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2420 Publications
2015 | Conference Paper | IST-REx-ID: 1424 |

Statistical topological data analysis-A kernel perspective
R. Kwitt, S. Huber, M. Niethammer, W. Lin, U. Bauer, in:, Neural Information Processing Systems, 2015, pp. 3070–3078.
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R. Kwitt, S. Huber, M. Niethammer, W. Lin, U. Bauer, in:, Neural Information Processing Systems, 2015, pp. 3070–3078.
2015 | Conference Paper | IST-REx-ID: 1425 |

Lifelong learning with non-i.i.d. tasks
A. Pentina, C. Lampert, in:, Neural Information Processing Systems, 2015, pp. 1540–1548.
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A. Pentina, C. Lampert, in:, Neural Information Processing Systems, 2015, pp. 1540–1548.
2015 | Conference Paper | IST-REx-ID: 1430 |

First steps towards a runtime comparison of natural and artificial evolution
T. Paixao, D. Sudholt, J. Heredia, B. Trubenova, in:, Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation, ACM, 2015, pp. 1455–1462.
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T. Paixao, D. Sudholt, J. Heredia, B. Trubenova, in:, Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation, ACM, 2015, pp. 1455–1462.
2015 | Conference Paper | IST-REx-ID: 1474 |

Policy privacy in cryptographic access control
A. Ferrara, G. Fuchsbauer, B. Liu, B. Warinschi, in:, IEEE, 2015, pp. 46–60.
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A. Ferrara, G. Fuchsbauer, B. Liu, B. Warinschi, in:, IEEE, 2015, pp. 46–60.
2015 | Conference Paper | IST-REx-ID: 1483 |

A stable multi-scale kernel for topological machine learning
J. Reininghaus, S. Huber, U. Bauer, R. Kwitt, in:, IEEE, 2015, pp. 4741–4748.
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J. Reininghaus, S. Huber, U. Bauer, R. Kwitt, in:, IEEE, 2015, pp. 4741–4748.
2015 | Conference Paper | IST-REx-ID: 1495 |

Relaxed disk packing
H. Edelsbrunner, M. Iglesias Ham, V. Kurlin, in:, Proceedings of the 27th Canadian Conference on Computational Geometry, Queen’s University, 2015, pp. 128–135.
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H. Edelsbrunner, M. Iglesias Ham, V. Kurlin, in:, Proceedings of the 27th Canadian Conference on Computational Geometry, Queen’s University, 2015, pp. 128–135.
2015 | Journal Article | IST-REx-ID: 1497 |

Allelome.PRO, a pipeline to define allele-specific genomic features from high-throughput sequencing data
D. Andergassen, C. Dotter, T. Kulinski, P. Guenzl, P. Bammer, D. Barlow, F. Pauler, Q. Hudson, Nucleic Acids Research 43 (2015).
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D. Andergassen, C. Dotter, T. Kulinski, P. Guenzl, P. Bammer, D. Barlow, F. Pauler, Q. Hudson, Nucleic Acids Research 43 (2015).
2015 | Conference Paper | IST-REx-ID: 1498 |

The need for language support for fault-tolerant distributed systems
C. Dragoi, T.A. Henzinger, D. Zufferey, 32 (2015) 90–102.
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C. Dragoi, T.A. Henzinger, D. Zufferey, 32 (2015) 90–102.
2015 | Conference Paper | IST-REx-ID: 1499 |

Polynomial time decidability of weighted synchronization under partial observability
J. Kretinsky, K. Larsen, S. Laursen, J. Srba, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2015, pp. 142–154.
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J. Kretinsky, K. Larsen, S. Laursen, J. Srba, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2015, pp. 142–154.
2015 | Journal Article | IST-REx-ID: 1542 |

Toward a unifying framework for evolutionary processes
T. Paixao, G. Badkobeh, N.H. Barton, D. Çörüş, D. Dang, T. Friedrich, P. Lehre, D. Sudholt, A. Sutton, B. Trubenova, Journal of Theoretical Biology 383 (2015) 28–43.
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T. Paixao, G. Badkobeh, N.H. Barton, D. Çörüş, D. Dang, T. Friedrich, P. Lehre, D. Sudholt, A. Sutton, B. Trubenova, Journal of Theoretical Biology 383 (2015) 28–43.
2015 | Book Chapter | IST-REx-ID: 1544 |

Using supported bilayers to study the spatiotemporal organization of membrane-bound proteins
P. Nguyen, C. Field, A. Groen, T. Mitchison, M. Loose, in:, Building a Cell from Its Components Parts, Academic Press, 2015, pp. 223–241.
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P. Nguyen, C. Field, A. Groen, T. Mitchison, M. Loose, in:, Building a Cell from Its Components Parts, Academic Press, 2015, pp. 223–241.
2015 | Journal Article | IST-REx-ID: 1546 |

Nanoscale distribution of presynaptic Ca2+ channels and its impact on vesicular release during development
Y. Nakamura, H. Harada, N. Kamasawa, K. Matsui, J. Rothman, R. Shigemoto, R.A. Silver, D. Digregorio, T. Takahashi, Neuron 85 (2015) 145–158.
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Y. Nakamura, H. Harada, N. Kamasawa, K. Matsui, J. Rothman, R. Shigemoto, R.A. Silver, D. Digregorio, T. Takahashi, Neuron 85 (2015) 145–158.
2015 | Journal Article | IST-REx-ID: 1547 |

Resolution of unmixed bipartite graphs
F. Mohammadi, S. Moradi, Bulletin of the Korean Mathematical Society 52 (2015) 977–986.
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F. Mohammadi, S. Moradi, Bulletin of the Korean Mathematical Society 52 (2015) 977–986.
2015 | Journal Article | IST-REx-ID: 1548 |

Infection of Tribolium castaneum with Bacillus thuringiensis: Quantification of bacterial replication within cadavers, transmission via cannibalism, and inhibition of spore germination
B. Milutinovic, C. Höfling, M. Futo, J. Scharsack, J. Kurtz, Applied and Environmental Microbiology 81 (2015) 8135–8144.
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B. Milutinovic, C. Höfling, M. Futo, J. Scharsack, J. Kurtz, Applied and Environmental Microbiology 81 (2015) 8135–8144.
2015 | Book Chapter | IST-REx-ID: 1549 |

Flipping the photoswitch: Ion channels under light control
C. Mckenzie, I. Sanchez-Romero, H.L. Janovjak, in:, Novel Chemical Tools to Study Ion Channel Biology, Springer, 2015, pp. 101–117.
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C. Mckenzie, I. Sanchez-Romero, H.L. Janovjak, in:, Novel Chemical Tools to Study Ion Channel Biology, Springer, 2015, pp. 101–117.
2015 | Journal Article | IST-REx-ID: 1550 |

Clonally related forebrain interneurons disperse broadly across both functional areas and structural boundaries
C. Mayer, X. Jaglin, L. Cobbs, R. Bandler, C. Streicher, C. Cepko, S. Hippenmeyer, G. Fishell, Neuron 87 (2015) 989–998.
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C. Mayer, X. Jaglin, L. Cobbs, R. Bandler, C. Streicher, C. Cepko, S. Hippenmeyer, G. Fishell, Neuron 87 (2015) 989–998.
2015 | Journal Article | IST-REx-ID: 1551 |

Host–pathogen coevolution: The selective advantage of Bacillus thuringiensis virulence and its cry toxin genes
L. El Masri, A. Branca, A. Sheppard, A. Papkou, D. Laehnemann, P. Guenther, S. Prahl, M. Saebelfeld, J. Hollensteiner, H. Liesegang, E. Brzuszkiewicz, R. Daniel, N. Michiels, R. Schulte, J. Kurtz, P. Rosenstiel, A. Telschow, E. Bornberg Bauer, H. Schulenburg, PLoS Biology 13 (2015) 1–30.
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L. El Masri, A. Branca, A. Sheppard, A. Papkou, D. Laehnemann, P. Guenther, S. Prahl, M. Saebelfeld, J. Hollensteiner, H. Liesegang, E. Brzuszkiewicz, R. Daniel, N. Michiels, R. Schulte, J. Kurtz, P. Rosenstiel, A. Telschow, E. Bornberg Bauer, H. Schulenburg, PLoS Biology 13 (2015) 1–30.
2015 | Journal Article | IST-REx-ID: 1554 |

Reporters for sensitive and quantitative measurement of auxin response
C. Liao, W. Smet, G. Brunoud, S. Yoshida, T. Vernoux, D. Weijers, Nature Methods 12 (2015) 207–210.
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C. Liao, W. Smet, G. Brunoud, S. Yoshida, T. Vernoux, D. Weijers, Nature Methods 12 (2015) 207–210.
2015 | Journal Article | IST-REx-ID: 1555 |

Rich bifurcation structure in a two patch vaccination model
D. Knipl, P. Pilarczyk, G. Röst, SIAM Journal on Applied Dynamical Systems 14 (2015) 980–1017.
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D. Knipl, P. Pilarczyk, G. Röst, SIAM Journal on Applied Dynamical Systems 14 (2015) 980–1017.
2015 | Journal Article | IST-REx-ID: 1556 |

The Arabidopsis thaliana elongator complex subunit 2 epigenetically affects root development
Y. Jia, H. Tian, H. Li, Q. Yu, L. Wang, J. Friml, Z. Ding, Journal of Experimental Botany 66 (2015) 4631–4642.
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Y. Jia, H. Tian, H. Li, Q. Yu, L. Wang, J. Friml, Z. Ding, Journal of Experimental Botany 66 (2015) 4631–4642.
2015 | Journal Article | IST-REx-ID: 1559 |

Computational complexity of ecological and evolutionary spatial dynamics
R. Ibsen-Jensen, K. Chatterjee, M. Nowak, PNAS 112 (2015) 15636–15641.
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R. Ibsen-Jensen, K. Chatterjee, M. Nowak, PNAS 112 (2015) 15636–15641.
2015 | Journal Article | IST-REx-ID: 1564 |

Editorial: Emergent neural computation from the interaction of different forms of plasticity
M. Gilson, C. Savin, F. Zenke, Frontiers in Computational Neuroscience 9 (2015).
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M. Gilson, C. Savin, F. Zenke, Frontiers in Computational Neuroscience 9 (2015).
2015 | Journal Article | IST-REx-ID: 1565 |

Dual action of leptin on rest-firing and stimulated catecholamine release via phosphoinositide 3-kinase-riven BK channel up-regulation in mouse chromaffin cells
D. Gavello, D.H. Vandael, S. Gosso, E. Carbone, V. Carabelli, Journal of Physiology 593 (2015) 4835–4853.
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D. Gavello, D.H. Vandael, S. Gosso, E. Carbone, V. Carabelli, Journal of Physiology 593 (2015) 4835–4853.
2015 | Journal Article | IST-REx-ID: 1566 |

An exploration of the universe of polyglutamine structures
À. Gómez Sicilia, M.K. Sikora, M. Cieplak, M. Carrión Vázquez, PLoS Computational Biology 11 (2015).
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À. Gómez Sicilia, M.K. Sikora, M. Cieplak, M. Carrión Vázquez, PLoS Computational Biology 11 (2015).
2015 | Conference Paper | IST-REx-ID: 1502 |

Complete composition operators for IOCO-testing theory
N. Beneš, P. Daca, T.A. Henzinger, J. Kretinsky, D. Nickovic, in:, ACM, 2015, pp. 101–110.
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N. Beneš, P. Daca, T.A. Henzinger, J. Kretinsky, D. Nickovic, in:, ACM, 2015, pp. 101–110.
2015 | Journal Article | IST-REx-ID: 1505 |

Universality for the largest eigenvalue of sample covariance matrices with general population
Z. Bao, G. Pan, W. Zhou, Annals of Statistics 43 (2015) 382–421.
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Z. Bao, G. Pan, W. Zhou, Annals of Statistics 43 (2015) 382–421.
2015 | Journal Article | IST-REx-ID: 1506 |

The logarithmic law of random determinant
Z. Bao, G. Pan, W. Zhou, Bernoulli 21 (2015) 1600–1628.
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Z. Bao, G. Pan, W. Zhou, Bernoulli 21 (2015) 1600–1628.
2015 | Journal Article | IST-REx-ID: 1508 |

Gap universality of generalized Wigner and β ensembles
L. Erdös, H. Yau, Journal of the European Mathematical Society 17 (2015) 1927–2036.
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L. Erdös, H. Yau, Journal of the European Mathematical Society 17 (2015) 1927–2036.
2015 | Journal Article | IST-REx-ID: 1509 |

Embryo-lethal phenotypes in early abp1 mutants are due to disruption of the neighboring BSM gene
J. Michalko, M. Lukacisinova, M.T. Bollenbach, J. Friml, F1000 Research 4 (2015).
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J. Michalko, M. Lukacisinova, M.T. Bollenbach, J. Friml, F1000 Research 4 (2015).
2015 | Conference Paper | IST-REx-ID: 1510 |

On computability and triviality of well groups
P. Franek, M. Krcál, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2015, pp. 842–856.
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P. Franek, M. Krcál, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2015, pp. 842–856.
2015 | Journal Article | IST-REx-ID: 1501 |

CEGAR for compositional analysis of qualitative properties in Markov decision processes
K. Chatterjee, M. Chmelik, P. Daca, Formal Methods in System Design 47 (2015) 230–264.
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K. Chatterjee, M. Chmelik, P. Daca, Formal Methods in System Design 47 (2015) 230–264.
2015 | Journal Article | IST-REx-ID: 1513 |

The X chromosome of hemipteran insects: Conservation, dosage compensation and sex-biased expression
A. Pal, B. Vicoso, Genome Biology and Evolution 7 (2015) 3259–3268.
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A. Pal, B. Vicoso, Genome Biology and Evolution 7 (2015) 3259–3268.
2015 | Journal Article | IST-REx-ID: 1517 |

From large deviations to Wasserstein gradient flows in multiple dimensions
M. Erbar, J. Maas, M. Renger, Electronic Communications in Probability 20 (2015).
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M. Erbar, J. Maas, M. Renger, Electronic Communications in Probability 20 (2015).
2015 | Journal Article | IST-REx-ID: 1519 |

The interpretation of selection coefficients
N.H. Barton, M. Servedio, Evolution 69 (2015) 1101–1112.
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N.H. Barton, M. Servedio, Evolution 69 (2015) 1101–1112.
2015 | Journal Article | IST-REx-ID: 1525 |

Arbeitsgruppe „Nationale Strategie“ des Open Access Network Austria OANA
B. Bauer, G. Blechl, C. Bock, P. Danowski, A. Ferus, A. Graschopf, T. König, K. Mayer, F. Reckling, K. Rieck, P. Seitz, H. Stöger, E. Welzig, VÖB Mitteilungen 68 (2015) 580–607.
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B. Bauer, G. Blechl, C. Bock, P. Danowski, A. Ferus, A. Graschopf, T. König, K. Mayer, F. Reckling, K. Rieck, P. Seitz, H. Stöger, E. Welzig, VÖB Mitteilungen 68 (2015) 580–607.
2015 | Journal Article | IST-REx-ID: 1534 |

Transcriptional regulation of PIN genes by FOUR LIPS and MYB88 during Arabidopsis root gravitropism
H. Wang, K. Yang, J. Zou, L. Zhu, Z. Xie, M. Morita, M. Tasaka, J. Friml, E. Grotewold, T. Beeckman, S. Vanneste, F. Sack, J. Le, Nature Communications 6 (2015).
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H. Wang, K. Yang, J. Zou, L. Zhu, Z. Xie, M. Morita, M. Tasaka, J. Friml, E. Grotewold, T. Beeckman, S. Vanneste, F. Sack, J. Le, Nature Communications 6 (2015).
2015 | Journal Article | IST-REx-ID: 1535 |

Cav1.3 channels as key regulators of neuron-like firings and catecholamine release in chromaffin cells
D.H. Vandael, A. Marcantoni, E. Carbone, Current Molecular Pharmacology 8 (2015) 149–161.
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D.H. Vandael, A. Marcantoni, E. Carbone, Current Molecular Pharmacology 8 (2015) 149–161.
2015 | Journal Article | IST-REx-ID: 1538 |

Iterative experiment design guides the characterization of a light-inducible gene expression circuit
J. Ruess, F. Parise, A. Milias Argeitis, M. Khammash, J. Lygeros, PNAS 112 (2015) 8148–8153.
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J. Ruess, F. Parise, A. Milias Argeitis, M. Khammash, J. Lygeros, PNAS 112 (2015) 8148–8153.
2015 | Journal Article | IST-REx-ID: 1539 |

Minimal moment equations for stochastic models of biochemical reaction networks with partially finite state space
J. Ruess, Journal of Chemical Physics 143 (2015).
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J. Ruess, Journal of Chemical Physics 143 (2015).
2015 | Journal Article | IST-REx-ID: 1569 |

An early secretory pathway mediated by gnom-like 1 and gnom is essential for basal polarity establishment in Arabidopsis thaliana
S. Doyle, A. Haegera, T. Vain, A. Rigala, C. Viotti, M. Łangowskaa, Q. Maa, J. Friml, N. Raikhel, G. Hickse, S. Robert, PNAS 112 (2015) E806–E815.
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S. Doyle, A. Haegera, T. Vain, A. Rigala, C. Viotti, M. Łangowskaa, Q. Maa, J. Friml, N. Raikhel, G. Hickse, S. Robert, PNAS 112 (2015) E806–E815.
2015 | Journal Article | IST-REx-ID: 1570 |

Novel plasticity rule can explain the development of sensorimotor intelligence
R. Der, G.S. Martius, PNAS 112 (2015) E6224–E6232.
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R. Der, G.S. Martius, PNAS 112 (2015) E6224–E6232.
2015 | Journal Article | IST-REx-ID: 1572 |

Validity of the spin-wave approximation for the free energy of the Heisenberg ferromagnet
M. Correggi, A. Giuliani, R. Seiringer, Communications in Mathematical Physics 339 (2015) 279–307.
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M. Correggi, A. Giuliani, R. Seiringer, Communications in Mathematical Physics 339 (2015) 279–307.
2015 | Journal Article | IST-REx-ID: 1573 |

Unconditional uniqueness for the cubic gross pitaevskii hierarchy via quantum de finetti
T. Chen, C. Hainzl, N. Pavlović, R. Seiringer, Communications on Pure and Applied Mathematics 68 (2015) 1845–1884.
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T. Chen, C. Hainzl, N. Pavlović, R. Seiringer, Communications on Pure and Applied Mathematics 68 (2015) 1845–1884.
2015 | Journal Article | IST-REx-ID: 1574 |

A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development
Q. Chen, Y. Liu, S. Maere, E. Lee, G. Van Isterdael, Z. Xie, W. Xuan, J. Lucas, V. Vassileva, S. Kitakura, P. Marhavý, K.T. Wabnik, N. Geldner, E. Benková, J. Le, H. Fukaki, E. Grotewold, C. Li, J. Friml, F. Sack, T. Beeckman, S. Vanneste, Nature Communications 6 (2015).
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Q. Chen, Y. Liu, S. Maere, E. Lee, G. Van Isterdael, Z. Xie, W. Xuan, J. Lucas, V. Vassileva, S. Kitakura, P. Marhavý, K.T. Wabnik, N. Geldner, E. Benková, J. Le, H. Fukaki, E. Grotewold, C. Li, J. Friml, F. Sack, T. Beeckman, S. Vanneste, Nature Communications 6 (2015).
2015 | Journal Article | IST-REx-ID: 1575 |

Cell migration and antigen capture are antagonistic processes coupled by myosin II in dendritic cells
M. Chabaud, M. Heuzé, M. Bretou, P. Vargas, P. Maiuri, P. Solanes, M. Maurin, E. Terriac, M. Le Berre, D. Lankar, T. Piolot, R. Adelstein, Y. Zhang, M.K. Sixt, J. Jacobelli, O. Bénichou, R. Voituriez, M. Piel, A. Lennon Duménil, Nature Communications 6 (2015).
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M. Chabaud, M. Heuzé, M. Bretou, P. Vargas, P. Maiuri, P. Solanes, M. Maurin, E. Terriac, M. Le Berre, D. Lankar, T. Piolot, R. Adelstein, Y. Zhang, M.K. Sixt, J. Jacobelli, O. Bénichou, R. Voituriez, M. Piel, A. Lennon Duménil, Nature Communications 6 (2015).
2015 | Journal Article | IST-REx-ID: 1584 |

Reprint of: Weighted straight skeletons in the plane
T. Biedl, M. Held, S. Huber, D. Kaaser, P. Palfrader, Computational Geometry: Theory and Applications 48 (2015) 429–442.
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T. Biedl, M. Held, S. Huber, D. Kaaser, P. Palfrader, Computational Geometry: Theory and Applications 48 (2015) 429–442.
2015 | Journal Article | IST-REx-ID: 1587 |

Quantum interference shifts in laser spectroscopy with elliptical polarization
P. Amaro, F. Fratini, L. Safari, A. Antognini, P. Indelicato, R. Pohl, J. Santos, Physical Review A - Atomic, Molecular, and Optical Physics 92 (2015).
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P. Amaro, F. Fratini, L. Safari, A. Antognini, P. Indelicato, R. Pohl, J. Santos, Physical Review A - Atomic, Molecular, and Optical Physics 92 (2015).
2015 | Journal Article | IST-REx-ID: 1589 |

Magnetic field induced flow pattern reversal in a ferrofluidic Taylor-Couette system
S. Altmeyer, Y. Do, Y. Lai, Scientific Reports 5 (2015).
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S. Altmeyer, Y. Do, Y. Lai, Scientific Reports 5 (2015).
2015 | Book Chapter | IST-REx-ID: 1590 |

Representing directed trees as straight skeletons
O. Aichholzer, T. Biedl, T. Hackl, M. Held, S. Huber, P. Palfrader, B. Vogtenhuber, in:, Graph Drawing and Network Visualization, Springer, 2015, pp. 335–347.
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O. Aichholzer, T. Biedl, T. Hackl, M. Held, S. Huber, P. Palfrader, B. Vogtenhuber, in:, Graph Drawing and Network Visualization, Springer, 2015, pp. 335–347.
2015 | Journal Article | IST-REx-ID: 1577 |

Birth of a new gene on the Y chromosome of Drosophila melanogaster
A. Carvalho, B. Vicoso, C. Russo, B. Swenor, A. Clark, PNAS 112 (2015) 12450–12455.
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A. Carvalho, B. Vicoso, C. Russo, B. Swenor, A. Clark, PNAS 112 (2015) 12450–12455.