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3929 Publications
2016 | Journal Article | IST-REx-ID: 1266 |

Neural oscillations as a signature of efficient coding in the presence of synaptic delays
M.J. Chalk, B. Gutkin, S. Denève, ELife 5 (2016).
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M.J. Chalk, B. Gutkin, S. Denève, ELife 5 (2016).
2016 | Journal Article | IST-REx-ID: 1267 |

Nonexistence of large nuclei in the liquid drop model
R. Frank, R. Killip, P. Nam, Letters in Mathematical Physics 106 (2016) 1033–1036.
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R. Frank, R. Killip, P. Nam, Letters in Mathematical Physics 106 (2016) 1033–1036.
2016 | Journal Article | IST-REx-ID: 1268
Immune memory in invertebrates
B. Milutinovic, J. Kurtz, Seminars in Immunology 28 (2016) 328–342.
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| DOI
B. Milutinovic, J. Kurtz, Seminars in Immunology 28 (2016) 328–342.
2016 | Journal Article | IST-REx-ID: 1269 |

Plant hormones in interactions with the environment
E. Benková, Plant Molecular Biology 91 (2016) 597.
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E. Benková, Plant Molecular Biology 91 (2016) 597.
2016 | Journal Article | IST-REx-ID: 1270 |

Beyond the French flag model: Exploiting spatial and gene regulatory interactions for positional information
P. Hillenbrand, U. Gerland, G. Tkačik, PLoS One 11 (2016).
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P. Hillenbrand, U. Gerland, G. Tkačik, PLoS One 11 (2016).
2016 | Journal Article | IST-REx-ID: 1271 |

Steering cell migration by alternating blebs and actin-rich protrusions
A. Diz Muñoz, P. Romanczuk, W. Yu, M. Bergert, K. Ivanovitch, G. Salbreux, C.-P.J. Heisenberg, E. Paluch, BMC Biology 14 (2016).
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A. Diz Muñoz, P. Romanczuk, W. Yu, M. Bergert, K. Ivanovitch, G. Salbreux, C.-P.J. Heisenberg, E. Paluch, BMC Biology 14 (2016).
2016 | Journal Article | IST-REx-ID: 1272 |

Generalized offsetting of planar structures using skeletons
M. Held, S. Huber, P. Palfrader, Computer-Aided Design and Applications 13 (2016) 712–721.
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M. Held, S. Huber, P. Palfrader, Computer-Aided Design and Applications 13 (2016) 712–721.
2016 | Journal Article | IST-REx-ID: 1273 |

Lateral root emergence in Arabidopsis is dependent on transcription factor LBD29 regulation of auxin influx carrier LAX3
S. Porco, A. Larrieu, Y. Du, A. Gaudinier, T. Goh, K. Swarup, R. Swarup, B. Kuempers, A. Bishopp, J. Lavenus, I. Casimiro, K. Hill, E. Benková, H. Fukaki, S. Brady, B. Scheres, B. Peéet, M. Bennett, Development 143 (2016) 3340–3349.
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S. Porco, A. Larrieu, Y. Du, A. Gaudinier, T. Goh, K. Swarup, R. Swarup, B. Kuempers, A. Bishopp, J. Lavenus, I. Casimiro, K. Hill, E. Benková, H. Fukaki, S. Brady, B. Scheres, B. Peéet, M. Bennett, Development 143 (2016) 3340–3349.
2016 | Journal Article | IST-REx-ID: 1274 |

Vascular cambium regeneration and vessel formation in wounded inflorescence stems of Arabidopsis
E. Mazur, E. Benková, J. Friml, Scientific Reports 6 (2016).
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E. Mazur, E. Benková, J. Friml, Scientific Reports 6 (2016).
2016 | Journal Article | IST-REx-ID: 1275
Callan-Jones et al. Reply
A. Callan Jones, V. Ruprecht, S. Wieser, C.-P.J. Heisenberg, R. Voituriez, Physical Review Letters 117 (2016).
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| DOI
A. Callan Jones, V. Ruprecht, S. Wieser, C.-P.J. Heisenberg, R. Voituriez, Physical Review Letters 117 (2016).
2016 | Journal Article | IST-REx-ID: 1276 |

Atomistic determinants of co-enzyme Q reduction at the Qi-site of the cytochrome bc1 complex
P. Postila, K. Kaszuba, P. Kuleta, I. Vattulainen, M. Sarewicz, A. Osyczka, T. Róg, Scientific Reports 6 (2016).
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P. Postila, K. Kaszuba, P. Kuleta, I. Vattulainen, M. Sarewicz, A. Osyczka, T. Róg, Scientific Reports 6 (2016).
2016 | Journal Article | IST-REx-ID: 1277 |

Danger-associated peptide signaling in Arabidopsis requires clathrin
F. Ortiz Morea, D. Savatin, W. Dejonghe, R. Kumar, Y. Luo, M. Adamowski, J. Van Begin, K. Dressano, G. De Oliveira, X. Zhao, Q. Lu, A. Madder, J. Friml, D. De Moura, E. Russinova, PNAS 113 (2016) 11028–11033.
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F. Ortiz Morea, D. Savatin, W. Dejonghe, R. Kumar, Y. Luo, M. Adamowski, J. Van Begin, K. Dressano, G. De Oliveira, X. Zhao, Q. Lu, A. Madder, J. Friml, D. De Moura, E. Russinova, PNAS 113 (2016) 11028–11033.
2016 | Journal Article | IST-REx-ID: 1278 |

Distribution and structure of synapses on medial vestibular nuclear neurons targeted by cerebellar flocculus purkinje cells and vestibular nerve in mice: Light and electron microscopy studies
H. Matsuno, M. Kudoh, A. Watakabe, T. Yamamori, R. Shigemoto, S. Nagao, PLoS One 11 (2016).
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H. Matsuno, M. Kudoh, A. Watakabe, T. Yamamori, R. Shigemoto, S. Nagao, PLoS One 11 (2016).
2016 | Journal Article | IST-REx-ID: 1279 |

Optogenetically blocking sharp wave ripple events in sleep does not interfere with the formation of stable spatial representation in the CA1 area of the hippocampus
K. Kovács, J. O’Neill, P. Schönenberger, M. Penttonen, D.K. Rangel Guerrero, J.L. Csicsvari, PLoS One 11 (2016).
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K. Kovács, J. O’Neill, P. Schönenberger, M. Penttonen, D.K. Rangel Guerrero, J.L. Csicsvari, PLoS One 11 (2016).
2016 | Journal Article | IST-REx-ID: 1280 |

Fixed energy universality for generalized wigner matrices
P. Bourgade, L. Erdös, H. Yau, J. Yin, Communications on Pure and Applied Mathematics 69 (2016) 1815–1881.
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P. Bourgade, L. Erdös, H. Yau, J. Yin, Communications on Pure and Applied Mathematics 69 (2016) 1815–1881.
2016 | Journal Article | IST-REx-ID: 1281 |

Nitrate controls root development through posttranscriptional regulation of the NRT1.1/NPF6.3 transporter sensor
E. Bouguyon, F. Perrine Walker, M. Pervent, J. Rochette, C. Cuesta, E. Benková, A. Martinière, L. Bach, G. Krouk, A. Gojon, P. Nacry, Plant Physiology 172 (2016) 1237–1248.
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E. Bouguyon, F. Perrine Walker, M. Pervent, J. Rochette, C. Cuesta, E. Benková, A. Martinière, L. Bach, G. Krouk, A. Gojon, P. Nacry, Plant Physiology 172 (2016) 1237–1248.
2016 | Journal Article | IST-REx-ID: 1282 |

On eigenvalues of random complexes
A. Gundert, U. Wagner, Israel Journal of Mathematics 216 (2016) 545–582.
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A. Gundert, U. Wagner, Israel Journal of Mathematics 216 (2016) 545–582.
2016 | Journal Article | IST-REx-ID: 1283
Seedlings’ strategy to overcome a soil barrier
Q. Zhu, E. Benková, Trends in Plant Science 21 (2016) 809–811.
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Q. Zhu, E. Benková, Trends in Plant Science 21 (2016) 809–811.
2016 | Journal Article | IST-REx-ID: 1285
Focal adhesion-independent cell migration
E. Paluch, I. Aspalter, M.K. Sixt, Annual Review of Cell and Developmental Biology 32 (2016) 469–490.
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E. Paluch, I. Aspalter, M.K. Sixt, Annual Review of Cell and Developmental Biology 32 (2016) 469–490.
2016 | Journal Article | IST-REx-ID: 1286 |

Rotation of cold molecular ions inside a Bose-Einstein condensate
B. Midya, M. Tomza, R. Schmidt, M. Lemeshko, Physical Review A - Atomic, Molecular, and Optical Physics 94 (2016).
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B. Midya, M. Tomza, R. Schmidt, M. Lemeshko, Physical Review A - Atomic, Molecular, and Optical Physics 94 (2016).
2016 | Journal Article | IST-REx-ID: 1287 |

Modes and exceptional points in waveguides with impedance boundary conditions
B. Midya, V. Konotop, Optics Letters 41 (2016) 4621–4624.
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B. Midya, V. Konotop, Optics Letters 41 (2016) 4621–4624.
2016 | Journal Article | IST-REx-ID: 1288
Reversible FMN dissociation from Escherichia coli respiratory complex I
P. Holt, R. Efremov, E. Nakamaru Ogiso, L.A. Sazanov, Biochimica et Biophysica Acta - Bioenergetics 1857 (2016) 1777–1785.
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P. Holt, R. Efremov, E. Nakamaru Ogiso, L.A. Sazanov, Biochimica et Biophysica Acta - Bioenergetics 1857 (2016) 1777–1785.
2016 | Journal Article | IST-REx-ID: 1289 |

The classification of endoscopy images with persistent homology
O. Dunaeva, H. Edelsbrunner, A. Lukyanov, M. Machin, D. Malkova, R. Kuvaev, S. Kashin, Pattern Recognition Letters 83 (2016) 13–22.
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O. Dunaeva, H. Edelsbrunner, A. Lukyanov, M. Machin, D. Malkova, R. Kuvaev, S. Kashin, Pattern Recognition Letters 83 (2016) 13–22.
2016 | Journal Article | IST-REx-ID: 1290 |

Compounds that select against the tetracycline-resistance efflux pump
L. Stone, M. Baym, T. Lieberman, R.P. Chait, J. Clardy, R. Kishony, Nature Chemical Biology 12 (2016) 902–904.
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L. Stone, M. Baym, T. Lieberman, R.P. Chait, J. Clardy, R. Kishony, Nature Chemical Biology 12 (2016) 902–904.
2016 | Journal Article | IST-REx-ID: 1291 |

Periodic striped ground states in Ising models with competing interactions
A. Giuliani, R. Seiringer, Communications in Mathematical Physics 347 (2016) 983–1007.
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A. Giuliani, R. Seiringer, Communications in Mathematical Physics 347 (2016) 983–1007.
2016 | Journal Article | IST-REx-ID: 1292 |

Computing the Thurston–Bennequin invariant in open books
S. Durst, M. Kegel, M.D. Klukas, Acta Mathematica Hungarica 150 (2016) 441–455.
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S. Durst, M. Kegel, M.D. Klukas, Acta Mathematica Hungarica 150 (2016) 441–455.
2016 | Journal Article | IST-REx-ID: 1293 |

Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors
L.T. Solus, C. Uhler, R. Yoshida, Linear Algebra and Its Applications 509 (2016) 247–275.
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L.T. Solus, C. Uhler, R. Yoshida, Linear Algebra and Its Applications 509 (2016) 247–275.
2016 | Journal Article | IST-REx-ID: 1295
Multiple covers with balls II: Weighted averages
H. Edelsbrunner, M. Iglesias Ham, Electronic Notes in Discrete Mathematics 54 (2016) 169–174.
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H. Edelsbrunner, M. Iglesias Ham, Electronic Notes in Discrete Mathematics 54 (2016) 169–174.
2016 | Conference Paper | IST-REx-ID: 1319
DefSense: computational design of customized deformable input devices
M. Bächer, B. Hepp, F. Pece, P. Kry, B. Bickel, B. Thomaszewski, O. Hilliges, in:, ACM, 2016, pp. 3806–3816.
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| DOI
M. Bächer, B. Hepp, F. Pece, P. Kry, B. Bickel, B. Thomaszewski, O. Hilliges, in:, ACM, 2016, pp. 3806–3816.
2016 | Conference Paper | IST-REx-ID: 1320
Scale-invariant systems realize nonlinear differential operators
M. Lang, E. Sontag, in:, IEEE, 2016.
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M. Lang, E. Sontag, in:, IEEE, 2016.
2016 | Journal Article | IST-REx-ID: 1322 |

Asymmetric power boosts extortion in an economic experiment
C. Hilbe, K. Hagel, M. Milinski, PLoS One 11 (2016).
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C. Hilbe, K. Hagel, M. Milinski, PLoS One 11 (2016).
2016 | Journal Article | IST-REx-ID: 1323 |

Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses
N. Vyleta, C. Borges Merjane, P.M. Jonas, ELife 5 (2016).
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N. Vyleta, C. Borges Merjane, P.M. Jonas, ELife 5 (2016).
2016 | Conference Paper | IST-REx-ID: 1324
Indefinite-horizon reachability in Goal-DEC-POMDPs
K. Chatterjee, M. Chmelik, in:, Proceedings of the Twenty-Sixth International Conference on International Conference on Automated Planning and Scheduling, AAAI Press, 2016, pp. 88–96.
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K. Chatterjee, M. Chmelik, in:, Proceedings of the Twenty-Sixth International Conference on International Conference on Automated Planning and Scheduling, AAAI Press, 2016, pp. 88–96.
2016 | Conference Paper | IST-REx-ID: 1325 |

Stability in graphs and games
T. Brázdil, V. Forejt, A. Kučera, P. Novotný, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
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T. Brázdil, V. Forejt, A. Kučera, P. Novotný, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
2016 | Conference Paper | IST-REx-ID: 1326 |

Optimizing the expected mean payoff in Energy Markov Decision Processes
T. Brázdil, A. Kučera, P. Novotný, in:, Springer, 2016, pp. 32–49.
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T. Brázdil, A. Kučera, P. Novotný, in:, Springer, 2016, pp. 32–49.
2016 | Conference Paper | IST-REx-ID: 1327 |

Stochastic shortest path with energy constraints in POMDPs
T. Brázdil, K. Chatterjee, M. Chmelik, A. Gupta, P. Novotný, in:, Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems, ACM, 2016, pp. 1465–1466.
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T. Brázdil, K. Chatterjee, M. Chmelik, A. Gupta, P. Novotný, in:, Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems, ACM, 2016, pp. 1465–1466.
2016 | Journal Article | IST-REx-ID: 1328 |

Heavy-hole states in germanium hut wires
H. Watzinger, C. Kloeffel, L. Vukušić, M. Rossell, V. Sessi, J. Kukucka, R. Kirchschlager, E. Lausecker, A. Truhlar, M. Glaser, A. Rastelli, A. Fuhrer, D. Loss, G. Katsaros, Nano Letters 16 (2016) 6879–6885.
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H. Watzinger, C. Kloeffel, L. Vukušić, M. Rossell, V. Sessi, J. Kukucka, R. Kirchschlager, E. Lausecker, A. Truhlar, M. Glaser, A. Rastelli, A. Fuhrer, D. Loss, G. Katsaros, Nano Letters 16 (2016) 6879–6885.
2016 | Journal Article | IST-REx-ID: 1329 |

De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata
A.K. Huylmans, A. López Ezquerra, J. Parsch, M. Cordellier, Genome Biology and Evolution 8 (2016) 3120–3139.
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A.K. Huylmans, A. López Ezquerra, J. Parsch, M. Cordellier, Genome Biology and Evolution 8 (2016) 3120–3139.
2016 | Journal Article | IST-REx-ID: 1330 |

Billiards in convex bodies with acute angles
A. Akopyan, A. Balitskiy, Israel Journal of Mathematics 216 (2016) 833–845.
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A. Akopyan, A. Balitskiy, Israel Journal of Mathematics 216 (2016) 833–845.
2016 | Journal Article | IST-REx-ID: 1332 |

Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments
R.P. Chait, A. Palmer, I. Yelin, R. Kishony, Nature Communications 7 (2016).
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R.P. Chait, A. Palmer, I. Yelin, R. Kishony, Nature Communications 7 (2016).
2016 | Journal Article | IST-REx-ID: 1333 |

Humans choose representatives who enforce cooperation in social dilemmas through extortion
M. Milinski, C. Hilbe, D. Semmann, R. Sommerfeld, J. Marotzke, Nature Communications 7 (2016).
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M. Milinski, C. Hilbe, D. Semmann, R. Sommerfeld, J. Marotzke, Nature Communications 7 (2016).
2016 | Journal Article | IST-REx-ID: 1334 |

Activity dependent plasticity of hippocampal place maps
P. Schönenberger, J. O’Neill, J.L. Csicsvari, Nature Communications 7 (2016).
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P. Schönenberger, J. O’Neill, J.L. Csicsvari, Nature Communications 7 (2016).
2016 | Conference Paper | IST-REx-ID: 1335 |

Quantitative monitor automata
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Springer, 2016, pp. 23–38.
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K. Chatterjee, T.A. Henzinger, J. Otop, in:, Springer, 2016, pp. 23–38.
2016 | Journal Article | IST-REx-ID: 1339 |

Tunable mechanical coupling between driven microelectromechanical resonators
G. Verbiest, D. Xu, M. Goldsche, T. Khodkov, S. Barzanjeh, N. Von Den Driesch, D. Buca, C. Stampfer, Applied Physics Letter 109 (2016).
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G. Verbiest, D. Xu, M. Goldsche, T. Khodkov, S. Barzanjeh, N. Von Den Driesch, D. Buca, C. Stampfer, Applied Physics Letter 109 (2016).
2016 | Conference Paper | IST-REx-ID: 1340 |

The big match in small space
K. Hansen, R. Ibsen-Jensen, M. Koucký, in:, Springer, 2016, pp. 64–76.
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K. Hansen, R. Ibsen-Jensen, M. Koucký, in:, Springer, 2016, pp. 64–76.
2016 | Conference Paper | IST-REx-ID: 1341 |

Dynamic resource allocation games
G. Avni, T.A. Henzinger, O. Kupferman, in:, Springer, 2016, pp. 153–166.
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G. Avni, T.A. Henzinger, O. Kupferman, in:, Springer, 2016, pp. 153–166.
2016 | Journal Article | IST-REx-ID: 1342 |

Spatiotemporal microbial evolution on antibiotic landscapes
M. Baym, T. Lieberman, E. Kelsic, R.P. Chait, R. Gross, I. Yelin, R. Kishony, Science 353 (2016) 1147–1151.
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M. Baym, T. Lieberman, E. Kelsic, R.P. Chait, R. Gross, I. Yelin, R. Kishony, Science 353 (2016) 1147–1151.
2016 | Journal Article | IST-REx-ID: 1343 |

Dissipative preparation of antiferromagnetic order in the Fermi-Hubbard model
J. Kaczmarczyk, H. Weimer, M. Lemeshko, New Journal of Physics 18 (2016).
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J. Kaczmarczyk, H. Weimer, M. Lemeshko, New Journal of Physics 18 (2016).
2016 | Journal Article | IST-REx-ID: 1344 |

TIR1 AFB Aux IAA auxin perception mediates rapid cell wall acidification and growth of Arabidopsis hypocotyls
M. Fendrych, J. Leung, J. Friml, ELife 5 (2016).
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M. Fendrych, J. Leung, J. Friml, ELife 5 (2016).
2016 | Journal Article | IST-REx-ID: 1345 |

Plasma membrane: Negative attraction
G. Molnar, M. Fendrych, J. Friml, Nature Plants 2 (2016).
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G. Molnar, M. Fendrych, J. Friml, Nature Plants 2 (2016).