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4934 Publications


2018 | Conference Paper | IST-REx-ID: 141 | OA
Symbolic algorithms for graphs and Markov decision processes with fairness objectives
K. Chatterjee, M.H. Henzinger, V. Loitzenbauer, S. Oraee, V. Toman, in:, Springer, 2018, pp. 178–197.
[Published Version] View | Files available | DOI | WoS
 

2018 | Conference Paper | IST-REx-ID: 298 | OA
Sustained space complexity
J.F. Alwen, J. Blocki, K.Z. Pietrzak, in:, Springer, 2018, pp. 99–130.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 36 | OA
Temperature-induced changes in the wheat phosphoproteome reveal temperature-regulated interconversion of phosphoforms
L. Vu, T. Zhu, I. Verstraeten, B. Van De Cotte, K. Gevaert, I. De Smet, Journal of Experimental Botany 69 (2018) 4609–4624.
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 326 | OA
Super resolution structural analysis of dendritic spines using three-dimensional structured illumination microscopy in cleared mouse brain slices
K. Sawada, R. Kawakami, R. Shigemoto, T. Nemoto, European Journal of Neuroscience 47 (2018) 1033–1042.
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 5770 | OA
Structure and architecture of immature and mature murine leukemia virus capsids
K. Qu, B. Glass, M. Doležal, F.K. Schur, B. Murciano, A. Rein, M. Rumlová, T. Ruml, H.-G. Kräusslich, J.A.G. Briggs, Proceedings of the National Academy of Sciences 115 (2018) E11751–E11760.
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2018 | Journal Article | IST-REx-ID: 608 | OA
Synthesis from component libraries with costs
G. Avni, O. Kupferman, Theoretical Computer Science 712 (2018) 50–72.
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2018 | Journal Article | IST-REx-ID: 705
Super resolution microscopical localization of dopamine receptors 1 and 2 in rat hippocampal synaptosomes
A. Miklosi, G. Del Favero, T. Bulat, H. Höger, R. Shigemoto, D. Marko, G. Lubec, Molecular Neurobiology 55 (2018) 4857 – 4869.
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2018 | Journal Article | IST-REx-ID: 148 | OA
The Chara genome: Secondary complexity and implications for plant terrestrialization
Nishiyama T, Sakayama H, De Vries J, Buschmann H, Saint Marcoux D, Ullrich K, Haas F, Vanderstraeten L, Becker D, Lang D, Vosolsobě S, Rombauts S, Wilhelmsson P, Janitza P, Kern R, Heyl A, Rümpler F, Calderón Villalobos L, Clay J, Skokan R, Toyoda A, Suzuki Y, Kagoshima H, Schijlen E, Tajeshwar N, Catarino B, Hetherington A, Saltykova A, Bonnot C, Breuninger H, Symeonidi A, Radhakrishnan G, Van Nieuwerburgh F, Deforce D, Chang C, Karol K, Hedrich R, Ulvskov P, Glöckner G, Delwiche C, Petrášek J, Van De Peer Y, Friml J, Beilby M, Dolan L, Kohara Y, Sugano S, Fujiyama A, Delaux PM, Quint M, Theissen G, Hagemann M, Harholt J, Dunand C, Zachgo S, Langdale J, Maumus F, Van Der Straeten D, Gould SB, Rensing S. 2018. The Chara genome: Secondary complexity and implications for plant terrestrialization. Cell. 174(2), 448–464.e24.
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2018 | Journal Article | IST-REx-ID: 403 | OA
The cyclin‐dependent kinase G group defines a thermo‐sensitive alternative splicing circuit modulating the expression of Arabidopsis ATU 2AF 65A
N. Cavallari, C. Nibau, A. Fuchs, D. Dadarou, A. Barta, J. Doonan, The Plant Journal 94 (2018) 1010–1022.
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2018 | Conference Paper | IST-REx-ID: 156 | OA
The compound interest in relaxing punctuality
T. Ferrere, in:, Springer, 2018, pp. 147–164.
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2018 | Journal Article | IST-REx-ID: 104 | OA
The core effector Cce1 is required for early infection of maize by Ustilago maydis
D. Seitner, S. Uhse, M.C. Gallei, A. Djamei, Molecular Plant Pathology 19 (2018) 2277–2287.
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2018 | Journal Article | IST-REx-ID: 40 | OA
The consequences of an introgression event
N.H. Barton, Molecular Ecology 27 (2018) 4973–4975.
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2018 | Journal Article | IST-REx-ID: 5861 | OA
The cell sets the tone
J.H. Alanko, M.K. Sixt, ELife 7 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 147 | OA
The inhibitor Endosidin 4 targets SEC7 domain-type ARF GTPase exchange factors and interferes with sub cellular trafficking in eukaryotes
U. Kania, T. Nodzyński, Q. Lu, G.R. Hicks, W. Nerinckx, K. Mishev, F. Peurois, J. Cherfils, R.R.M. De, P. Grones, S. Robert, E. Russinova, J. Friml, The Plant Cell 30 (2018) 2553–2572.
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2018 | Journal Article | IST-REx-ID: 146 | OA
The dynamics of root cap sloughing in Arabidopsis is regulated by peptide signalling
C.L. Shi, D. von Wangenheim, U. Herrmann, M. Wildhagen, I. Kulik, A. Kopf, T. Ishida, V. Olsson, M.K. Anker, M. Albert, M.A. Butenko, G. Felix, S. Sawa, M. Claassen, J. Friml, R.B. Aalen, Nature Plants 4 (2018) 596–604.
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 293 | OA
The signal-burying game can explain why we obscure positive traits and good deeds
M. Hoffman, C. Hilbe, M. Nowak, Nature Human Behaviour 2 (2018) 397–404.
[Submitted Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 455 | OA
The Dirac–Frenkel principle for reduced density matrices and the Bogoliubov–de Gennes equations
N.P. Benedikter, J. Sok, J. Solovej, Annales Henri Poincare 19 (2018) 1167–1214.
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2018 | Journal Article | IST-REx-ID: 314 | OA
The science of living matter for tomorrow
G. Bauer, N. Fakhri, A. Kicheva, J. Kondev, K. Kruse, H. Noji, D. Riveline, T. Saunders, M. Thatta, E. Wieschaus, Cell Systems 6 (2018) 400–402.
[Published Version] View | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 565 | OA
The spread of an inversion with migration and selection
B. Charlesworth, N.H. Barton, Genetics 208 (2018) 377–382.
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2018 | Journal Article | IST-REx-ID: 446 | OA
The ionization conjecture in Thomas–Fermi–Dirac–von Weizsäcker theory
R. Frank, P. Nam, H. Van Den Bosch, Communications on Pure and Applied Mathematics 71 (2018) 577–614.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 430 | OA
Tread lightly interpreting polygenic tests of selection
J. Novembre, N.H. Barton, Genetics 208 (2018) 1351–1355.
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 199 | OA
Tissue specificity and dynamics of sex biased gene expression in a common frog population with differentiated, yet homomorphic, sex chromosomes
W. Ma, P. Veltsos, M.A. Toups, N. Rodrigues, R. Sermier, D. Jeffries, N. Perrin, Genes 9 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 543 | OA
Toward a unified theory of efficient, predictive, and sparse coding
M.J. Chalk, O. Marre, G. Tkačik, PNAS 115 (2018) 186–191.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

2018 | Journal Article | IST-REx-ID: 421 | OA
Theory of eppithelial cell shape transitions induced by mechanoactive chemical gradients
K. Dasbiswas, E.B. Hannezo, N. Gov, Biophysical Journal 114 (2018) 968–977.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 63 | OA
Unusual diversity of sex chromosomes in African cichlid fishes
W.J. Gammerdinger, T. Kocher, Genes 9 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 296 | OA
Weak ergodicity breaking from quantum many-body scars
C. Turner, A. Michailidis, D. Abanin, M. Serbyn, Z. Papić, Nature Physics 14 (2018) 745–749.
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2018 | Journal Article | IST-REx-ID: 607 | OA
Well posedness and maximum entropy approximation for the dynamics of quantitative traits
K. Bodova, J. Haskovec, P. Markowich, Physica D: Nonlinear Phenomena 376–377 (2018) 108–120.
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2018 | Journal Article | IST-REx-ID: 294 | OA
Two-photon processes based on quantum commutators
F. Fratini, L. Safari, P. Amaro, J. Santos, Physical Review A - Atomic, Molecular, and Optical Physics 97 (2018).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 606 | OA
Well-posedness for mean-field evolutions arising in superconductivity
M. Duerinckx, J.L. Fischer, Annales de l’Institut Henri Poincare (C) Non Linear Analysis 35 (2018) 1267–1319.
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2018 | Conference Paper | IST-REx-ID: 5959 | OA
Keynote: The first-order logic of signals
A. Bakhirkin, T. Ferrere, T.A. Henzinger, D. Nickovicl, in:, 2018 International Conference on Embedded Software, IEEE, 2018, pp. 1–10.
[Published Version] View | Files available | DOI | WoS
 

2018 | Conference Paper | IST-REx-ID: 5962 | OA
The convergence of stochastic gradient descent in asynchronous shared memory
D.-A. Alistarh, C. De Sa, N.H. Konstantinov, in:, Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing  - PODC ’18, ACM Press, 2018, pp. 169–178.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 5860 | OA
Zipf's Law, unbounded complexity and open-ended evolution
B. Corominas-Murtra, L.F. Seoane, R. Solé, Journal of the Royal Society Interface 15 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Conference Paper | IST-REx-ID: 5961
A brief tutorial on distributed and concurrent machine learning
D.-A. Alistarh, in:, Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing  - PODC ’18, ACM Press, 2018, pp. 487–488.
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2018 | Journal Article | IST-REx-ID: 5960 | OA
Proving the existence of loops in robot trajectories
S. Rohou, P. Franek, C. Aubry, L. Jaulin, The International Journal of Robotics Research 37 (2018) 1500–1516.
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2018 | Conference Paper | IST-REx-ID: 5963 | OA
Relaxed schedulers can efficiently parallelize iterative algorithms
D.-A. Alistarh, T.A. Brown, J. Kopinsky, G. Nadiradze, in:, Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing  - PODC ’18, ACM Press, 2018, pp. 377–386.
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2018 | Conference Paper | IST-REx-ID: 5965 | OA
Distributionally linearizable data structures
D.-A. Alistarh, T.A. Brown, J. Kopinsky, J.Z. Li, G. Nadiradze, in:, Proceedings of the 30th on Symposium on Parallelism in Algorithms and Architectures  - SPAA ’18, ACM Press, 2018, pp. 133–142.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Conference Paper | IST-REx-ID: 5967 | OA
The Big Match with a clock and a bit of memory
K.A. Hansen, R. Ibsen-Jensen, A. Neyman, in:, Proceedings of the 2018 ACM Conference on Economics and Computation  - EC ’18, ACM Press, 2018, pp. 149–150.
[Submitted Version] View | Files available | DOI | WoS
 

2018 | Conference Paper | IST-REx-ID: 5966 | OA
The transactional conflict problem
D.-A. Alistarh, S.K. Haider, R. Kübler, G. Nadiradze, in:, Proceedings of the 30th on Symposium on Parallelism in Algorithms and Architectures  - SPAA ’18, ACM Press, 2018, pp. 383–392.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 5975 | OA
Commutativity in the algorithmic Lovász local lemma
V. Kolmogorov, SIAM Journal on Computing 47 (2018) 2029–2056.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Conference Paper | IST-REx-ID: 5964 | OA
Brief Announcement: Performance prediction for coarse-grained locking
V. Aksenov, D.-A. Alistarh, P. Kuznetsov, in:, Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing  - PODC ’18, ACM Press, 2018, pp. 411–413.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

2018 | Journal Article | IST-REx-ID: 5971 | OA
Bounds on the norm of Wigner-type random matrices
L. Erdös, P. Mühlbacher, Random Matrices: Theory and Applications (2018).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 5984 | OA
Optical functionalization of human class A orphan G-protein-coupled receptors
M. Morri, I. Sanchez-Romero, A.-M. Tichy, S. Kainrath, E.J. Gerrard, P. Hirschfeld, J. Schwarz, H.L. Janovjak, Nature Communications 9 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 5976 | OA
FlexMaps: Computational design of flat flexible shells for shaping 3D objects
L. Malomo, J. Perez Rodriguez, E. Iarussi, N. Pietroni, E. Miguel, P. Cignoni, B. Bickel, ACM Transactions on Graphics 37 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 5983 | OA
Theory of the rotating polaron: Spectrum and self-localization
E. Yakaboylu, B. Midya, A. Deuchert, N.K. Leopold, M. Lemeshko, Physical Review B 98 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 5982 | OA
Tin diselenide molecular precursor for solution-processable thermoelectric materials
Y. Zhang, Y. Liu, K.H. Lim, C. Xing, M. Li, T. Zhang, P. Tang, J. Arbiol, J. Llorca, K.M. Ng, M. Ibáñez, P. Guardia, M. Prato, D. Cadavid, A. Cabot, Angewandte Chemie International Edition 57 (2018) 17063–17068.
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2018 | Conference Paper | IST-REx-ID: 5978 | OA
Exact MAP-inference by confining combinatorial search with LP relaxation
S. Haller, P. Swoboda, B. Savchynskyy, in:, Proceedings of the 32st AAAI Conference on Artificial Intelligence, AAAI Press, 2018, pp. 6581–6588.
[Preprint] View | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 5990 | OA
Josephson effect in a few-hole quantum dot
J. Ridderbos, M. Brauns, J. Shen, F.K. de Vries, A. Li, E.P.A.M. Bakkers, A. Brinkman, F.A. Zwanenburg, Advanced Materials 30 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 5980
Private set-intersection with common set-up
S. Chatterjee, C. Kamath Hosdurg, V. Kumar, American Institute of Mathematical Sciences 12 (2018) 17–47.
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2018 | Journal Article | IST-REx-ID: 5998 | OA
Genome amplification and cellular senescence are hallmarks of human placenta development
Velicky P, Meinhardt G, Plessl K, Vondra S, Weiss T, Haslinger P, Lendl T, Aumayr K, Mairhofer M, Zhu X, Schütz B, Hannibal RL, Lindau R, Weil B, Ernerudh J, Neesen J, Egger G, Mikula M, Röhrl C, Urban AE, Baker J, Knöfler M, Pollheimer J. 2018. Genome amplification and cellular senescence are hallmarks of human placenta development. PLOS Genetics. 14(10), e1007698.
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 5995 | OA
Self-consistency test reveals systematic bias in programs for prediction change of stability upon mutation
D.R. Usmanova, N.S. Bogatyreva, J. Ariño Bernad, A.A. Eremina, A.A. Gorshkova, G.M. Kanevskiy, L.R. Lonishin, A.V. Meister, A.G. Yakupova, F. Kondrashov, D. Ivankov, Bioinformatics 34 (2018) 3653–3658.
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