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2814 Publications


2011 | Journal Article | IST-REx-ID: 3372 | OA
P. Abbot et al., “Inclusive fitness theory and eusociality,” Nature, vol. 471, no. 7339, pp. E1–E4, 2011.
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2011 | Journal Article | IST-REx-ID: 3364 | OA
F. Didier, T. A. Henzinger, M. Mateescu, and V. Wolf, “Approximation of event probabilities in noisy cellular processes,” Theoretical Computer Science, vol. 412, no. 21, pp. 2128–2141, 2011.
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and R. Singh, “QUASY: quantitative synthesis tool,” presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Saarbrucken, Germany, 2011, vol. 6605, pp. 267–271.
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2011 | Journal Article | IST-REx-ID: 3381 | OA
T. A. Henzinger, B. Jobstmann, and V. Wolf, “Formalisms for specifying Markovian population models,” IJFCS: International Journal of Foundations of Computer Science, vol. 22, no. 4, pp. 823–841, 2011.
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2011 | Journal Article | IST-REx-ID: 3965
B. Wang, H. Edelsbrunner, and D. Morozov, “Computing elevation maxima by searching the Gauss sphere,” Journal of Experimental Algorithmics, vol. 16, no. 2.2, pp. 1–13, 2011.
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2011 | Journal Article | IST-REx-ID: 490 | OA
A. Schlögl, C. Vidaurre, and T. Sander, “BioSig: The free and open source software library for biomedical signal processing,” Computational Intelligence and Neuroscience, vol. 2011, 2011.
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2011 | Journal Article | IST-REx-ID: 491
A. Eichner and M. K. Sixt, “Setting the clock for recirculating lymphocytes,” Science Signaling, vol. 4, no. 198, 2011.
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2011 | Journal Article | IST-REx-ID: 469 | OA
N. Vyleta and S. Smith, “Spontaneous glutamate release is independent of calcium influx and tonically activated by the calcium-sensing receptor,” European Journal of Neuroscience, vol. 31, no. 12, pp. 4593–4606, 2011.
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2011 | Journal Article | IST-REx-ID: 518 | OA
D. Schraivogel et al., “CAMTA1 is a novel tumour suppressor regulated by miR-9/9 * in glioblastoma stem cells,” EMBO Journal, vol. 30, no. 20, pp. 4309–4322, 2011.
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2011 | Journal Article | IST-REx-ID: 531 | OA
R. Guerraoui, T. A. Henzinger, and V. Singh, “Verification of STM on relaxed memory models,” Formal Methods in System Design, vol. 39, no. 3, pp. 297–331, 2011.
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2011 | Journal Article | IST-REx-ID: 6496 | OA
H. Park, P. Oikonomou, C. C. Guet, and P. Cluzel, “Noise underlies switching behavior of the bacterial flagellum,” Biophysical Journal, vol. 101, no. 10, pp. 2336–2340, 2011.
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2010 | Book Chapter | IST-REx-ID: 4339 | OA
J. Bergmann and P. Danowski, “Ist Bibliothek 2.0 überhaupt noch relevant? – Eine Einleitung in das Handbuch,” in Handbuch Bibliothek 2.0, J. Bergmann and P. Danowski, Eds. De Gruyter, 2010, pp. 5–20.
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2010 | Book | IST-REx-ID: 4346 | OA
P. Danowski and J. Bergmann, Handbuch Bibliothek 2.0. De Gruyter, 2010.
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2010 | Conference Paper | IST-REx-ID: 4382 | OA
R. Guerraoui, T. A. Henzinger, M. Kapalka, and V. Singh, “Transactions in the jungle,” presented at the SPAA: ACM Symposium on Parallel Algorithms and Architectures, Santorini, Greece, 2010, pp. 263–272.
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2010 | Conference Paper | IST-REx-ID: 4390 | OA
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, “Model checking of linearizability of concurrent list implementations,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 465–479.
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2010 | Technical Report | IST-REx-ID: 5390 | OA
K. Chatterjee and N. Fijalkow, Topological, automata-theoretic and logical characterization of finitary languages. IST Austria, 2010.
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2010 | Technical Report | IST-REx-ID: 5391 | OA
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, Model checking of linearizability of concurrent list implementations. IST Austria, 2010.
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2010 | Conference Paper | IST-REx-ID: 3850
E. Berberich, D. Halperin, M. Kerber, and R. Pogalnikova, “Polygonal reconstruction from approximate offsets,” presented at the EuroCG: European Workshop on Computational Geometry, Dortmund, Germany, 2010, pp. 12–23.
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2010 | Conference (Editor) | IST-REx-ID: 3859
K. Chatterjee and T. A. Henzinger, Eds., Formal modeling and analysis of timed systems, vol. 6246. Springer, 2010.
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2010 | Thesis | IST-REx-ID: 3962
H. Pflicke,   Dendritic cell migration across basement membranes in the skin. IST Austria, 2010.
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2010 | Technical Report | IST-REx-ID: 5388 | OA
K. Chatterjee, P. Cerny, T. A. Henzinger, A. Radhakrishna, and R. Singh, Quantitative synthesis for concurrent programs. IST Austria, 2010.
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2010 | Journal Article | IST-REx-ID: 2409 | OA
A. Kupczok, H. Schmidt, and A. Von Haeseler, “Accuracy of phylogeny reconstruction methods combining overlapping gene data sets ,” Algorithms for Molecular Biology, vol. 5, no. 1, 2010.
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2010 | Journal Article | IST-REx-ID: 3303 | OA
D. Weissman, M. Feldman, and D. Fisher, “The rate of fitness-valley crossing in sexual populations,” Genetics, vol. 186, no. 4, pp. 1389–1410, 2010.
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2010 | Conference Paper | IST-REx-ID: 3719 | OA
J. Feret, T. A. Henzinger, H. Koeppl, and T. Petrov, “Lumpability abstractions of rule-based systems,” presented at the MECBIC: Membrane Computing and Biologically Inspired Process Calculi, Jena, Germany, 2010, vol. 40, pp. 142–161.
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2010 | Journal Article | IST-REx-ID: 3772 | OA
N. H. Barton, “Understanding adaptation in large populations,” PLoS Genetics, vol. 6, no. 6, 2010.
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2010 | Journal Article | IST-REx-ID: 3773 | OA
N. H. Barton, “What role does natural selection play in speciation?,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 365, no. 1547, pp. 1825–1840, 2010.
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2010 | Journal Article | IST-REx-ID: 3774
H. Senn, G. Swanson, S. Goodman, N. H. Barton, and J. Pemberton, “Phenotypic correlates of hybridisation between red and sika deer (genus Cervus),” Journal of Animal Ecology, vol. 79, no. 2, pp. 414–425, 2010.
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2010 | Journal Article | IST-REx-ID: 3776 | OA
N. H. Barton, “Genetic linkage and natural selection,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 365, no. 1552, pp. 2559–2569, 2010.
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2010 | Journal Article | IST-REx-ID: 3777 | OA
N. H. Barton, “Mutation and the evolution of recombination,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 365, no. 1544, pp. 1281–1294, 2010.
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2010 | Journal Article | IST-REx-ID: 3779 | OA
U. Rosas, N. H. Barton, L. Copsey, P. Barbier De Reuille, and E. Coen, “Cryptic variation between species and the basis of hybrid performance,” PLoS Biology, vol. 8, no. 7, 2010.
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2010 | Conference Paper | IST-REx-ID: 3782
C. Chen and D. Freedman, “Topology noise removal for curve  and surface evolution,” in Conference proceedings MCV 2010, Beijing, China, 2010, vol. 6533, pp. 31–42.
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2010 | Journal Article | IST-REx-ID: 3783
F. Palero, F. González Candelas, and M. Pascual, “Microsatelight – Pipeline to expedite microsatellite analysis,” Journal of Heredity, vol. 102, no. 2, pp. 247–249, 2010.
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2010 | Journal Article | IST-REx-ID: 3785
F. Palero, P. Abello, E. Macpherson, C. Matthee, and M. Pascual, “Genetic diversity levels in fishery-exploited spiny lobsters of the Genus Palinurus (Decapoda: Achelata),” Journal of Crustacean Biology, vol. 30, no. 4, pp. 658–663, 2010.
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2010 | Journal Article | IST-REx-ID: 3787 | OA
F. Palero, S. Hall, P. Clark, D. Johnston, J. Mackenzie Dodds, and S. Thatje, “DNA extraction from formalin-fixed tissue: new light from the deep sea,” Scientia Marina, vol. 74, no. 3, pp. 465–470, 2010.
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2010 | Journal Article | IST-REx-ID: 3788
A. Klopper, G. Krens, S. Grill, and C.-P. J. Heisenberg, “Finite-size corrections to scaling behavior in sorted cell aggregates,” The European Physical Journal E: Soft Matter and Biological Physics, vol. 33, no. 2, pp. 99–103, 2010.
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2010 | Journal Article | IST-REx-ID: 3789
E. Quesada-Hernández et al., “Stereotypical cell division orientation controls neural rod midline formation in zebrafish,” Current Biology, vol. 20, no. 21, pp. 1966–1972, 2010.
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2010 | Journal Article | IST-REx-ID: 3790 | OA
A. Diz Muñoz et al., “Control of directed cell migration in vivo by membrane-to-cortex attachment,” PLoS Biology, vol. 8, no. 11, 2010.
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2010 | Journal Article | IST-REx-ID: 3792
L. Carvalho and C.-P. J. Heisenberg, “The yolk syncytial layer in early, zebrafish development,” Trends in Cell Biology, vol. 20, no. 10, pp. 586–592, 2010.
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2010 | Conference Paper | IST-REx-ID: 3793 | OA
S. Nowozin, P. Gehler, and C. Lampert, “On parameter learning in CRF-based approaches to object class image segmentation,” presented at the ECCV: European Conference on Computer Vision, Heraklion, Crete, Greece, 2010, vol. 6316, pp. 98–111.
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2010 | Conference Paper | IST-REx-ID: 3794
C. Lampert and O. Krömer, “Weakly-paired maximum covariance analysis for multimodal dimensionality reduction and transfer learning,” presented at the ECCV: European Conference on Computer Vision, Heraklion, Crete, Greece, 2010, vol. 6312, pp. 566–579.
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2010 | Book Chapter | IST-REx-ID: 3795 | OA
H. Edelsbrunner, D. Morozov, and A. Patel, “The stability of the apparent contour of an orientable 2-manifold,” in Topological Data Analysis and Visualization: Theory, Algorithms and Applications, Springer, 2010, pp. 27–42.
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2010 | Journal Article | IST-REx-ID: 3832 | OA
J. Guzmán and P. M. Jonas, “Beyond TARPs: The growing list of auxiliary AMPAR subunits,” Neuron, vol. 66, no. 1, pp. 8–10, 2010.
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2010 | Journal Article | IST-REx-ID: 3833
P. M. Jonas and S. Hefft, “GABA release at terminals of CCK-interneurons: synchrony, asynchrony and modulation by cannabinoid receptors (commentary on Ali & Todorova),” The European Journal of Neuroscience, vol. 31, no. 7, pp. 1194–1195, 2010.
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2010 | Journal Article | IST-REx-ID: 3834 | OA
V. Wolf, R. Goel, M. Mateescu, and T. A. Henzinger, “Solving the chemical master equation using sliding windows,” BMC Systems Biology, vol. 4, no. 42, pp. 1–19, 2010.
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2010 | Conference Paper | IST-REx-ID: 3838 | OA
T. A. Henzinger, M. Mateescu, L. Mikeev, and V. Wolf, “Hybrid numerical solution of the chemical master equation,” presented at the CMSB: Computational Methods in Systems Biology, Trento, Italy, 2010, pp. 55–65.
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2010 | Conference Paper | IST-REx-ID: 3839 | OA
T. A. Henzinger, T. Hottelier, L. Kovács, and A. Voronkov, “Invariant and type inference for matrices,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Madrid, Spain, 2010, vol. 5944, pp. 163–179.
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2010 | Conference Paper | IST-REx-ID: 3840
T. A. Henzinger, “From boolean to quantitative notions of correctness,” presented at the POPL: Principles of Programming Languages, Madrid, Spain, 2010, vol. 45, no. 1, pp. 157–158.
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2010 | Journal Article | IST-REx-ID: 3498
M. Sabeti Aschraf, C. Gonano, E. Nemecek, L. Cichocki, and C. Schueller Weidekamm, “Intra-operative ultrasound facilitates the localization of the calcific deposit during arthroscopic treatment of calcifying tendinitis,” Knee Surgery, Sports Traumatology, Arthroscopy, vol. 18, no. 12, pp. 1792–1794, 2010.
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2010 | Journal Article | IST-REx-ID: 3604
H. Senn, S. Goodman, G. Swanson, N. H. Barton, and J. Pemberton, “Investigating temporal changes in hybridisation and introgression between invasive sika (Cervus nippon) and native red deer (Cervus elaphus) on the Kintyre Peninsula, Scotland,” Molecular Ecology, vol. 19, no. 5, pp. 910–924, 2010.
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2010 | Journal Article | IST-REx-ID: 3718
J. Guzmán et al., “P2Y1 receptors inhibit long-term depression in the prefrontal cortex.,” Neuropharmacology, vol. 59, no. 6, pp. 406–415, 2010.
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