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3560 Publications


2014 | Book Chapter | IST-REx-ID: 2245
S. Simon, P. Skůpa, P. Dobrev, J. Petrášek, E. Zažímalová, and J. Friml, “Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters,” in Plant Chemical Genomics, vol. 1056, G. Hicks and S. Robert, Eds. Springer, 2014, pp. 255–264.
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2014 | Journal Article | IST-REx-ID: 2246 | OA
A. Grinshpun, P. Phalitnonkiat, S. Rubin, and A. Tarfulea, “Alternating traps in Muller and parity games,” Theoretical Computer Science, vol. 521. Elsevier, pp. 73–91, 2014.
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2014 | Journal Article | IST-REx-ID: 2248
D. Capek, B. Metscher, and G. Müller, “Thumbs down: A molecular-morphogenetic approach to avian digit homology,” Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, vol. 322, no. 1. Wiley-Blackwell, pp. 1–12, 2014.
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2014 | Journal Article | IST-REx-ID: 2249 | OA
Y. Chen, K. Aung, J. Rolčík, K. Walicki, J. Friml, and F. Brandizzí, “Inter-regulation of the unfolded protein response and auxin signaling,” Plant Journal, vol. 77, no. 1. Wiley-Blackwell, pp. 97–107, 2014.
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2014 | Journal Article | IST-REx-ID: 2250 | OA
D. Kuchibhatla et al., “Powerful sequence similarity search methods and in-depth manual analyses can identify remote homologs in many apparently ‘orphan’ viral proteins,” Journal of Virology, vol. 88, no. 1. ASM, pp. 10–20, 2014.
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2014 | Journal Article | IST-REx-ID: 2251 | OA
J. L. Csicsvari and D. Dupret, “Sharp wave/ripple network oscillations and learning-associated hippocampal maps,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 369, no. 1635. Royal Society, The, 2014.
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2014 | Journal Article | IST-REx-ID: 2252
S. Phadke, T. Paixao, T. Pham, S. Pham, and R. Zufall, “Genetic background alters dominance relationships between mat alleles in the ciliate Tetrahymena Thermophila,” Journal of Heredity, vol. 105, no. 1. Oxford University Press, pp. 130–135, 2014.
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2014 | Journal Article | IST-REx-ID: 2253 | OA
A. Bailly et al., “Expression of TWISTED DWARF1 lacking its in-plane membrane anchor leads to increased cell elongation and hypermorphic growth,” Plant Journal, vol. 77, no. 1. Wiley-Blackwell, pp. 108–118, 2014.
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2014 | Journal Article | IST-REx-ID: 2254 | OA
A. Pernia-Andrade and P. M. Jonas, “Theta-gamma-modulated synaptic currents in hippocampal granule cells in vivo define a mechanism for network oscillations,” Neuron, vol. 81, no. 1. Elsevier, pp. 140–152, 2014.
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2014 | Journal Article | IST-REx-ID: 2255 | OA
H. Edelsbrunner and F. Pausinger, “Stable length estimates of tube-like shapes,” Journal of Mathematical Imaging and Vision, vol. 50, no. 1. Springer, pp. 164–177, 2014.
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2014 | Journal Article | IST-REx-ID: 2257 | OA
G. Tkačik, O. Marre, D. Amodei, E. Schneidman, W. Bialek, and M. Berry, “Searching for collective behavior in a large network of sensory neurons,” PLoS Computational Biology, vol. 10, no. 1. Public Library of Science, 2014.
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2014 | Journal Article | IST-REx-ID: 2261 | OA
F. Zhu et al., “DICE, an efficient system for iterative genomic editing in human pluripotent stem cells,” Nucleic Acids Research, vol. 42, no. 5. Oxford University Press, 2014.
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2014 | Book Chapter | IST-REx-ID: 2265
S. Hippenmeyer, “Molecular pathways controlling the sequential steps of cortical projection neuron migration,” in Cellular and Molecular Control of Neuronal Migration, vol. 800, L. Nguyen, Ed. Springer, 2014, pp. 1–24.
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2014 | Conference Paper | IST-REx-ID: 2275 | OA
C. Olsson, J. Ulen, Y. Boykov, and V. Kolmogorov, “Partial enumeration and curvature regularization,” presented at the ICCV: International Conference on Computer Vision, Sydney, Australia, 2014, pp. 2936–2943.
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2014 | Journal Article | IST-REx-ID: 2285 | OA
J. Hosp et al., “Morpho-physiological criteria divide dentate gyrus interneurons into classes,” Hippocampus, vol. 23, no. 2. Wiley-Blackwell, pp. 189–203, 2014.
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2014 | Journal Article | IST-REx-ID: 2699 | OA
L. Erdös, P. Bourgade, and H. Yau, “Universality of general β-ensembles,” Duke Mathematical Journal, vol. 163, no. 6. Duke University Press, pp. 1127–1190, 2014.
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2014 | Journal Article | IST-REx-ID: 2716 | OA
K. Chatterjee, M. Randour, and J. Raskin, “Strategy synthesis for multi-dimensional quantitative objectives,” Acta Informatica, vol. 51, no. 3–4. Springer, pp. 129–163, 2014.
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2014 | Journal Article | IST-REx-ID: 2028 | OA
K. Bod’ová, D. Paydarfar, and D. Forger, “Characterizing spiking in noisy type II neurons,” Journal of Theoretical Biology, vol. 365. Academic Press, pp. 40–54, 2014.
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2014 | Conference Paper | IST-REx-ID: 2218 | OA
P. Cerny, T. A. Henzinger, A. Radhakrishna, L. Ryzhyk, and T. Tarrach, “Regression-free synthesis for concurrency,” presented at the CAV: Computer Aided Verification, Vienna, Austria, 2014, vol. 8559, pp. 568–584.
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2014 | Journal Article | IST-REx-ID: 1999
N. Stroeymeyt, B. E. Casillas Perez, and S. Cremer, “Organisational immunity in social insects,” Current Opinion in Insect Science, vol. 5, no. 1. Elsevier, pp. 1–15, 2014.
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2013 | Journal Article | IST-REx-ID: 8245 | OA
B. Petricevic et al., “Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients,” Journal of Translational Medicine, vol. 11. Springer Nature, 2013.
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2013 | Journal Article | IST-REx-ID: 827 | OA
J. O’Brien and E. Benková, “Cytokinin cross talking during biotic and abiotic stress responses,” Frontiers in Plant Science, vol. 4. Frontiers Research Foundation, 2013.
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2013 | Journal Article | IST-REx-ID: 828 | OA
C. Cuesta, K. T. Wabnik, and E. Benková, “Systems approaches to study root architecture dynamics,” Frontiers in Plant Science, vol. 4. Frontiers Research Foundation, 2013.
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2013 | Journal Article | IST-REx-ID: 8462
E. Rennella et al., “Oligomeric states along the folding pathways of β2-microglobulin: Kinetics, thermodynamics, and structure,” Journal of Molecular Biology, vol. 425, no. 15. Elsevier, pp. 2722–2736, 2013.
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2013 | Journal Article | IST-REx-ID: 2806
K. Avila and B. Hof, “High-precision Taylor-Couette experiment to study subcritical transitions and the role of boundary conditions and size effects,” Review of Scientific Instruments, vol. 84, no. 6. American Institute of Physics, 2013.
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2013 | Conference Paper | IST-REx-ID: 2807 | OA
M. Čadek, M. Krcál, J. Matoušek, L. Vokřínek, and U. Wagner, “Extending continuous maps: Polynomiality and undecidability,” in 45th Annual ACM Symposium on theory of computing, Palo Alto, CA, United States, 2013, pp. 595–604.
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2013 | Journal Article | IST-REx-ID: 2808 | OA
K. Landberg et al., “The moss physcomitrella patens reproductive organ development is highly organized, affected by the two SHI/STY genes and by the level of active auxin in the SHI/STY expression domain,” Plant Physiology, vol. 162, no. 3. American Society of Plant Biologists, pp. 1406–1419, 2013.
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2013 | Journal Article | IST-REx-ID: 2810 | OA
M. de Vos, F. Poelwijk, N. Battich, J. Ndika, and S. Tans, “Environmental dependence of genetic constraint,” PLoS Genetics, vol. 9, no. 6. Public Library of Science, 2013.
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2013 | Journal Article | IST-REx-ID: 2811 | OA
M. Avila and B. Hof, “Nature of laminar-turbulence intermittency in shear flows,” Physical Review E, vol. 87, no. 6. American Institute of Physics, 2013.
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2013 | Conference Paper | IST-REx-ID: 2812 | OA
D. Attali, U. Bauer, O. Devillers, M. Glisse, and A. Lieutier, “Homological reconstruction and simplification in R3,” in Proceedings of the 29th annual symposium on Computational Geometry, Rio de Janeiro, Brazil, 2013, pp. 117–125.
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2013 | Journal Article | IST-REx-ID: 2813 | OA
D. Samanta et al., “Elasto-inertial turbulence,” PNAS, vol. 110, no. 26. National Academy of Sciences, pp. 10557–10562, 2013.
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2013 | Journal Article | IST-REx-ID: 2814 | OA
K. Chatterjee, L. Alfaro, and R. Majumdar, “The complexity of coverage,” International Journal of Foundations of Computer Science, vol. 24, no. 2. World Scientific Publishing, pp. 165–185, 2013.
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2013 | Journal Article | IST-REx-ID: 2815
H. Edelsbrunner, B. T. Fasy, and G. Rote, “Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions,” Discrete & Computational Geometry, vol. 49, no. 4. Springer, pp. 797–822, 2013.
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2013 | Journal Article | IST-REx-ID: 2816 | OA
I. Božić et al., “Evolutionary dynamics of cancer in response to targeted combination therapy,” eLife, vol. 2. eLife Sciences Publications, 2013.
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2013 | Journal Article | IST-REx-ID: 2817 | OA
S. Novak, K. Chatterjee, and M. Nowak, “Density games,” Journal of Theoretical Biology, vol. 334. Elsevier, pp. 26–34, 2013.
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2013 | Journal Article | IST-REx-ID: 2818 | OA
K. Rajan, O. Marre, and G. Tkačik, “Learning quadratic receptive fields from neural responses to natural stimuli,” Neural Computation, vol. 25, no. 7. MIT Press , pp. 1661–1692, 2013.
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2013 | Conference Paper | IST-REx-ID: 2819 | OA
K. Chatterjee and V. Prabhu, “Quantitative timed simulation functions and refinement metrics for real-time systems,” in Proceedings of the 16th International Conference on Hybrid Systems: Computation and Control, Philadelphia, PA USA, 2013, vol. 1, pp. 273–282.
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2013 | Conference Paper | IST-REx-ID: 2820
K. Chatterjee, A. Kößler, and U. Schmid, “Automated analysis of real-time scheduling using graph games,” in Proceedings of the 16th International conference on Hybrid systems: Computation and control, Philadelphia, PA, United States, 2013, pp. 163–172.
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2013 | Journal Article | IST-REx-ID: 2821 | OA
E. Remy et al., “A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis,” Plant Cell, vol. 25, no. 3. American Society of Plant Biologists, pp. 901–926, 2013.
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2013 | Journal Article | IST-REx-ID: 2822 | OA
C. Topp et al., “3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture,” PNAS, vol. 110, no. 18. National Academy of Sciences, pp. E1695–E1704, 2013.
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2013 | Journal Article | IST-REx-ID: 2823
M. Pickup et al., “Post-fire recovery of revegetated woodland communities in south-eastern Australia,” Austral Ecology, vol. 38, no. 3. Wiley-Blackwell, pp. 300–312, 2013.
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2013 | Journal Article | IST-REx-ID: 2824
K. Chatterjee and V. Prabhu, “Synthesis of memory-efficient, clock-memory free, and non-Zeno safety controllers for timed systems,” Information and Computation, vol. 228–229. Elsevier, pp. 83–119, 2013.
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2013 | Journal Article | IST-REx-ID: 2826 | OA
K. Tran Viet et al., “Mutations in SCO2 are associated with autosomal-dominant high-grade myopia,” American Journal of Human Genetics, vol. 92, no. 5. Cell Press, pp. 820–826, 2013.
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2013 | Journal Article | IST-REx-ID: 2827 | OA
Y. Du et al., “Salicylic acid interferes with clathrin-mediated endocytic protein trafficking,” PNAS, vol. 110, no. 19. National Academy of Sciences, pp. 7946–7951, 2013.
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2013 | Journal Article | IST-REx-ID: 2828 | OA
V. Kolmogorov and S. Živný, “The complexity of conservative valued CSPs,” Journal of the ACM, vol. 60, no. 2. ACM, 2013.
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2013 | Journal Article | IST-REx-ID: 2829 | OA
L. Shi, M. Avila, and B. Hof, “Scale invariance at the onset of turbulence in couette flow,” Physical Review Letters, vol. 110, no. 20. American Physical Society, 2013.
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2013 | Journal Article | IST-REx-ID: 2830
C. Moussion and M. K. Sixt, “A conduit to amplify innate immunity,” Immunity, vol. 38, no. 5. Cell Press, pp. 853–854, 2013.
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2013 | Journal Article | IST-REx-ID: 2831 | OA
K. Chatterjee, M. Henzinger, M. Joglekar, and N. Shah, “Symbolic algorithms for qualitative analysis of Markov decision processes with Büchi objectives,” Formal Methods in System Design, vol. 42, no. 3. Springer, pp. 301–327, 2013.
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2013 | Journal Article | IST-REx-ID: 2832 | OA
H. Tanaka et al., “Cell polarity and patterning by PIN trafficking through early endosomal compartments in arabidopsis thaliana,” PLoS Genetics, vol. 9, no. 5. Public Library of Science, 2013.
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2013 | Journal Article | IST-REx-ID: 2833
C.-P. J. Heisenberg and Y. Bellaïche, “Forces in tissue morphogenesis and patterning,” Cell, vol. 153, no. 5. Cell Press, pp. 948–962, 2013.
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