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4934 Publications


2017 | Journal Article | IST-REx-ID: 686
D'Arcy Thompson's ‘on growth and form’: From soap bubbles to tissue self organization
C.-P.J. Heisenberg, Mechanisms of Development 145 (2017) 32–37.
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2017 | Journal Article | IST-REx-ID: 689
Rett syndrome modeling goes simian
G. Novarino, Science Translational Medicine 9 (2017).
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2017 | Journal Article | IST-REx-ID: 693 | OA
Numbers of presynaptic Ca2+ channel clusters match those of functionally defined vesicular docking sites in single central synapses
T. Miki, W. Kaufmann, G. Malagon, L. Gomez, K. Tabuchi, M. Watanabe, R. Shigemoto, A. Marty, PNAS 114 (2017) E5246–E5255.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 694 | OA
A dual phenotype of MDA MB 468 cancer cells reveals mutual regulation of tensin3 and adhesion plasticity
A. Veß, U. Blache, L. Leitner, A. Kurz, A. Ehrenpfordt, M.K. Sixt, G. Posern, Journal of Cell Science 130 (2017) 2172–2184.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2017 | Conference Paper | IST-REx-ID: 697 | OA
Non uniform attacks against pseudoentropy
K.Z. Pietrzak, M. Skórski, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 698 | OA
Orientation and repositioning of chromosomes correlate with cell geometry dependent gene expression
Y. Wang, M. Nagarajan, C. Uhler, G. Shivashankar, Molecular Biology of the Cell 28 (2017) 1997–2009.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 699 | OA
The red queen and king in finite populations
C. Veller, L. Hayward, M. Nowak, C. Hilbe, PNAS 114 (2017) E5396–E5405.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 700 | OA
Optomechanical proposal for monitoring microtubule mechanical vibrations
S. Barzanjeh, V. Salari, J. Tuszynski, M. Cifra, C. Simon, Physical Review E Statistical Nonlinear and Soft Matter Physics 96 (2017).
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2017 | Journal Article | IST-REx-ID: 701 | OA
On the nonexistence of k reptile simplices in ℝ^3 and ℝ^4
J. Kynčl, Z. Patakova, The Electronic Journal of Combinatorics 24 (2017) 1–44.
[Submitted Version] View | Files available
 

2017 | Journal Article | IST-REx-ID: 702
The riddle of CHD8 haploinsufficiency in autism spectrum disorder
G. Novarino, Science Translational Medicine 9 (2017) eaao0972.
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2017 | Journal Article | IST-REx-ID: 706
Roles of afadin in functional differentiations of hippocampal mossy fiber synapse
X. Geng, T. Maruo, K. Mandai, I. Supriyanto, M. Miyata, S. Sakakibara, A. Mizoguchi, Y. Takai, M. Mori, Genes to Cells 22 (2017) 715–722.
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2017 | Journal Article | IST-REx-ID: 707 | OA
A tight estimate for the waist of the ball
A. Akopyan, R. Karasev, Bulletin of the London Mathematical Society 49 (2017) 690–693.
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2017 | Journal Article | IST-REx-ID: 708 | OA
Different patterns of neuronal activity trigger distinct responses of oligodendrocyte precursor cells in the corpus callosum
B. Nagy, A. Hovhannisyan, R. Barzan, T. Chen, M. Kukley, PLoS Biology 15 (2017).
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 709
Gene expression changes of thermo sensitive transient receptor potential channels in obese mice
W. Sun, C. Li, Y. Zhang, C. Jiang, M.-Z. Zhai, Q. Zhou, L. Xiao, Q. Deng, Cell Biology International 41 (2017) 908–913.
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2017 | Conference Paper | IST-REx-ID: 710 | OA
Renyi entropy estimation revisited
M. Obremski, M. Skórski, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 713 | OA
Mapping the mouse Allelome reveals tissue specific regulation of allelic expression
D. Andergassen, C. Dotter, D. Wenzel, V. Sigl, P. Bammer, M. Muckenhuber, D. Mayer, T. Kulinski, H. Theussl, J. Penninger, C. Bock, D. Barlow, F. Pauler, Q. Hudson, ELife 6 (2017).
[Published Version] View | Files available | DOI
 

2017 | Conference Paper | IST-REx-ID: 711 | OA
Bidirectional nested weighted automata
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 712 | OA
Weak–strong uniqueness of solutions to entropy dissipating reaction–diffusion equations
J.L. Fischer, Nonlinear Analysis: Theory, Methods and Applications 159 (2017) 181–207.
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2017 | Journal Article | IST-REx-ID: 714 | OA
HIV Tat excites D1 receptor-like expressing neurons from rat nucleus accumbens
G. Brailoiu, E. Deliu, J. Barr, L. Console Bram, A. Ciuciu, M. Abood, E. Unterwald, E. Brǎiloiu, Drug and Alcohol Dependence 178 (2017) 7–14.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 715
More excitation for Rett syndrome
G. Novarino, Science Translational Medicine 9 (2017).
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2017 | Journal Article | IST-REx-ID: 716 | OA
The complexity of mean-payoff pushdown games
K. Chatterjee, Y. Velner, Journal of the ACM 64 (2017) 34.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 717 | OA
Hyperplane separation technique for multidimensional mean-payoff games
K. Chatterjee, Y. Velner, Journal of Computer and System Sciences 88 (2017) 236–259.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 

2017 | Journal Article | IST-REx-ID: 719
Special issue: Synthesis and SYNT 2014
K. Chatterjee, R. Ehlers, Acta Informatica 54 (2017) 543–544.
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2017 | Journal Article | IST-REx-ID: 720 | OA
Probabilistic models for neural populations that naturally capture global coupling and criticality
J. Humplik, G. Tkačik, PLoS Computational Biology 13 (2017).
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 721 | OA
Singularities of solutions to quadratic vector equations on the complex upper half plane
O.H. Ajanki, T.H. Krüger, L. Erdös, Communications on Pure and Applied Mathematics 70 (2017) 1672–1705.
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2017 | Journal Article | IST-REx-ID: 722 | OA
Shaping 3D root system architecture
E. Morris, M. Griffiths, A. Golebiowska, S. Mairhofer, J. Burr Hersey, T. Goh, D. von Wangenheim, B. Atkinson, C. Sturrock, J. Lynch, K. Vissenberg, K. Ritz, D. Wells, S. Mooney, M. Bennett, Current Biology 27 (2017) R919–R930.
[Submitted Version] View | Files available | DOI | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 725 | OA
Discrete modes of social information processing predict individual behavior of fish in a group
R. Harpaz, G. Tkačik, E. Schneidman, PNAS 114 (2017) 10149–10154.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 724 | OA
Noninteracting central site model localization and logarithmic entanglement growth
D. Hetterich, M. Serbyn, F. Domínguez, F. Pollmann, B. Trauzettel, Physical Review B 96 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 

2017 | Journal Article | IST-REx-ID: 731
The science of love in ASD and ADHD
G. Novarino, Science Translational Medicine 9 (2017).
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2017 | Journal Article | IST-REx-ID: 7360 | OA
A synthetic mammalian therapeutic gene circuit for sensing and suppressing inflammation
A. Smole, D. Lainšček, U. Bezeljak, S. Horvat, R. Jerala, Molecular Therapy 25 (2017) 102–119.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2017 | Conference Paper | IST-REx-ID: 750
Optimal geospatial volunteer allocation needs realistic distances
J. Pielorz, M. Prandtstetter, M. Straub, C. Lampert, in:, 2017 IEEE International Conference on Big Data, IEEE, 2017, pp. 3760–3763.
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2017 | Journal Article | IST-REx-ID: 795 | OA
Unified Hanani Tutte theorem
R. Fulek, J. Kynčl, D. Pálvölgyi, Electronic Journal of Combinatorics 24 (2017).
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 797
Photonenblockade aufgelöst
J.M. Fink, Physik in Unserer Zeit 48 (2017) 111–113.
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2017 | Journal Article | IST-REx-ID: 807 | OA
Der Springer Compact-Deal – Ein erster Einblick in die Evaluierung einer Offsetting-Vereinbarung
M. Andrae, M. Villányi, Mitteilungen Der Vereinigung Österreichischer Bibliothekarinnen Und Bibliothekare 70 (2017) 274–280.
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2017 | Journal Article | IST-REx-ID: 825 | OA
Metadata for research data in practice
B. Petritsch, Mitteilungen Der Vereinigung Österreichischer Bibliothekarinnen & Bibliothekare 70 (2017) 200–207.
[Published Version] View | Files available | DOI
 

2017 | Book Chapter | IST-REx-ID: 957
Ancestral protein reconstruction and circular permutation for improving the stability and dynamic range of FRET sensors
B. Clifton, J. Whitfield, I. Sanchez-Romero, M. Herde, C. Henneberger, H.L. Janovjak, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 71–87.
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2017 | Conference Paper | IST-REx-ID: 963 | OA
Timed network games with clocks
G. Avni, S. Guha, O. Kupferman, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9709 | OA
Data from: Error-robust modes of the retinal population code
J. Prentice, O. Marre, M. Ioffe, A. Loback, G. Tkačik, M. Berry, (2017).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2017 | Journal Article | IST-REx-ID: 541 | OA
Cell-to-cell variation and specialization in sugar metabolism in clonal bacterial populations
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, PLoS Genetics 13 (2017).
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9847 | OA
Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification
M. Pleska, C.C. Guet, (2017).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2017 | Research Data Reference | IST-REx-ID: 9845
Mathematical model
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
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2017 | Research Data Reference | IST-REx-ID: 9849
Modelling and simulation details
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9850
Extensions of the model
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9846
Supplementary methods
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 680 | OA
Sensory noise predicts divisive reshaping of receptive fields
M.J. Chalk, P. Masset, B. Gutkin, S. Denève, PLoS Computational Biology 13 (2017).
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9851
Heuristic prediction for multiple stresses
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9852
Resistance frequencies for different combination strategies
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9855
Supplementary appendix
M.J. Chalk, P. Masset, B. Gutkin, S. Denève, (2017).
[Published Version] View | Files available | DOI
 

2017 | Conference Paper | IST-REx-ID: 941
JFIX: Semantics-based repair of Java programs via symbolic PathFinder
X. Le, D.H. Chu, D. Lo, C. Le Goues, W. Visser, in:, Proceedings of the 26th ACM SIGSOFT International Symposium on Software Testing and Analysis, ACM, 2017, pp. 376–379.
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2017 | Book Chapter | IST-REx-ID: 958
Method for developing optical sensors using a synthetic dye fluorescent protein FRET pair and computational modeling and assessment
J. Mitchell, W. Zhang, M. Herde, C. Henneberger, H.L. Janovjak, M. O’Mara, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 89–99.
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