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4895 Publications


2019 | Thesis | IST-REx-ID: 6947 | OA
Assen FP. Lymph node mechanics: Deciphering the interplay between stroma contractility, morphology and lymphocyte trafficking. 2019. doi:10.15479/AT:ISTA:6947
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2019 | Thesis | IST-REx-ID: 6849 | OA
Rangel Guerrero DK. The role of CCK-interneurons in regulating hippocampal network dynamics. 2019. doi:10.15479/AT:ISTA:6849
[Published Version] View | Files available | DOI
 

2019 | Journal Article | IST-REx-ID: 6351 | OA
Marhavá P, Hörmayer L, Yoshida S, Marhavý P, Benková E, Friml J. Re-activation of stem cell pathways for pattern restoration in plant wound healing. Cell. 2019;177(4):957-969.e13. doi:10.1016/j.cell.2019.04.015
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2019 | Journal Article | IST-REx-ID: 6943 | OA
Hörmayer L, Friml J. Targeted cell ablation-based insights into wound healing and restorative patterning. Current Opinion in Plant Biology. 2019;52:124-130. doi:10.1016/j.pbi.2019.08.006
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2019 | Journal Article | IST-REx-ID: 7391 | OA
Tabata S, Jevtic M, Kurashige N, et al. Electron microscopic detection of single membrane proteins by a specific chemical labeling. iScience. 2019;22(12):256-268. doi:10.1016/j.isci.2019.11.025
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2019 | Journal Article | IST-REx-ID: 6848 | OA
Kampjut D, Sazanov LA. Structure and mechanism of mitochondrial proton-translocating transhydrogenase. Nature. 2019;573(7773):291–295. doi:10.1038/s41586-019-1519-2
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2019 | Journal Article | IST-REx-ID: 6194 | OA
Boccara CN, Nardin M, Stella F, O’Neill J, Csicsvari JL. The entorhinal cognitive map is attracted to goals. Science. 2019;363(6434):1443-1447. doi:10.1126/science.aav4837
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2019 | Thesis | IST-REx-ID: 7132 | OA
Mckenzie C. Design and characterization of methods and biological components to realize synthetic neurotransmission. 2019. doi:10.15479/at:ista:7132
[Published Version] View | Files available | DOI
 

2019 | Journal Article | IST-REx-ID: 5949 | OA
Käfer K, Malagon-Vina H, Dickerson D, et al. Disrupted-in-schizophrenia 1 overexpression disrupts hippocampal coding and oscillatory synchronization. Hippocampus. 2019;29(9):802-816. doi:10.1002/hipo.23076
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2019 | Thesis | IST-REx-ID: 6825 | OA
Käfer K. The hippocampus and medial prefrontal cortex during flexible behavior. 2019. doi:10.15479/AT:ISTA:6825
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2019 | Journal Article | IST-REx-ID: 6713 | OA
Castro JP, Yancoskie MN, Marchini M, et al. An integrative genomic analysis of the Longshanks selection experiment for longer limbs in mice. eLife. 2019;8. doi:10.7554/eLife.42014
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2019 | Preprint | IST-REx-ID: 10065 | OA
Hofmann AC, Jirovec D, Borovkov M, et al. Assessing the potential of Ge/SiGe quantum dots as hosts for singlet-triplet qubits. arXiv. doi:10.48550/arXiv.1910.05841
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 6187 | OA
Valosková K, Bicher J, Roblek M, et al. A conserved major facilitator superfamily member orchestrates a subset of O-glycosylation to aid macrophage tissue invasion. eLife. 2019;8. doi:10.7554/elife.41801
[Published Version] View | Files available | DOI | WoS
 

2019 | Thesis | IST-REx-ID: 6546 | OA
Valosková K. The role of a highly conserved major facilitator superfamily member in Drosophila embryonic macrophage migration. 2019. doi:10.15479/AT:ISTA:6546
[Published Version] View | Files available | DOI
 

2019 | Thesis | IST-REx-ID: 6363 | OA
Espinoza Martinez C. Parvalbumin+ interneurons enable efficient pattern separation in hippocampal microcircuits. 2019. doi:10.15479/AT:ISTA:6363
[Published Version] View | Files available | DOI
 

2019 | Conference Paper | IST-REx-ID: 6780 | OA
Huang M, Fu H, Chatterjee K, Goharshady AK. Modular verification for almost-sure termination of probabilistic programs. In: Proceedings of the 34th ACM International Conference on Object-Oriented Programming, Systems, Languages, and Applications . Vol 3. ACM; 2019. doi:10.1145/3360555
[Published Version] View | Files available | DOI | arXiv
 

2019 | Journal Article | IST-REx-ID: 6380 | OA
Chatterjee K, Goharshady AK, Okati N, Pavlogiannis A. Efficient parameterized algorithms for data packing. Proceedings of the ACM on Programming Languages. 2019;3(POPL). doi:10.1145/3290366
[Published Version] View | Files available | DOI
 

2019 | Conference Paper | IST-REx-ID: 6056 | OA
Chatterjee K, Goharshady AK, Pourdamghani A. Probabilistic smart contracts: Secure randomness on the blockchain. In: IEEE International Conference on Blockchain and Cryptocurrency. IEEE; 2019. doi:10.1109/BLOC.2019.8751326
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2019 | Conference Paper | IST-REx-ID: 6378 | OA
Chatterjee K, Goharshady AK, Pourdamghani A. Hybrid Mining: Exploiting blockchain’s computational power for distributed problem solving. In: Proceedings of the 34th ACM Symposium on Applied Computing. Vol Part F147772. ACM; 2019:374-381. doi:10.1145/3297280.3297319
[Submitted Version] View | Files available | DOI | WoS
 

2019 | Conference Paper | IST-REx-ID: 6175 | OA
Wang P, Fu H, Goharshady AK, Chatterjee K, Qin X, Shi W. Cost analysis of nondeterministic probabilistic programs. In: PLDI 2019: Proceedings of the 40th ACM SIGPLAN Conference on Programming Language Design and Implementation. Association for Computing Machinery; 2019:204-220. doi:10.1145/3314221.3314581
[Submitted Version] View | Files available | DOI | WoS | arXiv
 

2019 | Conference Paper | IST-REx-ID: 6490 | OA
Chatterjee K, Goharshady AK, Goharshady EK. The treewidth of smart contracts. In: Proceedings of the 34th ACM Symposium on Applied Computing. Vol Part F147772. ACM; :400-408. doi:10.1145/3297280.3297322
[Submitted Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 7158 | OA
Chatterjee K, Goharshady AK, Goyal P, Ibsen-Jensen R, Pavlogiannis A. Faster algorithms for dynamic algebraic queries in basic RSMs with constant treewidth. ACM Transactions on Programming Languages and Systems. 2019;41(4). doi:10.1145/3363525
[Submitted Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 7014 | OA
Chatterjee K, Fu H, Goharshady AK. Non-polynomial worst-case analysis of recursive programs. ACM Transactions on Programming Languages and Systems. 2019;41(4). doi:10.1145/3339984
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Journal Article | IST-REx-ID: 6486 | OA
Kühnen J, Scarselli D, Hof B. Relaminarization of pipe flow by means of 3D-printed shaped honeycombs. Journal of Fluids Engineering. 2019;141(11). doi:10.1115/1.4043494
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Journal Article | IST-REx-ID: 6228 | OA
Scarselli D, Kühnen J, Hof B. Relaminarising pipe flow by wall movement. Journal of Fluid Mechanics. 2019;867:934-948. doi:10.1017/jfm.2019.191
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Journal Article | IST-REx-ID: 6260 | OA
Oochi A, Hajny J, Fukui K, et al. Pinstatic acid promotes auxin transport by inhibiting PIN internalization. Plant Physiology. 2019;180(2):1152-1165. doi:10.1104/pp.19.00201
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6508 | OA
Shamipour S, Kardos R, Xue S, Hof B, Hannezo EB, Heisenberg C-PJ. Bulk actin dynamics drive phase segregation in zebrafish oocytes. Cell. 2019;177(6):1463-1479.e18. doi:10.1016/j.cell.2019.04.030
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 7001 | OA
Schwayer C, Shamipour S, Pranjic-Ferscha K, et al. Mechanosensation of tight junctions depends on ZO-1 phase separation and flow. Cell. 2019;179(4):937-952.e18. doi:10.1016/j.cell.2019.10.006
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2019 | Thesis | IST-REx-ID: 6891 | OA
Kopf A. The implication of cytoskeletal dynamics on leukocyte migration. 2019. doi:10.15479/AT:ISTA:6891
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2019 | Journal Article | IST-REx-ID: 6328 | OA
Renkawitz J, Kopf A, Stopp JA, et al. Nuclear positioning facilitates amoeboid migration along the path of least resistance. Nature. 2019;568:546-550. doi:10.1038/s41586-019-1087-5
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6877
Kopf A, Sixt MK. The neural crest pitches in to remove apoptotic debris. Cell. 2019;179(1):51-53. doi:10.1016/j.cell.2019.08.047
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2019 | Journal Article | IST-REx-ID: 6830 | OA
Contreras X, Hippenmeyer S. Memo1 tiles the radial glial cell grid. Neuron. 2019;103(5):750-752. doi:10.1016/j.neuron.2019.08.021
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2019 | Journal Article | IST-REx-ID: 6627 | OA
Adamowski M, Li L, Friml J. Reorientation of cortical microtubule arrays in the hypocotyl of arabidopsis thaliana is induced by the cell growth process and independent of auxin signaling. International Journal of Molecular Sciences. 2019;20(13). doi:10.3390/ijms20133337
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2019 | Journal Article | IST-REx-ID: 7117 | OA
Hafner C, Schumacher C, Knoop E, Auzinger T, Bickel B, Bächer M. X-CAD: Optimizing CAD Models with Extended Finite Elements. ACM Transactions on Graphics. 2019;38(6). doi:10.1145/3355089.3356576
[Submitted Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 6189 | OA
Agrawal N, Choueiri GH, Hof B. Transition to turbulence in particle laden flows. Physical Review Letters. 2019;122(11). doi:10.1103/PhysRevLett.122.114502
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Thesis | IST-REx-ID: 6371 | OA
Igler C. On the nature of gene regulatory design - The biophysics of transcription factor binding shapes gene regulation. 2019. doi:10.15479/AT:ISTA:6371
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2018 | Journal Article | IST-REx-ID: 10286 | OA
Allini EN, Skórski M, Petura O, Bernard F, Laban M, Fischer V. Evaluation and monitoring of free running oscillators serving as source of randomness. IACR Transactions on Cryptographic Hardware and Embedded Systems. 2018;2018(3):214-242. doi:10.13154/tches.v2018.i3.214-242
[Published Version] View | Files available | DOI
 

2018 | Conference Paper | IST-REx-ID: 10883 | OA
Chatterjee K, Dvořák W, Henzinger MH, Svozil A. Quasipolynomial set-based symbolic algorithms for parity games. In: 22nd International Conference on Logic for Programming, Artificial Intelligence and Reasoning. Vol 57. EasyChair; 2018:233-253. doi:10.29007/5z5k
[Published Version] View | Files available | DOI | arXiv
 

2018 | Conference Paper | IST-REx-ID: 11 | OA
Leopold NK, Pickl P. Mean-field limits of particles in interaction with quantised radiation fields. In: Vol 270. Springer; 2018:185-214. doi:10.1007/978-3-030-01602-9_9
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 1215 | OA
Flandoli F, Russo F, Zanco GA. Infinite-dimensional calculus under weak spatial regularity of the processes. Journal of Theoretical Probability. 2018;31(2):789-826. doi:10.1007/s10959-016-0724-2
[Published Version] View | Files available | DOI
 

2018 | Conference Paper | IST-REx-ID: 185 | OA
Fulek R, Kynčl J. Hanani-Tutte for approximating maps of graphs. In: Vol 99. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2018. doi:10.4230/LIPIcs.SoCG.2018.39
[Published Version] View | Files available | DOI
 

2018 | Conference Paper | IST-REx-ID: 188 | OA
Edelsbrunner H, Virk Z, Wagner H. Smallest enclosing spheres and Chernoff points in Bregman geometry. In: Vol 99. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2018:35:1-35:13. doi:10.4230/LIPIcs.SoCG.2018.35
[Published Version] View | Files available | DOI
 

2018 | Journal Article | IST-REx-ID: 306 | OA
De Martino A, De Martino D. An introduction to the maximum entropy approach and its application to inference problems in biology. Heliyon. 2018;4(4). doi:10.1016/j.heliyon.2018.e00596
[Published Version] View | Files available | DOI
 

2018 | Book | IST-REx-ID: 3300
Clarke EM, Henzinger TA, Veith H, Bloem R. Handbook of Model Checking. 1st ed. Cham: Springer Nature; 2018. doi:10.1007/978-3-319-10575-8
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2018 | Book Chapter | IST-REx-ID: 37 | OA
Zagórski MP, Kicheva A. Measuring dorsoventral pattern and morphogen signaling profiles in the growing neural tube. In: Morphogen Gradients . Vol 1863. MIMB. Springer Nature; 2018:47-63. doi:10.1007/978-1-4939-8772-6_4
[Submitted Version] View | Files available | DOI
 

2018 | Journal Article | IST-REx-ID: 305
Misun P, Birchler A, Lang M, Hierlemann A, Frey O. Fabrication and operation of microfluidic hanging drop networks. Methods in Molecular Biology. 2018;1771:183-202. doi:10.1007/978-1-4939-7792-5_15
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2018 | Conference Paper | IST-REx-ID: 325 | OA
Agrawal S, Chatterjee K, Novotný P. Lexicographic ranking supermartingales: an efficient approach to termination of probabilistic programs. In: Vol 2. ACM; 2018. doi:10.1145/3158122
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2018 | Book Chapter | IST-REx-ID: 408
Trinh H, Verstraeten I, Geelen D. In vitro assay for induction of adventitious rooting on intact arabidopsis hypocotyls. In: Root Development . Vol 1761. Springer Nature; 2018:95-102. doi:10.1007/978-1-4939-7747-5_7
View | DOI | PubMed | Europe PMC
 

2018 | Book Chapter | IST-REx-ID: 411
Karampelias M, Tejos R, Friml J, Vanneste S. Optimized whole mount in situ immunolocalization for Arabidopsis thaliana  root meristems and lateral root primordia. In: Ristova D, Barbez E, eds. Root Development. Methods and Protocols. Vol 1761. MIMB. Springer; 2018:131-143. doi:10.1007/978-1-4939-7747-5_10
View | DOI
 

2018 | Journal Article | IST-REx-ID: 456
Novarino G. Zika-associated microcephaly: Reduce the stress and race for the treatment. Science Translational Medicine. 2018;10(423). doi:10.1126/scitranslmed.aar7514
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