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1684 Publications


2013 | Journal Article | IST-REx-ID: 2883   OA
Arabidopsis TWISTED DWARF1 functionally interacts with auxin exporter ABCB1 on the root plasma membrane
B. Wang, A. Bailly, M. Zwiewk, S. Henrichs, E. Azzarello, S. Mancuso, M. Maeshima, J. Friml, A. Schulz, M. Geisler, Plant Cell 25 (2013) 202–214.
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2013 | Journal Article | IST-REx-ID: 2908   OA
Does hybridisation influence speciation?
N.H. Barton, Journal of Evolutionary Biology 26 (2013) 267–269.
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2013 | Journal Article | IST-REx-ID: 2910   OA
Coalescent simulation in continuous space
J. Kelleher, N.H. Barton, A. Etheridge, Bioinformatics 29 (2013) 955–956.
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2013 | Journal Article | IST-REx-ID: 2821   OA
A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis
E. Remy, T. Cabrito, P. Baster, R. Batista, M. Teixeira, J. Friml, I. Sá Correia, P. Duque, Plant Cell 25 (2013) 901–926.
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2013 | Journal Article | IST-REx-ID: 2826   OA
Mutations in SCO2 are associated with autosomal-dominant high-grade myopia
K. Tran Viet, C. Powell, V. Barathi, T. Klemm, S. Maurer Stroh, V. Limviphuvadh, V. Soler, C. Ho, T. Yanovitch, G. Schneider, Y. Li, E. Nading, R. Metlapally, S. Saw, L. Goh, S. Rozen, T. Young, American Journal of Human Genetics 92 (2013) 820–826.
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2013 | Journal Article | IST-REx-ID: 2838   OA View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2857   OA
Optical control of ligand-gated ion channels
S. Szobota, C. Mckenzie, H.L. Janovjak, Methods in Molecular Biology 998 (2013) 417–435.
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2013 | Journal Article | IST-REx-ID: 3261   OA
Positional information, in bits
J. Dubuis, G. Tkacik, E. Wieschaus, T. Gregor, W. Bialek, PNAS 110 (2013) 16301–16308.
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2013 | Journal Article | IST-REx-ID: 507   OA
Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis
S. Kim, Z. Xu, K. Song, D. Kim, H. Kang, I. Reichardt, E. Sohn, J. Friml, G. Juergens, I. Hwang, Plant Cell 25 (2013) 2970–2985.
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2013 | Technical Report | IST-REx-ID: 5402   OA
How free is your linearizable concurrent data structure?
T.A. Henzinger, A. Sezgin, How Free Is Your Linearizable Concurrent Data Structure?, IST Austria, 2013.
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2013 | Report | IST-REx-ID: 5407   OA
Technical requirements and features
J. Porsche, Technical Requirements and Features, IST Austria, 2013.
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2013 | Conference Paper | IST-REx-ID: 1385   OA
Synthesizing multiple boolean functions using interpolation on a single proof
G. Hofferek, A. Gupta, B. Könighofer, J. Jiang, R. Bloem, in:, 2013 Formal Methods in Computer-Aided Design, IEEE, 2013, pp. 77–84.
View | DOI | Download (ext.) | arXiv
 

2013 | Conference Paper | IST-REx-ID: 2181   OA
Quantitative relaxation of concurrent data structures
T.A. Henzinger, C. Kirsch, H. Payer, A. Sezgin, A. Sokolova, in:, Proceedings of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language, ACM, 2013, pp. 317–328.
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2013 | Journal Article | IST-REx-ID: 2299   OA
Synthesis of AMBA AHB from formal specification: A case study
Y. Godhal, K. Chatterjee, T.A. Henzinger, International Journal on Software Tools for Technology Transfer 15 (2013) 585–601.
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2013 | Journal Article | IST-REx-ID: 2814   OA
The complexity of coverage
K. Chatterjee, L. Alfaro, R. Majumdar, International Journal of Foundations of Computer Science 24 (2013) 165–185.
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2013 | Conference Paper | IST-REx-ID: 2819   OA
Quantitative timed simulation functions and refinement metrics for real-time systems
K. Chatterjee, V. Prabhu, in:, Proceedings of the 16th International Conference on Hybrid Systems: Computation and Control, Springer, 2013, pp. 273–282.
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2013 | Journal Article | IST-REx-ID: 2282   OA
Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading during zebrafish epiboly
P. Campinho, M. Behrndt, J. Ranft, T. Risler, N. Minc, C.-P.J. Heisenberg, Nature Cell Biology 15 (2013) 1405–1414.
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2013 | Conference Paper | IST-REx-ID: 2446   OA
Automata with generalized Rabin pairs for probabilistic model checking and LTL synthesis
K. Chatterjee, A. Gaiser, J. Kretinsky, 8044 (2013) 559–575.
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2013 | Journal Article | IST-REx-ID: 2290   OA
ECHIDNA mediated post Golgi trafficking of auxin carriers for differential cell elongation
Y. Boutté, K. Jonsson, H. Mcfarlane, E. Johnson, D. Gendre, R. Swarup, J. Friml, L. Samuels, S. Robert, R. Bhalerao, PNAS 110 (2013) 16259–16264.
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2013 | Journal Article | IST-REx-ID: 2264   OA
Neural development is dependent on the function of specificity protein 2 in cell cycle progression
H. Liang, G. Xiao, H. Yin, S. Hippenmeyer, J. Horowitz, T. Ghashghaei, Development 140 (2013) 552–561.
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2013 | Conference Paper | IST-REx-ID: 2276   OA
Potts model, parametric maxflow and k-submodular functions
I. Gridchyn, V. Kolmogorov, in:, IEEE, 2013, pp. 2320–2327.
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2013 | Journal Article | IST-REx-ID: 2466   OA
Highly adaptive liquid simulations on tetrahedral meshes
R. Ando, N. Thuerey, C.J. Wojtan, ACM Transactions on Graphics 32 (2013).
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2013 | Journal Article | IST-REx-ID: 2473   OA
Genetic hitch-hiking in spatially extended populations
N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 75–89.
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2013 | Journal Article | IST-REx-ID: 2808   OA
The moss physcomitrella patens reproductive organ development is highly organized, affected by the two SHI/STY genes and by the level of active auxin in the SHI/STY expression domain
K. Landberg, E. Pederson, T. Viaene, B. Bozorg, J. Friml, H. Jönsson, M. Thelander, E. Sundberg, Plant Physiology 162 (2013) 1406–1419.
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2013 | Journal Article | IST-REx-ID: 2822   OA
3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture
C. Topp, A. Iyer Pascuzzi, J. Anderson, C. Lee, P. Zurek, O. Symonova, Y. Zheng, A. Bucksch, Y. Mileyko, T. Galkovskyi, B. Moore, J. Harer, H. Edelsbrunner, T. Mitchell Olds, J. Weitz, P. Benfey, PNAS 110 (2013) E1695–E1704.
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2013 | Journal Article | IST-REx-ID: 2827   OA
Salicylic acid interferes with clathrin-mediated endocytic protein trafficking
Y. Du, R. Tejos, M. Beck, E. Himschoot, H. Li, S. Robatzek, S. Vanneste, J. Friml, PNAS 110 (2013) 7946–7951.
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2013 | Journal Article | IST-REx-ID: 2834   OA
Streamwise-localized solutions at the onset of turbulence in pipe flow
M. Avila, F. Mellibovsky, N. Roland, B. Hof, Physical Review Letters 110 (2013).
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2013 | Journal Article | IST-REx-ID: 2810   OA
Environmental dependence of genetic constraint
M. De Vos, F. Poelwijk, N. Battich, J. Ndika, S. Tans, PLoS Genetics 9 (2013).
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2013 | Journal Article | IST-REx-ID: 2846   OA
Sex differences in host defence interfere with parasite-mediated selection for outcrossing during host-parasite coevolution
L. El Masri, R. Schulte, N. Timmermeyer, S. Thanisch, L. Crummenerl, G. Jansen, N. Michiels, H. Schulenburg, Ecology Letters 16 (2013) 461–468.
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2013 | Journal Article | IST-REx-ID: 2860   OA
Dynamic reconfiguration of hippocampal interneuron circuits during spatial learning
D. Dupret, J. O’Neill, J.L. Csicsvari, Neuron 78 (2013) 166–180.
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2013 | Journal Article | IST-REx-ID: 2909   OA
Modelling evolution in a spatial continuum
N.H. Barton, A. Etheridge, A. Véber, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
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2013 | Journal Article | IST-REx-ID: 2853   OA
Altruism can evolve when relatedness is low: Evidence from bacteria committing suicide upon phage infection
D. Refardt, T. Bergmiller, R. Kümmerli, Proceedings of the Royal Society of London Series B Biological Sciences 280 (2013).
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2013 | Journal Article | IST-REx-ID: 476   OA View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 508   OA
Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications
E. Tarazona Santos, M. Machado, W. Magalhães, R. Chen, F. Lyon, L. Burdett, A. Crenshaw, C. Fabbri, L. Pereira, L. Pinto, R.A. Fernandes Redondo, B. Sestanovich, M. Yeager, S. Chanock, Molecular Biology and Evolution 30 (2013) 2157–2167.
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2013 | Technical Report | IST-REx-ID: 5403   OA
Qualitative analysis of concurrent mean-payoff games
K. Chatterjee, R. Ibsen-Jensen, Qualitative Analysis of Concurrent Mean-Payoff Games, IST Austria, 2013.
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2013 | Conference Paper | IST-REx-ID: 1374   OA
Infinite-state games with finitary conditions
K. Chatterjee, N. Fijalkow, in:, 22nd EACSL Annual Conference on Computer Science Logic, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013, pp. 181–196.
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2013 | Conference Paper | IST-REx-ID: 2000   OA
TTP: Tool for tumor progression
J. Reiter, I. Božić, K. Chatterjee, M. Nowak, in:, Proceedings of 25th Int. Conf. on Computer Aided Verification, Springer, 2013, pp. 101–106.
View | Files available | DOI | Download (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 2858   OA
The effect of one additional driver mutation on tumor progression
J. Reiter, I. Božić, B. Allen, K. Chatterjee, M. Nowak, Evolutionary Applications 6 (2013) 34–45.
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2013 | Conference Paper | IST-REx-ID: 2295   OA View | Files available | DOI
 

2012 | Conference Paper | IST-REx-ID: 2049   OA
Lapin: An efficient authentication protocol based on ring-LPN
S. Heyse, E. Kiltz, V. Lyubashevsky, C. Paar, K.Z. Pietrzak, in:, Conference Proceedings FSE 2012, Springer, 2012, pp. 346–365.
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2012 | Journal Article | IST-REx-ID: 2943   OA
Variation of the folding and dynamics of the Escherichia coli chromosome with growth conditions
N. Hadizadeh Yazdi, C.C. Guet, R. Johnson, J. Marko, Molecular Microbiology 86 (2012) 1318–1333.
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2012 | Conference Paper | IST-REx-ID: 2974   OA
Commitments and efficient zero knowledge proofs from learning parity with noise
A. Jain, S. Krenn, K.Z. Pietrzak, A. Tentes, in:, X. Wang, K. Sako (Eds.), Springer, 2012, pp. 663–680.
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2012 | Journal Article | IST-REx-ID: 2962   OA
A novel approach for choosing summary statistics in approximate Bayesian computation
S. Aeschbacher, M. Beaumont, A. Futschik, Genetics 192 (2012) 1027–1047.
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2012 | Conference Paper | IST-REx-ID: 3155   OA
Synchronous interface theories and time triggered scheduling
B. Delahaye, U. Fahrenberg, T.A. Henzinger, A. Legay, D. Nickovic, in:, Springer, 2012, pp. 203–218.
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2012 | Conference Paper | IST-REx-ID: 3129   OA
Annotating simplices with a homology basis and its applications
O. Busaryev, S. Cabello, C. Chen, T. Dey, Y. Wang, in:, Springer, 2012, pp. 189–200.
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2012 | Journal Article | IST-REx-ID: 3131   OA
Limits to the rate of adaptive substitution in sexual populations
D. Weissman, N.H. Barton, PLoS Genetics 8 (2012).
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2012 | Journal Article | IST-REx-ID: 3117   OA
Minimizing a sum of submodular functions
V. Kolmogorov, Discrete Applied Mathematics 160 (2012) 2246–2258.
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2012 | Journal Article | IST-REx-ID: 3256   OA
Dual complexes of cubical subdivisions of ℝn
H. Edelsbrunner, M. Kerber, Discrete & Computational Geometry 47 (2012) 393–414.
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2012 | Conference Paper | IST-REx-ID: 3282   OA
Message authentication, revisited
Y. Dodis, K.Z. Pietrzak, E. Kiltz, D. Wichs, in:, Springer, 2012, pp. 355–374.
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2012 | Technical Report | IST-REx-ID: 5396   OA
Approximating marginals using discrete energy minimization
F. Korc, V. Kolmogorov, C. Lampert, Approximating Marginals Using Discrete Energy Minimization, IST Austria, 2012.
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