B. Simons, Cell 171 (2017) 242–255.
2017 | Journal Article | IST-REx-ID: 732 |

Co-founding ant queens prevent disease by performing prophylactic undertaking behaviour
C. Pull, S. Cremer, BMC Evolutionary Biology 17 (2017).
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C. Pull, S. Cremer, BMC Evolutionary Biology 17 (2017).
2017 | Journal Article | IST-REx-ID: 733 |

Convergence rate for spectral distribution of addition of random matrices
Z. Bao, L. Erdös, K. Schnelli, Advances in Mathematics 319 (2017) 251–291.
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Z. Bao, L. Erdös, K. Schnelli, Advances in Mathematics 319 (2017) 251–291.
2017 | Journal Article | IST-REx-ID: 734 |

Deconstructing superorganisms and societies to address big questions in biology
P. Kennedy, G. Baron, B. Qiu, D. Freitak, H. Helantera, E. Hunt, F. Manfredini, T. O’Shea Wheller, S. Patalano, C. Pull, T. Sasaki, D. Taylor, C. Wyatt, S. Sumner, Trends in Ecology and Evolution 32 (2017) 861–872.
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P. Kennedy, G. Baron, B. Qiu, D. Freitak, H. Helantera, E. Hunt, F. Manfredini, T. O’Shea Wheller, S. Patalano, C. Pull, T. Sasaki, D. Taylor, C. Wyatt, S. Sumner, Trends in Ecology and Evolution 32 (2017) 861–872.