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2698 Publications


2016 | Journal Article | IST-REx-ID: 1273 | OA
Lateral root emergence in Arabidopsis is dependent on transcription factor LBD29 regulation of auxin influx carrier LAX3
S. Porco, A. Larrieu, Y. Du, A. Gaudinier, T. Goh, K. Swarup, R. Swarup, B. Kuempers, A. Bishopp, J. Lavenus, I. Casimiro, K. Hill, E. Benková, H. Fukaki, S. Brady, B. Scheres, B. Peéet, M. Bennett, Development 143 (2016) 3340–3349.
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2016 | Journal Article | IST-REx-ID: 1274 | OA
Vascular cambium regeneration and vessel formation in wounded inflorescence stems of Arabidopsis
E. Mazur, E. Benková, J. Friml, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1276 | OA
Atomistic determinants of co-enzyme Q reduction at the Qi-site of the cytochrome bc1 complex
P. Postila, K. Kaszuba, P. Kuleta, I. Vattulainen, M. Sarewicz, A. Osyczka, T. Róg, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1277 | OA
Danger-associated peptide signaling in Arabidopsis requires clathrin
F. Ortiz Morea, D. Savatin, W. Dejonghe, R. Kumar, Y. Luo, M. Adamowski, J. Van Begin, K. Dressano, G. De Oliveira, X. Zhao, Q. Lu, A. Madder, J. Friml, D. De Moura, E. Russinova, PNAS 113 (2016) 11028–11033.
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2016 | Journal Article | IST-REx-ID: 1278 | OA View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1279 | OA
Optogenetically blocking sharp wave ripple events in sleep does not interfere with the formation of stable spatial representation in the CA1 area of the hippocampus
K. Kovács, J. O’Neill, P. Schönenberger, M. Penttonen, D.K. Rangel Guerrero, J.L. Csicsvari, PLoS One 11 (2016).
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2016 | Journal Article | IST-REx-ID: 1280 | OA
Fixed energy universality for generalized wigner matrices
P. Bourgade, L. Erdös, H. Yau, J. Yin, Communications on Pure and Applied Mathematics 69 (2016) 1815–1881.
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2016 | Journal Article | IST-REx-ID: 1281 | OA
Nitrate controls root development through posttranscriptional regulation of the NRT1.1/NPF6.3 transporter sensor
E. Bouguyon, F. Perrine Walker, M. Pervent, J. Rochette, C. Cuesta, E. Benková, A. Martinière, L. Bach, G. Krouk, A. Gojon, P. Nacry, Plant Physiology 172 (2016) 1237–1248.
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2016 | Journal Article | IST-REx-ID: 1282 | OA
On eigenvalues of random complexes
A. Gundert, U. Wagner, Israel Journal of Mathematics 216 (2016) 545–582.
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2016 | Journal Article | IST-REx-ID: 1286 | OA
Rotation of cold molecular ions inside a Bose-Einstein condensate
B. Midya, M. Tomza, R. Schmidt, M. Lemeshko, Physical Review A - Atomic, Molecular, and Optical Physics 94 (2016).
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2016 | Journal Article | IST-REx-ID: 1287 | OA
Modes and exceptional points in waveguides with impedance boundary conditions
B. Midya, V. Konotop, Optics Letters 41 (2016) 4621–4624.
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2016 | Journal Article | IST-REx-ID: 1289 | OA
The classification of endoscopy images with persistent homology
O. Dunaeva, H. Edelsbrunner, A. Lukyanov, M. Machin, D. Malkova, R. Kuvaev, S. Kashin, Pattern Recognition Letters 83 (2016) 13–22.
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2016 | Journal Article | IST-REx-ID: 1290 | OA
Compounds that select against the tetracycline-resistance efflux pump
L. Stone, M. Baym, T. Lieberman, R.P. Chait, J. Clardy, R. Kishony, Nature Chemical Biology 12 (2016) 902–904.
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2016 | Journal Article | IST-REx-ID: 1291 | OA
Periodic striped ground states in Ising models with competing interactions
A. Giuliani, R. Seiringer, Communications in Mathematical Physics 347 (2016) 983–1007.
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2016 | Journal Article | IST-REx-ID: 1292 | OA
Computing the Thurston–Bennequin invariant in open books
S. Durst, M. Kegel, M.D. Klukas, Acta Mathematica Hungarica 150 (2016) 441–455.
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2016 | Journal Article | IST-REx-ID: 1293 | OA
Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors
L.T. Solus, C. Uhler, R. Yoshida, Linear Algebra and Its Applications 509 (2016) 247–275.
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2016 | Journal Article | IST-REx-ID: 1323 | OA View | Files available | DOI
 

2016 | Conference Paper | IST-REx-ID: 1325 | OA
Stability in graphs and games
T. Brázdil, V. Forejt, A. Kučera, P. Novotný, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
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2016 | Conference Paper | IST-REx-ID: 1326 | OA
Optimizing the expected mean payoff in Energy Markov Decision Processes
T. Brázdil, A. Kučera, P. Novotný, in:, Springer, 2016, pp. 32–49.
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2016 | Conference Paper | IST-REx-ID: 1327 | OA
Stochastic shortest path with energy constraints in POMDPs
T. Brázdil, K. Chatterjee, M. Chmelik, A. Gupta, P. Novotný, in:, Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems, ACM, 2016, pp. 1465–1466.
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2016 | Journal Article | IST-REx-ID: 1328 | OA
Heavy-hole states in germanium hut wires
H. Watzinger, C. Kloeffel, L. Vukušić, M. Rossell, V. Sessi, J. Kukucka, R. Kirchschlager, E. Lausecker, A. Truhlar, M. Glaser, A. Rastelli, A. Fuhrer, D. Loss, G. Katsaros, Nano Letters 16 (2016) 6879–6885.
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2016 | Journal Article | IST-REx-ID: 1329 | OA
De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata
A.K. Huylmans, A. López Ezquerra, J. Parsch, M. Cordellier, Genome Biology and Evolution 8 (2016) 3120–3139.
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2016 | Journal Article | IST-REx-ID: 1330 | OA
Billiards in convex bodies with acute angles
A. Akopyan, A. Balitskiy, Israel Journal of Mathematics 216 (2016) 833–845.
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2016 | Journal Article | IST-REx-ID: 1332 | OA
Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments
R.P. Chait, A. Palmer, I. Yelin, R. Kishony, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1333 | OA
Humans choose representatives who enforce cooperation in social dilemmas through extortion
M. Milinski, C. Hilbe, D. Semmann, R. Sommerfeld, J. Marotzke, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1334 | OA
Activity dependent plasticity of hippocampal place maps
P. Schönenberger, J. O’Neill, J.L. Csicsvari, Nature Communications 7 (2016).
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2016 | Conference Paper | IST-REx-ID: 1335 | OA
Quantitative monitor automata
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Springer, 2016, pp. 23–38.
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2016 | Journal Article | IST-REx-ID: 1339 | OA
Tunable mechanical coupling between driven microelectromechanical resonators
G. Verbiest, D. Xu, M. Goldsche, T. Khodkov, S. Barzanjeh, N. Von Den Driesch, D. Buca, C. Stampfer, Applied  Physics Letter 109 (2016).
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2016 | Conference Paper | IST-REx-ID: 1340 | OA
The big match in small space
K. Hansen, R. Ibsen-Jensen, M. Koucký, in:, Springer, 2016, pp. 64–76.
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2016 | Conference Paper | IST-REx-ID: 1341 | OA
Dynamic resource allocation games
G. Avni, T.A. Henzinger, O. Kupferman, in:, Springer, 2016, pp. 153–166.
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2016 | Journal Article | IST-REx-ID: 1342 | OA
Spatiotemporal microbial evolution on antibiotic landscapes
M. Baym, T. Lieberman, E. Kelsic, R.P. Chait, R. Gross, I. Yelin, R. Kishony, Science 353 (2016) 1147–1151.
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2016 | Journal Article | IST-REx-ID: 1343 | OA
Dissipative preparation of antiferromagnetic order in the Fermi-Hubbard model
J. Kaczmarczyk, H. Weimer, M. Lemeshko, New Journal of Physics 18 (2016).
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2016 | Journal Article | IST-REx-ID: 1344 | OA View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1345 | OA
Plasma membrane: Negative attraction
G. Molnar, M. Fendrych, J. Friml, Nature Plants 2 (2016).
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2016 | Journal Article | IST-REx-ID: 1346 | OA
Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification
Dejonghe W, Kuenen S, Mylle E, Vasileva MK, Keech O, Viotti C, Swerts J, Fendrych M, Ortiz Morea F, Mishev K, Delang S, Scholl S, Zarza X, Heilmann M, Kourelis J, Kasprowicz J, Nguyen L, Drozdzecki A, Van Houtte I, Szatmári A, Majda M, Baisa G, Bednarek S, Robert S, Audenaert D, Testerink C, Munnik T, Van Damme D, Heilmann I, Schumacher K, Winne J, Friml J, Verstreken P, Russinova E. 2016. Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification. Nature Communications. 7, 11710.
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2016 | Journal Article | IST-REx-ID: 1347 | OA
Deformation of a quantum many-particle system by a rotating impurity
R. Schmidt, M. Lemeshko, Physical Review X 6 (2016).
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2016 | Conference Paper | IST-REx-ID: 1348 | OA
Bounded embeddings of graphs in the plane
R. Fulek, in:, Springer, 2016, pp. 31–42.
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2016 | Conference Paper | IST-REx-ID: 1349 | OA
When non-elitism outperforms elitism for crossing fitness valleys
P. Oliveto, T. Paixao, J. Heredia, D. Sudholt, B. Trubenova, in:, Proceedings of the Genetic and Evolutionary Computation Conference 2016 , ACM, 2016, pp. 1163–1170.
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2016 | Journal Article | IST-REx-ID: 1350 | OA
Synaptic mechanisms of pattern completion in the hippocampal CA3 network
J. Guzmán, A. Schlögl, M. Frotscher, P.M. Jonas, Science 353 (2016) 1117–1123.
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2016 | Journal Article | IST-REx-ID: 1352 | OA
Coexistence of nematic order and superconductivity in the Hubbard model
J. Kaczmarczyk, T. Schickling, J. Bünemann, Physical Review B - Condensed Matter and Materials Physics 94 (2016).
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2016 | Journal Article | IST-REx-ID: 1353 | OA
Deciding absorption
L. Barto, A. Kazda, International Journal of Algebra and Computation 26 (2016) 1033–1060.
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2016 | Journal Article | IST-REx-ID: 1354 | OA
Superconducting cavity electromechanics on a silicon-on-insulator platform
P. Dieterle, M. Kalaee, J.M. Fink, O. Painter, Physical Review Applied 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1355 | OA
Quantum electromechanics on silicon nitride nanomembranes
J.M. Fink, M. Kalaee, A. Pitanti, R. Norte, L. Heinzle, M. Davanço, K. Srinivasan, O. Painter, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1356 | OA View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1357 | OA
Richard Hudson and Norman Kaplan on the coalescent process
N.H. Barton, Genetics 202 (2016) 865–866.
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2016 | Journal Article | IST-REx-ID: 1358 | OA
Intrinsic limits to gene regulation by global crosstalk
T. Friedlander, R. Prizak, C.C. Guet, N.H. Barton, G. Tkačik, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1359 | OA
The effect of gene interactions on the long-term response to selection
T. Paixao, N.H. Barton, PNAS 113 (2016) 4422–4427.
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2016 | Journal Article | IST-REx-ID: 1360 | OA
Elementary approach to closed billiard trajectories in asymmetric normed spaces
A. Akopyan, A. Balitskiy, R. Karasev, A. Sharipova, Proceedings of the American Mathematical Society 144 (2016) 4501–4513.
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2016 | Conference Paper | IST-REx-ID: 1361 | OA
Surface only liquids
F. Da, D. Hahn, C. Batty, C.J. Wojtan, E. Grinspun, in:, ACM, 2016.
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2016 | Conference Paper | IST-REx-ID: 1362 | OA View | Files available | DOI
 

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