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1902 Publications
2014 | Journal Article | IST-REx-ID: 2036 
Selection history and epistatic interactions impact dynamics of adaptation to novel environmental stresses
M. Lagator, N. Colegrave, P. Neve, Proceedings of the Royal Society of London Series B Biological Sciences 281 (2014).
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M. Lagator, N. Colegrave, P. Neve, Proceedings of the Royal Society of London Series B Biological Sciences 281 (2014).
2014 | Journal Article | IST-REx-ID: 2024
Bifurcation of the endocytic pathway into Rab5-dependent and -independent transport to the vacuole
J. Toshima, S. Nishinoaki, Y. Sato, W. Yamamoto, D. Furukawa, D.E. Siekhaus, A. Sawaguchi, J. Toshima, Nature Communications 5 (2014).
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J. Toshima, S. Nishinoaki, Y. Sato, W. Yamamoto, D. Furukawa, D.E. Siekhaus, A. Sawaguchi, J. Toshima, Nature Communications 5 (2014).
2014 | Journal Article | IST-REx-ID: 2168
Coalescent simulation in continuous space: Algorithms for large neighbourhood size
J. Kelleher, A. Etheridge, N.H. Barton, Theoretical Population Biology 95 (2014) 13–23.
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J. Kelleher, A. Etheridge, N.H. Barton, Theoretical Population Biology 95 (2014) 13–23.
2014 | Journal Article | IST-REx-ID: 2170
Likelihood-based inference of population history from low-coverage de novo genome assemblies
J. Hearn, G. Stone, L. Bunnefeld, J. Nicholls, N.H. Barton, K. Lohse, Molecular Ecology 23 (2014) 198–211.
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J. Hearn, G. Stone, L. Bunnefeld, J. Nicholls, N.H. Barton, K. Lohse, Molecular Ecology 23 (2014) 198–211.
2014 | Journal Article | IST-REx-ID: 2175
Monitoring neurogenesis in the cerebral cortex: an update
M.P. Postiglione, S. Hippenmeyer, Future Neurology 9 (2014) 323–340.
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M.P. Postiglione, S. Hippenmeyer, Future Neurology 9 (2014) 323–340.
2014 | Conference Paper | IST-REx-ID: 2219
Simple chosen-ciphertext security from low noise LPN
E. Kiltz, D. Masny, K.Z. Pietrzak, in:, Springer, 2014, pp. 1–18.
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E. Kiltz, D. Masny, K.Z. Pietrzak, in:, Springer, 2014, pp. 1–18.
2014 | Journal Article | IST-REx-ID: 2226
Transient growth of Ekman-Couette flow
L. Shi, B. Hof, A. Tilgner, Physical Review E Statistical Nonlinear and Soft Matter Physics 89 (2014).
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L. Shi, B. Hof, A. Tilgner, Physical Review E Statistical Nonlinear and Soft Matter Physics 89 (2014).
2014 | Conference Paper | IST-REx-ID: 2156
Measuring distance between Reeb graphs
U. Bauer, X. Ge, Y. Wang, in:, Proceedings of the Annual Symposium on Computational Geometry, ACM, 2014, pp. 464–473.
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U. Bauer, X. Ge, Y. Wang, in:, Proceedings of the Annual Symposium on Computational Geometry, ACM, 2014, pp. 464–473.
2014 | Journal Article | IST-REx-ID: 2086
So near and yet so far: Harmonic radar reveals reduced homing ability of Nosema infected honeybees
S. Wolf, D. Mcmahon, K. Lim, C. Pull, S. Clark, R. Paxton, J. Osborne, PLoS One 9 (2014).
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S. Wolf, D. Mcmahon, K. Lim, C. Pull, S. Clark, R. Paxton, J. Osborne, PLoS One 9 (2014).
2014 | Journal Article | IST-REx-ID: 2214
Blood vessels pattern heparan sulfate gradients between their apical and basolateral aspects
L. Stoler Barak, C. Moussion, E. Shezen, M. Hatzav, M.K. Sixt, R. Alon, PLoS One 9 (2014).
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L. Stoler Barak, C. Moussion, E. Shezen, M. Hatzav, M.K. Sixt, R. Alon, PLoS One 9 (2014).
2014 | Journal Article | IST-REx-ID: 2699
Universality of general β-ensembles
L. Erdös, P. Bourgade, H. Yau, Duke Mathematical Journal 163 (2014) 1127–1190.
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L. Erdös, P. Bourgade, H. Yau, Duke Mathematical Journal 163 (2014) 1127–1190.
2014 | Technical Report | IST-REx-ID: 5427
Optimal tree-decomposition balancing and reachability on low treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Optimal Tree-Decomposition Balancing and Reachability on Low Treewidth Graphs, IST Austria, 2014.
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K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Optimal Tree-Decomposition Balancing and Reachability on Low Treewidth Graphs, IST Austria, 2014.
2014 | Report | IST-REx-ID: 5422
Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland
J. Porsche, Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland, none, 2014.
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J. Porsche, Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland, none, 2014.
2014 | Journal Article | IST-REx-ID: 2031
Nanodomain coupling explains Ca^2+ independence of transmitter release time course at a fast central synapse
I. Arai, P.M. Jonas, ELife 3 (2014).
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I. Arai, P.M. Jonas, ELife 3 (2014).
2014 | Journal Article | IST-REx-ID: 1906
Large-scale point-cloud visualization through localized textured surface reconstruction
M. Arikan, R. Preiner, C. Scheiblauer, S. Jeschke, M. Wimmer, IEEE Transactions on Visualization and Computer Graphics 20 (2014) 1280–1292.
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M. Arikan, R. Preiner, C. Scheiblauer, S. Jeschke, M. Wimmer, IEEE Transactions on Visualization and Computer Graphics 20 (2014) 1280–1292.
2014 | Journal Article | IST-REx-ID: 2062
Fast-spiking parvalbumin^+ GABAergic interneurons: From cellular design to microcircuit function
H. Hu, J. Gan, P.M. Jonas, Science 345 (2014).
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H. Hu, J. Gan, P.M. Jonas, Science 345 (2014).
2014 | Journal Article | IST-REx-ID: 1886
Variance predicts salience in central sensory processing
A. Hermundstad, J. Briguglio, M. Conte, J. Victor, V. Balasubramanian, G. Tkacik, ELife (2014).
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A. Hermundstad, J. Briguglio, M. Conte, J. Victor, V. Balasubramanian, G. Tkacik, ELife (2014).
2014 | Journal Article | IST-REx-ID: 2233
Exact and approximate determinization of discounted-sum automata
U. Boker, T.A. Henzinger, Logical Methods in Computer Science 10 (2014).
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U. Boker, T.A. Henzinger, Logical Methods in Computer Science 10 (2014).
2014 | Conference Paper | IST-REx-ID: 2163
Games with a weak adversary
K. Chatterjee, L. Doyen, in:, Lecture Notes in Computer Science, Springer, 2014, pp. 110–121.
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K. Chatterjee, L. Doyen, in:, Lecture Notes in Computer Science, Springer, 2014, pp. 110–121.
2014 | Journal Article | IST-REx-ID: 2187
Synthesizing robust systems
R. Bloem, K. Chatterjee, K. Greimel, T.A. Henzinger, G. Hofferek, B. Jobstmann, B. Könighofer, R. Könighofer, Acta Informatica 51 (2014) 193–220.
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R. Bloem, K. Chatterjee, K. Greimel, T.A. Henzinger, G. Hofferek, B. Jobstmann, B. Könighofer, R. Könighofer, Acta Informatica 51 (2014) 193–220.
2014 | Conference Paper | IST-REx-ID: 1393
Probabilistic programming
A. Gordon, T.A. Henzinger, A. Nori, S. Rajamani, in:, Proceedings of the on Future of Software Engineering, ACM, 2014, pp. 167–181.
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A. Gordon, T.A. Henzinger, A. Nori, S. Rajamani, in:, Proceedings of the on Future of Software Engineering, ACM, 2014, pp. 167–181.
2014 | Journal Article | IST-REx-ID: 1925
A single-molecule approach to explore binding uptake and transport of cancer cell targeting nanotubes
C. Lamprecht, B. Plochberger, V. Ruprecht, S. Wieser, C. Rankl, E. Heister, B. Unterauer, M. Brameshuber, J. Danzberger, P. Lukanov, E. Flahaut, G. Schütz, P. Hinterdorfer, A. Ebner, Nanotechnology 25 (2014) 125704.
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C. Lamprecht, B. Plochberger, V. Ruprecht, S. Wieser, C. Rankl, E. Heister, B. Unterauer, M. Brameshuber, J. Danzberger, P. Lukanov, E. Flahaut, G. Schütz, P. Hinterdorfer, A. Ebner, Nanotechnology 25 (2014) 125704.
2014 | Journal Article | IST-REx-ID: 1913
Patterns of hippocampal tau pathology differentiate neurodegenerative dementias
I. Milenković, T. Petrov, G. Kovács, Dementia and Geriatric Cognitive Disorders 38 (2014) 375–388.
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I. Milenković, T. Petrov, G. Kovács, Dementia and Geriatric Cognitive Disorders 38 (2014) 375–388.
2013 | Conference Paper | IST-REx-ID: 2210
Reconstructing polygons from embedded straight skeletons
T. Biedl, M. Held, S. Huber, in:, 29th European Workshop on Computational Geometry, TU Braunschweig, 2013, pp. 95–98.
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T. Biedl, M. Held, S. Huber, in:, 29th European Workshop on Computational Geometry, TU Braunschweig, 2013, pp. 95–98.
2013 | Journal Article | IST-REx-ID: 2284
Pupal cocoons affect sanitary brood care and limit fungal infections in ant colonies
S. Tragust, L.V. Ugelvig, M. Chapuisat, J. Heinze, S. Cremer, BMC Evolutionary Biology 13 (2013).
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S. Tragust, L.V. Ugelvig, M. Chapuisat, J. Heinze, S. Cremer, BMC Evolutionary Biology 13 (2013).
2013 | Journal Article | IST-REx-ID: 2289
Quantitative reactive modeling and verification
T.A. Henzinger, Computer Science Research and Development 28 (2013) 331–344.
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T.A. Henzinger, Computer Science Research and Development 28 (2013) 331–344.
2013 | Conference Paper | IST-REx-ID: 2291
Cryptographically enforced RBAC
A. Ferrara, G. Fuchsbauer, B. Warinschi, in:, IEEE, 2013, pp. 115–129.
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A. Ferrara, G. Fuchsbauer, B. Warinschi, in:, IEEE, 2013, pp. 115–129.
2013 | Conference Paper | IST-REx-ID: 2258
Digital signatures with minimal overhead from indifferentiable random invertible functions
E. Kiltz, K.Z. Pietrzak, M. Szegedy, 8042 (2013) 571–588.
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E. Kiltz, K.Z. Pietrzak, M. Szegedy, 8042 (2013) 571–588.
2013 | Conference Paper | IST-REx-ID: 2260
Efficient signatures of knowledge and DAA in the standard model
D. Bernhard, G. Fuchsbauer, E. Ghadafi, 7954 (2013) 518–533.
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D. Bernhard, G. Fuchsbauer, E. Ghadafi, 7954 (2013) 518–533.
2013 | Conference Paper | IST-REx-ID: 2272
Inference algorithms for pattern-based CRFs on sequence data
R. Takhanov, V. Kolmogorov, in:, ICML’13 Proceedings of the 30th International Conference on International, International Machine Learning Society, 2013, pp. 145–153.
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R. Takhanov, V. Kolmogorov, in:, ICML’13 Proceedings of the 30th International Conference on International, International Machine Learning Society, 2013, pp. 145–153.
2013 | Journal Article | IST-REx-ID: 2277
Transformation of stimulus correlations by the retina
K. Simmons, J. Prentice, G. Tkacik, J. Homann, H. Yee, S. Palmer, P. Nelson, V. Balasubramanian, PLoS Computational Biology 9 (2013).
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K. Simmons, J. Prentice, G. Tkacik, J. Homann, H. Yee, S. Palmer, P. Nelson, V. Balasubramanian, PLoS Computational Biology 9 (2013).
2013 | Conference Paper | IST-REx-ID: 2518
The power of linear programming for finite-valued CSPs: A constructive characterization
V. Kolmogorov, in:, Springer, 2013, pp. 625–636.
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V. Kolmogorov, in:, Springer, 2013, pp. 625–636.
2013 | Conference Paper | IST-REx-ID: 2520
The supervised IBP: Neighbourhood preserving infinite latent feature models
N. Quadrianto, V. Sharmanska, D. Knowles, Z. Ghahramani, in:, Proceedings of the 29th Conference Uncertainty in Artificial Intelligence, AUAI Press, 2013, pp. 527–536.
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N. Quadrianto, V. Sharmanska, D. Knowles, Z. Ghahramani, in:, Proceedings of the 29th Conference Uncertainty in Artificial Intelligence, AUAI Press, 2013, pp. 527–536.
2013 | Journal Article | IST-REx-ID: 2448
ZIFL1.1 transporter modulates polar auxin transport by stabilizing membrane abundance of multiple PINs in Arabidopsis root tip
E. Remy, P. Baster, J. Friml, P. Duque, Plant Signaling & Behavior 8 (2013).
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E. Remy, P. Baster, J. Friml, P. Duque, Plant Signaling & Behavior 8 (2013).
2013 | Journal Article | IST-REx-ID: 2467
Putting holes in holey geometry: Topology change for arbitrary surfaces
G. Bernstein, C.J. Wojtan, ACM Transactions on Graphics 32 (2013).
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G. Bernstein, C.J. Wojtan, ACM Transactions on Graphics 32 (2013).
2013 | Journal Article | IST-REx-ID: 2412
Probabilistic models for CRISPR spacer content evolution
A. Kupczok, J.P. Bollback, BMC Evolutionary Biology 13 (2013) 54–54.
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A. Kupczok, J.P. Bollback, BMC Evolutionary Biology 13 (2013) 54–54.
2013 | Journal Article | IST-REx-ID: 2828
The complexity of conservative valued CSPs
V. Kolmogorov, S. Živný, Journal of the ACM 60 (2013).
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V. Kolmogorov, S. Živný, Journal of the ACM 60 (2013).
2013 | Journal Article | IST-REx-ID: 2835
Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis
H. Yu, M. Karampelias, S. Robert, W. Peer, R. Swarup, S. Ye, L. Ge, J. Cohen, A. Murphy, J. Friml, M. Estelle, Plant Physiology 162 (2013) 965–976.
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H. Yu, M. Karampelias, S. Robert, W. Peer, R. Swarup, S. Ye, L. Ge, J. Cohen, A. Murphy, J. Friml, M. Estelle, Plant Physiology 162 (2013) 965–976.
2013 | Journal Article | IST-REx-ID: 2842
Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks
N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 105–119.
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N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 105–119.
2013 | Journal Article | IST-REx-ID: 2816
Evolutionary dynamics of cancer in response to targeted combination therapy
I. Božić, J. Reiter, B. Allen, T. Antal, K. Chatterjee, P. Shah, Y. Moon, A. Yaqubie, N. Kelly, D. Le, E. Lipson, P. Chapman, L. Diaz, B. Vogelstein, M. Nowak, ELife 2 (2013).
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I. Božić, J. Reiter, B. Allen, T. Antal, K. Chatterjee, P. Shah, Y. Moon, A. Yaqubie, N. Kelly, D. Le, E. Lipson, P. Chapman, L. Diaz, B. Vogelstein, M. Nowak, ELife 2 (2013).
2013 | Journal Article | IST-REx-ID: 2811
Nature of laminar-turbulence intermittency in shear flows
M. Avila, B. Hof, Physical Review E 87 (2013).
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M. Avila, B. Hof, Physical Review E 87 (2013).
2013 | Journal Article | IST-REx-ID: 2880
Auxin reflux between the endodermis and pericycle promotes lateral root initiation
P. Marhavy, M. Vanstraelen, B. De Rybel, D. Zhaojun, M. Bennett, T. Beeckman, E. Benková, EMBO Journal 32 (2013) 149–158.
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P. Marhavy, M. Vanstraelen, B. De Rybel, D. Zhaojun, M. Bennett, T. Beeckman, E. Benková, EMBO Journal 32 (2013) 149–158.
2013 | Conference Paper | IST-REx-ID: 2948
Beyond dataset bias: Multi-task unaligned shared knowledge transfer
T. Tommasi, N. Quadrianto, B. Caputo, C. Lampert, 7724 (2013) 1–15.
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T. Tommasi, N. Quadrianto, B. Caputo, C. Lampert, 7724 (2013) 1–15.
2013 | Journal Article | IST-REx-ID: 2859
Homology and robustness of level and interlevel sets
P. Bendich, H. Edelsbrunner, D. Morozov, A. Patel, Homology, Homotopy and Applications 15 (2013) 51–72.
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P. Bendich, H. Edelsbrunner, D. Morozov, A. Patel, Homology, Homotopy and Applications 15 (2013) 51–72.
2013 | Journal Article | IST-REx-ID: 509
The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis
S. Di Rubbo, N. Irani, S. Kim, Z. Xu, A. Gadeyne, W. Dejonghe, I. Vanhoutte, G. Persiau, D. Eeckhout, S. Simon, K. Song, J. Kleine Vehn, J. Friml, G. De Jaeger, D. Van Damme, I. Hwang, E. Russinova, Plant Cell 25 (2013) 2986–2997.
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S. Di Rubbo, N. Irani, S. Kim, Z. Xu, A. Gadeyne, W. Dejonghe, I. Vanhoutte, G. Persiau, D. Eeckhout, S. Simon, K. Song, J. Kleine Vehn, J. Friml, G. De Jaeger, D. Van Damme, I. Hwang, E. Russinova, Plant Cell 25 (2013) 2986–2997.
2013 | Journal Article | IST-REx-ID: 516
A map of cell type‐specific auxin responses
B. Bargmann, S. Vanneste, G. Krouk, T. Nawy, I. Efroni, E. Shani, G. Choe, J. Friml, D. Bergmann, M. Estelle, K. Birnbaum, Molecular Systems Biology 9 (2013).
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B. Bargmann, S. Vanneste, G. Krouk, T. Nawy, I. Efroni, E. Shani, G. Choe, J. Friml, D. Bergmann, M. Estelle, K. Birnbaum, Molecular Systems Biology 9 (2013).
2013 | Journal Article | IST-REx-ID: 511
Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid
A. Pěnčík, B. Simonovik, S. Petersson, E. Henyková, S. Simon, K. Greenham, Y. Zhang, M. Kowalczyk, M. Estelle, E. Zažímalová, O. Novák, G. Sandberg, K. Ljung, Plant Cell 25 (2013) 3858–3870.
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A. Pěnčík, B. Simonovik, S. Petersson, E. Henyková, S. Simon, K. Greenham, Y. Zhang, M. Kowalczyk, M. Estelle, E. Zažímalová, O. Novák, G. Sandberg, K. Ljung, Plant Cell 25 (2013) 3858–3870.
2013 | Technical Report | IST-REx-ID: 5409
Edit distance for timed automata
K. Chatterjee, R. Ibsen-Jensen, R. Majumdar, Edit Distance for Timed Automata, IST Austria, 2013.
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K. Chatterjee, R. Ibsen-Jensen, R. Majumdar, Edit Distance for Timed Automata, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 6440
Replacing competition with cooperation to achieve scalable lock-free FIFO queues
T.A. Henzinger, H. Payer, A. Sezgin, Replacing Competition with Cooperation to Achieve Scalable Lock-Free FIFO Queues , IST Austria, 2013.
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T.A. Henzinger, H. Payer, A. Sezgin, Replacing Competition with Cooperation to Achieve Scalable Lock-Free FIFO Queues , IST Austria, 2013.
2013 | Conference Paper | IST-REx-ID: 2847
Structural Counter Abstraction
K. Bansal, E. Koskinen, T. Wies, D. Zufferey, 7795 (2013) 62–77.
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K. Bansal, E. Koskinen, T. Wies, D. Zufferey, 7795 (2013) 62–77.