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3934 Publications
2015 | Journal Article | IST-REx-ID: 2025 |

The yeast Arf-GAP Glo3p is required for the endocytic recycling of cell surface proteins
D. Kawada, H. Kobayashi, T. Tomita, E. Nakata, M. Nagano, D.E. Siekhaus, J. Toshima, J. Toshimaa, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 144–156.
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D. Kawada, H. Kobayashi, T. Tomita, E. Nakata, M. Nagano, D.E. Siekhaus, J. Toshima, J. Toshimaa, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 144–156.
2015 | Journal Article | IST-REx-ID: 2030 |

A hybrid MPI-OpenMP parallel implementation for pseudospectral simulations with application to Taylor-Couette flow
L. Shi, M. Rampp, B. Hof, M. Avila, Computers and Fluids 106 (2015) 1–11.
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L. Shi, M. Rampp, B. Hof, M. Avila, Computers and Fluids 106 (2015) 1–11.
2015 | Journal Article | IST-REx-ID: 2034 |

Probabilistic opacity for Markov decision processes
B. Bérard, K. Chatterjee, N. Sznajder, Information Processing Letters 115 (2015) 52–59.
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B. Bérard, K. Chatterjee, N. Sznajder, Information Processing Letters 115 (2015) 52–59.
2015 | Journal Article | IST-REx-ID: 2035 |

The persistent homology of a self-map
H. Edelsbrunner, G. Jablonski, M. Mrozek, Foundations of Computational Mathematics 15 (2015) 1213–1244.
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H. Edelsbrunner, G. Jablonski, M. Mrozek, Foundations of Computational Mathematics 15 (2015) 1213–1244.
2015 | Journal Article | IST-REx-ID: 2085 |

Collective excitations of Bose gases in the mean-field regime
P. Nam, R. Seiringer, Archive for Rational Mechanics and Analysis 215 (2015) 381–417.
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P. Nam, R. Seiringer, Archive for Rational Mechanics and Analysis 215 (2015) 381–417.
2015 | Journal Article | IST-REx-ID: 2166 |

The Altshuler-Shklovskii formulas for random band matrices I: the unimodular case
L. Erdös, A. Knowles, Communications in Mathematical Physics 333 (2015) 1365–1416.
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L. Erdös, A. Knowles, Communications in Mathematical Physics 333 (2015) 1365–1416.
2015 | Journal Article | IST-REx-ID: 2271 |

The power of linear programming for general-valued CSPs
V. Kolmogorov, J. Thapper, S. Živný, SIAM Journal on Computing 44 (2015) 1–36.
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| arXiv
V. Kolmogorov, J. Thapper, S. Živný, SIAM Journal on Computing 44 (2015) 1–36.
2015 | Research Data Reference | IST-REx-ID: 9711
Excel file containing the raw data for all figures
G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D.H. Ayhan, E. Toprak, M.T. Bollenbach, (2015).
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G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D.H. Ayhan, E. Toprak, M.T. Bollenbach, (2015).
2015 | Research Data Reference | IST-REx-ID: 9712
Other fitness models for comparison & for interacting TFBSs
M. Tugrul, T. Paixao, N.H. Barton, G. Tkačik, (2015).
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M. Tugrul, T. Paixao, N.H. Barton, G. Tkačik, (2015).
2015 | Research Data Reference | IST-REx-ID: 9714
An exploration of the universe of polyglutamine structures - submission to PLOS journals
À. Gómez Sicilia, M.K. Sikora, M. Cieplak, M. Carrión Vázquez, (2015).
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À. Gómez Sicilia, M.K. Sikora, M. Cieplak, M. Carrión Vázquez, (2015).
2015 | Research Data Reference | IST-REx-ID: 9715
Mathematical inference of the results
B. Trubenova, S. Novak, R. Hager, (2015).
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B. Trubenova, S. Novak, R. Hager, (2015).
2015 | Research Data Reference | IST-REx-ID: 9718
Supporting information text
T. Friedlander, A.E. Mayo, T. Tlusty, U. Alon, (2015).
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T. Friedlander, A.E. Mayo, T. Tlusty, U. Alon, (2015).
2015 | Research Data Reference | IST-REx-ID: 9719
Data from: Adaptation to parasites and costs of parasite resistance in mutator and non-mutator bacteria
S. Wielgoss, T. Bergmiller, A.M. Bischofberger, A.R. Hall, (2015).
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S. Wielgoss, T. Bergmiller, A.M. Bischofberger, A.R. Hall, (2015).
2015 | Research Data Reference | IST-REx-ID: 9721
Data from: Opposing effects of allogrooming on disease transmission in ant societies
F. Theis, L.V. Ugelvig, C. Marr, S. Cremer, (2015).
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F. Theis, L.V. Ugelvig, C. Marr, S. Cremer, (2015).
2015 | Research Data Reference | IST-REx-ID: 9737
Root traits computed by DynamicRoots for the maize root shown in fig 2
O. Symonova, C. Topp, H. Edelsbrunner, (2015).
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O. Symonova, C. Topp, H. Edelsbrunner, (2015).
2015 | Research Data Reference | IST-REx-ID: 9765
Gene ontology enrichment analysis for the most sensitive gene deletion strains for all drugs
G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D.H. Ayhan, E. Toprak, M.T. Bollenbach, (2015).
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G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D.H. Ayhan, E. Toprak, M.T. Bollenbach, (2015).
2015 | Research Data Reference | IST-REx-ID: 9772
Description of the agent based simulations
B. Trubenova, S. Novak, R. Hager, (2015).
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B. Trubenova, S. Novak, R. Hager, (2015).
2015 | Research Data Reference | IST-REx-ID: 9773
Evolutionary simulation code
T. Friedlander, A.E. Mayo, T. Tlusty, U. Alon, (2015).
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T. Friedlander, A.E. Mayo, T. Tlusty, U. Alon, (2015).
2015 | Conference Paper | IST-REx-ID: 1651 |

Anonymous transferable e-cash
F. Baldimtsi, M. Chase, G. Fuchsbauer, M. Kohlweiss, in:, Public-Key Cryptography - PKC 2015, Springer, 2015, pp. 101–124.
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F. Baldimtsi, M. Chase, G. Fuchsbauer, M. Kohlweiss, in:, Public-Key Cryptography - PKC 2015, Springer, 2015, pp. 101–124.
2015 | Journal Article | IST-REx-ID: 1532
Auxin-modulated root growth inhibition in Arabidopsis thaliana seedlings with ammonium as the sole nitrogen source
H. Yang, J. Von Der Fecht Bartenbach, J. Friml, J. Lohmann, B. Neuhäuser, U. Ludewig, Functional Plant Biology 42 (2015) 239–251.
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| DOI
| PubMed | Europe PMC
H. Yang, J. Von Der Fecht Bartenbach, J. Friml, J. Lohmann, B. Neuhäuser, U. Ludewig, Functional Plant Biology 42 (2015) 239–251.
2015 | Preprint | IST-REx-ID: 8183 |

Eliminating higher-multiplicity intersections, III. Codimension 2
S. Avvakumov, I. Mabillard, A. Skopenkov, U. Wagner, ArXiv (n.d.).
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| arXiv
S. Avvakumov, I. Mabillard, A. Skopenkov, U. Wagner, ArXiv (n.d.).
2015 | Conference Paper | IST-REx-ID: 1672 |

Incoercible multi-party computation and universally composable receipt-free voting
J.F. Alwen, R. Ostrovsky, H. Zhou, V. Zikas, in:, Advances in Cryptology - CRYPTO 2015, Springer, 2015, pp. 763–780.
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J.F. Alwen, R. Ostrovsky, H. Zhou, V. Zikas, in:, Advances in Cryptology - CRYPTO 2015, Springer, 2015, pp. 763–780.
2015 | Journal Article | IST-REx-ID: 1993 |

Anti-pathogen protection versus survival costs mediated by an ectosymbiont in an ant host
M. Konrad, A.V. Grasse, S. Tragust, S. Cremer, Proceedings of the Royal Society of London Series B Biological Sciences 282 (2015).
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| PubMed | Europe PMC
M. Konrad, A.V. Grasse, S. Tragust, S. Cremer, Proceedings of the Royal Society of London Series B Biological Sciences 282 (2015).
2015 | Journal Article | IST-REx-ID: 1851 |

Evolutionarily stable mating decisions for sequentially searching females and the stability of reproductive isolation by assortative mating
T. Priklopil, E. Kisdi, M. Gyllenberg, Evolution 69 (2015) 1015–1026.
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| PubMed | Europe PMC
T. Priklopil, E. Kisdi, M. Gyllenberg, Evolution 69 (2015) 1015–1026.
2015 | Book Chapter | IST-REx-ID: 1531
Visualizing symmetric indefinite 2D tensor fields using The Heat Kernel Signature
V. Zobel, J. Reininghaus, I. Hotz, in:, I. Hotz, T. Schultz (Eds.), Visualization and Processing of Higher Order Descriptors for Multi-Valued Data, 1st ed., Springer, 2015, pp. 257–267.
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V. Zobel, J. Reininghaus, I. Hotz, in:, I. Hotz, T. Schultz (Eds.), Visualization and Processing of Higher Order Descriptors for Multi-Valued Data, 1st ed., Springer, 2015, pp. 257–267.
2015 | Research Data Reference | IST-REx-ID: 9742
Data from: Increased grooming after repeated brood care provides sanitary benefits in a clonal ant
C. Westhus, L.V. Ugelvig, E. Tourdot, J. Heinze, C. Doums, S. Cremer, (2015).
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C. Westhus, L.V. Ugelvig, E. Tourdot, J. Heinze, C. Doums, S. Cremer, (2015).
2015 | Conference Paper | IST-REx-ID: 1661 |

Improved algorithms for one-pair and k-pair Streett objectives
K. Chatterjee, M.H. Henzinger, V. Loitzenbauer, in:, Proceedings - Symposium on Logic in Computer Science, IEEE, 2015.
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K. Chatterjee, M.H. Henzinger, V. Loitzenbauer, in:, Proceedings - Symposium on Logic in Computer Science, IEEE, 2015.
2015 | Journal Article | IST-REx-ID: 1619 |

Quantifying the determinants of evolutionary dynamics leading to drug resistance
G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D. Ayhan, E. Toprak, M.T. Bollenbach, PLoS Biology 13 (2015).
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G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D. Ayhan, E. Toprak, M.T. Bollenbach, PLoS Biology 13 (2015).
2014 | Journal Article | IST-REx-ID: 2852
Robust multi-property combiners for hash functions
M. Fischlin, A. Lehmann, K.Z. Pietrzak, Journal of Cryptology 27 (2014) 397–428.
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M. Fischlin, A. Lehmann, K.Z. Pietrzak, Journal of Cryptology 27 (2014) 397–428.
2014 | Conference Paper | IST-REx-ID: 2905 |

Persistent homology: Theory and practice
H. Edelsbrunner, D. Morozovy, in:, European Mathematical Society Publishing House, 2014, pp. 31–50.
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H. Edelsbrunner, D. Morozovy, in:, European Mathematical Society Publishing House, 2014, pp. 31–50.
2014 | Journal Article | IST-REx-ID: 3263 |

Adaptation to changes in higher-order stimulus statistics in the salamander retina
G. Tkačik, A. Ghosh, E. Schneidman, R. Segev, PLoS One 9 (2014).
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G. Tkačik, A. Ghosh, E. Schneidman, R. Segev, PLoS One 9 (2014).
2014 | Conference Paper | IST-REx-ID: 8044 |

Structure of the excitation spectrum for many-body quantum systems
R. Seiringer, in:, Proceeding of the International Congress of Mathematicans, Kyung Moon SA, 2014, pp. 1175–1194.
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R. Seiringer, in:, Proceeding of the International Congress of Mathematicans, Kyung Moon SA, 2014, pp. 1175–1194.
2014 | Journal Article | IST-REx-ID: 8500
Arnol′d diffusion in a pendulum lattice
V. Kaloshin, M. Levi, M. Saprykina, Communications on Pure and Applied Mathematics 67 (2014) 748–775.
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V. Kaloshin, M. Levi, M. Saprykina, Communications on Pure and Applied Mathematics 67 (2014) 748–775.
2014 | Journal Article | IST-REx-ID: 468 |

Invasive parasites habitat change and heavy rainfall reduce breeding success in Darwin's finches
A. Cimadom, A. Ulloa, P. Meidl, M. Zöttl, E. Zöttl, B. Fessl, E. Nemeth, M. Dvorak, F. Cunninghame, S. Tebbich, PLoS One 9 (2014).
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A. Cimadom, A. Ulloa, P. Meidl, M. Zöttl, E. Zöttl, B. Fessl, E. Nemeth, M. Dvorak, F. Cunninghame, S. Tebbich, PLoS One 9 (2014).
2014 | Conference Paper | IST-REx-ID: 475 |

First cycle games
B. Aminof, S. Rubin, in:, Electronic Proceedings in Theoretical Computer Science, EPTCS, Open Publishing Association, 2014, pp. 83–90.
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B. Aminof, S. Rubin, in:, Electronic Proceedings in Theoretical Computer Science, EPTCS, Open Publishing Association, 2014, pp. 83–90.
2014 | Journal Article | IST-REx-ID: 537 |

Fitness consequences of maternal and grandmaternal effects
R. Prizak, T. Ezard, R. Hoyle, Ecology and Evolution 4 (2014) 3139–3145.
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R. Prizak, T. Ezard, R. Hoyle, Ecology and Evolution 4 (2014) 3139–3145.
2014 | Technical Report | IST-REx-ID: 5411 |

Compositional specifications for IOCO testing
P. Daca, T.A. Henzinger, W. Krenn, D. Nickovic, Compositional Specifications for IOCO Testing, IST Austria, 2014.
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P. Daca, T.A. Henzinger, W. Krenn, D. Nickovic, Compositional Specifications for IOCO Testing, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5412 |

CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
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K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5413 |

CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
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K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5414 |

CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
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K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5415 |

Nested weighted automata
K. Chatterjee, T.A. Henzinger, J. Otop, Nested Weighted Automata, IST Austria, 2014.
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K. Chatterjee, T.A. Henzinger, J. Otop, Nested Weighted Automata, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5416 |

Model measuring for hybrid systems
T.A. Henzinger, J. Otop, Model Measuring for Hybrid Systems, IST Austria, 2014.
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T.A. Henzinger, J. Otop, Model Measuring for Hybrid Systems, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5417 |

From model checking to model measuring
T.A. Henzinger, J. Otop, From Model Checking to Model Measuring, IST Austria, 2014.
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T.A. Henzinger, J. Otop, From Model Checking to Model Measuring, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5418 |

Games with a weak adversary
K. Chatterjee, L. Doyen, Games with a Weak Adversary, IST Austria, 2014.
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K. Chatterjee, L. Doyen, Games with a Weak Adversary, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5419 |

Improved algorithms for reachability and shortest path on low tree-width graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Improved Algorithms for Reachability and Shortest Path on Low Tree-Width Graphs, IST Austria, 2014.
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K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Improved Algorithms for Reachability and Shortest Path on Low Tree-Width Graphs, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5420 |

The value 1 problem for concurrent mean-payoff games
K. Chatterjee, R. Ibsen-Jensen, The Value 1 Problem for Concurrent Mean-Payoff Games, IST Austria, 2014.
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K. Chatterjee, R. Ibsen-Jensen, The Value 1 Problem for Concurrent Mean-Payoff Games, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5421 |

The complexity of evolution on graphs
K. Chatterjee, R. Ibsen-Jensen, M. Nowak, The Complexity of Evolution on Graphs, IST Austria, 2014.
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K. Chatterjee, R. Ibsen-Jensen, M. Nowak, The Complexity of Evolution on Graphs, IST Austria, 2014.
2014 | Report | IST-REx-ID: 5422 |

Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland
J. Porsche, Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland, none, 2014.
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J. Porsche, Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland, none, 2014.
2014 | Technical Report | IST-REx-ID: 5423 |

A framework for automated competitive analysis of on-line scheduling of firm-deadline tasks
K. Chatterjee, A. Kössler, A. Pavlogiannis, U. Schmid, A Framework for Automated Competitive Analysis of On-Line Scheduling of Firm-Deadline Tasks, IST Austria, 2014.
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| DOI
K. Chatterjee, A. Kössler, A. Pavlogiannis, U. Schmid, A Framework for Automated Competitive Analysis of On-Line Scheduling of Firm-Deadline Tasks, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5424 |

Qualitative analysis of POMDPs with temporal logic specifications for robotics applications
K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, Qualitative Analysis of POMDPs with Temporal Logic Specifications for Robotics Applications, IST Austria, 2014.
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K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, Qualitative Analysis of POMDPs with Temporal Logic Specifications for Robotics Applications, IST Austria, 2014.