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2770 Publications
2012 | Journal Article | IST-REx-ID: 2302
The propagation approach for computing biochemical reaction networks
T.A. Henzinger, M. Mateescu, IEEE ACM Transactions on Computational Biology and Bioinformatics 10 (2012) 310–322.
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| PubMed | Europe PMC
T.A. Henzinger, M. Mateescu, IEEE ACM Transactions on Computational Biology and Bioinformatics 10 (2012) 310–322.
2012 | Conference Paper | IST-REx-ID: 2903 
The adaptive topology of a digital image
H. Edelsbrunner, O. Symonova, in:, IEEE, 2012, pp. 41–48.
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H. Edelsbrunner, O. Symonova, in:, IEEE, 2012, pp. 41–48.
2012 | Conference Paper | IST-REx-ID: 2915
Multi-modal learning for dynamic tactile sensing
O. Kroemer, C. Lampert, J. Peters, in:, Deutsches Zentrum für Luft und Raumfahrt, 2012.
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O. Kroemer, C. Lampert, J. Peters, in:, Deutsches Zentrum für Luft und Raumfahrt, 2012.
2012 | Journal Article | IST-REx-ID: 2958
Hippocampal place cells can encode multiple trial-dependent features through rate remapping
K. Allen, J.N. Rawlins, D. Bannerman, J.L. Csicsvari, Journal of Neuroscience 32 (2012) 14752–14766.
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K. Allen, J.N. Rawlins, D. Bannerman, J.L. Csicsvari, Journal of Neuroscience 32 (2012) 14752–14766.
2012 | Journal Article | IST-REx-ID: 2941
On the optimality of functionals over triangulations of Delaunay sets
N. Dolbilin, H. Edelsbrunner, O. Musin, Russian Mathematical Surveys 67 (2012) 781–783.
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N. Dolbilin, H. Edelsbrunner, O. Musin, Russian Mathematical Surveys 67 (2012) 781–783.
2012 | Journal Article | IST-REx-ID: 2946
MicroRNAs associated with the different human Argonaute proteins
A. Dueck, C. Ziegler, A. Eichner, E. Berezikov, G. Meister, Nucleic Acids Research 40 (2012) 9850–9862.
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A. Dueck, C. Ziegler, A. Eichner, E. Berezikov, G. Meister, Nucleic Acids Research 40 (2012) 9850–9862.
2012 | Journal Article | IST-REx-ID: 2965
Kontext Open Access: Creative Commons
P. Danowski, Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen & Bibliothekare 65 (2012) 200–212.
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P. Danowski, Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen & Bibliothekare 65 (2012) 200–212.
2012 | Journal Article | IST-REx-ID: 2953
Cell-cell adhesion and extracellular matrix diversity counts
C.-P.J. Heisenberg, R. Fässler, Current Opinion in Cell Biology 24 (2012) 559–561.
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C.-P.J. Heisenberg, R. Fässler, Current Opinion in Cell Biology 24 (2012) 559–561.
2012 | Journal Article | IST-REx-ID: 3122
Disassortative mating and the maintenance of sexual polymorphism in painted maple
D. Field, S. Barrett, Molecular Ecology 21 (2012) 3640–3643.
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D. Field, S. Barrett, Molecular Ecology 21 (2012) 3640–3643.
2012 | Conference Paper | IST-REx-ID: 3127
The most persistent soft-clique in a set of sampled graphs
N. Quadrianto, C. Lampert, C. Chen, in:, Proceedings of the 29th International Conference on Machine Learning, Omnipress, 2012, pp. 211–218.
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N. Quadrianto, C. Lampert, C. Chen, in:, Proceedings of the 29th International Conference on Machine Learning, Omnipress, 2012, pp. 211–218.
2012 | Conference Paper | IST-REx-ID: 3134
Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions
H. Edelsbrunner, B. Fasy, G. Rote, in:, Proceedings of the Twenty-Eighth Annual Symposium on Computational Geometry , ACM, 2012, pp. 91–100.
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H. Edelsbrunner, B. Fasy, G. Rote, in:, Proceedings of the Twenty-Eighth Annual Symposium on Computational Geometry , ACM, 2012, pp. 91–100.
2012 | Journal Article | IST-REx-ID: 3242
Social transfer of pathogenic fungus promotes active immunisation in ant colonies
M. Konrad, M. Vyleta, F. Theis, M. Stock, S. Tragust, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, PLoS Biology 10 (2012).
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M. Konrad, M. Vyleta, F. Theis, M. Stock, S. Tragust, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, PLoS Biology 10 (2012).
2012 | Journal Article | IST-REx-ID: 3158
Tissue inducible Lifeact expression allows visualization of actin dynamics in vivo and ex vivo
H. Schachtner, A. Li, D. Stevenson, S. Calaminus, S. Thomas, S. Watson, M.K. Sixt, R. Wedlich Söldner, D. Strathdee, L. Machesky, European Journal of Cell Biology 91 (2012) 923–929.
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H. Schachtner, A. Li, D. Stevenson, S. Calaminus, S. Thomas, S. Watson, M.K. Sixt, R. Wedlich Söldner, D. Strathdee, L. Machesky, European Journal of Cell Biology 91 (2012) 923–929.
2012 | Journal Article | IST-REx-ID: 3160
Transcription factor kinetics and the emerging asymmetry in the early mammalian embryo
P. Pantazis, T. Bollenbach, Cell Cycle 11 (2012) 2055–2058.
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P. Pantazis, T. Bollenbach, Cell Cycle 11 (2012) 2055–2058.
2012 | Conference Paper | IST-REx-ID: 3280
Subspace LWE
K.Z. Pietrzak, in:, Springer, 2012, pp. 548–563.
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K.Z. Pietrzak, in:, Springer, 2012, pp. 548–563.
2012 | Journal Article | IST-REx-ID: 3317
Nanodomain coupling between Ca(2+) channels and sensors of exocytosis at fast mammalian synapses
E. Eggermann, I. Bucurenciu, S. Goswami, P.M. Jonas, Nature Reviews Neuroscience 13 (2012) 7–21.
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E. Eggermann, I. Bucurenciu, S. Goswami, P.M. Jonas, Nature Reviews Neuroscience 13 (2012) 7–21.
2012 | Journal Article | IST-REx-ID: 3247
Remaining genetic diversity in Brazilian Merganser (Mergus octosetaceus)
S. Vilaça, R.A. Fernandes Redondo, L. Lins, F. Santos, Conservation Genetics 13 (2012) 293–298.
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S. Vilaça, R.A. Fernandes Redondo, L. Lins, F. Santos, Conservation Genetics 13 (2012) 293–298.
2012 | Journal Article | IST-REx-ID: 3331
A worst case bound for topology computation of algebraic curves
M. Kerber, M. Sagraloff, Journal of Symbolic Computation 47 (2012) 239–258.
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M. Kerber, M. Sagraloff, Journal of Symbolic Computation 47 (2012) 239–258.
2012 | Journal Article | IST-REx-ID: 3115
Deconstructing approximate offsets
E. Berberich, D. Halperin, M. Kerber, R. Pogalnikova, Discrete & Computational Geometry 48 (2012) 964–989.
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E. Berberich, D. Halperin, M. Kerber, R. Pogalnikova, Discrete & Computational Geometry 48 (2012) 964–989.
2012 | Journal Article | IST-REx-ID: 3836
Separate compilation of hierarchical real-time programs into linear-bounded embedded machine code
A. Ghosal, D. Iercan, C. Kirsch, T.A. Henzinger, A. Sangiovanni Vincentelli, Science of Computer Programming 77 (2012) 96–112.
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A. Ghosal, D. Iercan, C. Kirsch, T.A. Henzinger, A. Sangiovanni Vincentelli, Science of Computer Programming 77 (2012) 96–112.
2012 | Journal Article | IST-REx-ID: 494
Translating to Co-Büchi made tight, unified, and useful
U. Boker, O. Kupferman, ACM Transactions on Computational Logic (TOCL) 13 (2012).
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U. Boker, O. Kupferman, ACM Transactions on Computational Logic (TOCL) 13 (2012).
2012 | Conference Paper | IST-REx-ID: 2888
Quantitative reactive models
T.A. Henzinger, in:, Conference Proceedings MODELS 2012, Springer, 2012, pp. 1–2.
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T.A. Henzinger, in:, Conference Proceedings MODELS 2012, Springer, 2012, pp. 1–2.
2012 | Conference Paper | IST-REx-ID: 2890
Synthesis from incompatible specifications
P. Cerny, S. Gopi, T.A. Henzinger, A. Radhakrishna, N. Totla, in:, Proceedings of the Tenth ACM International Conference on Embedded Software, ACM, 2012, pp. 53–62.
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P. Cerny, S. Gopi, T.A. Henzinger, A. Radhakrishna, N. Totla, in:, Proceedings of the Tenth ACM International Conference on Embedded Software, ACM, 2012, pp. 53–62.
2012 | Journal Article | IST-REx-ID: 2972
Energy parity games
K. Chatterjee, L. Doyen, Theoretical Computer Science 458 (2012) 49–60.
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| arXiv
K. Chatterjee, L. Doyen, Theoretical Computer Science 458 (2012) 49–60.
2012 | Conference Paper | IST-REx-ID: 3165
An O(n2) time algorithm for alternating Büchi games
K. Chatterjee, M. Henzinger, in:, Proceedings of the Annual ACM-SIAM Symposium on Discrete Algorithms, SIAM, 2012, pp. 1386–1399.
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K. Chatterjee, M. Henzinger, in:, Proceedings of the Annual ACM-SIAM Symposium on Discrete Algorithms, SIAM, 2012, pp. 1386–1399.
2012 | Journal Article | IST-REx-ID: 3254
The complexity of stochastic Müller games
K. Chatterjee, Information and Computation 211 (2012) 29–48.
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K. Chatterjee, Information and Computation 211 (2012) 29–48.
2012 | Conference Paper | IST-REx-ID: 2048
Practical leakage-resilient symmetric cryptography
S. Faust, K.Z. Pietrzak, J. Schipper, in:, Conference Proceedings CHES 2012, Springer, 2012, pp. 213–232.
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S. Faust, K.Z. Pietrzak, J. Schipper, in:, Conference Proceedings CHES 2012, Springer, 2012, pp. 213–232.
2012 | Journal Article | IST-REx-ID: 2411
A consistent phylogenetic backbone for the fungi
I. Ebersberger, R. De Matos Simoes, A. Kupczok, M. Gube, E. Kothe, K. Voigt, A. Von Haeseler, Molecular Biology and Evolution 29 (2012) 1319–1334.
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I. Ebersberger, R. De Matos Simoes, A. Kupczok, M. Gube, E. Kothe, K. Voigt, A. Von Haeseler, Molecular Biology and Evolution 29 (2012) 1319–1334.
2012 | Conference Paper | IST-REx-ID: 2930
Towards minimizing k-submodular functions
A. Huber, V. Kolmogorov, in:, Springer, 2012, pp. 451–462.
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A. Huber, V. Kolmogorov, in:, Springer, 2012, pp. 451–462.
2012 | Journal Article | IST-REx-ID: 2959
Geometry of maximum likelihood estimation in Gaussian graphical models
C. Uhler, Annals of Statistics 40 (2012) 238–261.
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C. Uhler, Annals of Statistics 40 (2012) 238–261.
2012 | Journal Article | IST-REx-ID: 2954
A deconvolution based method with high sensitivity and temporal resolution for detection of spontaneous synaptic currents in vitro and in vivo
A. Pernia-Andrade, S. Goswami, Y. Stickler, U. Fröbe, A. Schlögl, P.M. Jonas, Biophysical Journal 103 (2012) 1429–1439.
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| PubMed | Europe PMC
A. Pernia-Andrade, S. Goswami, Y. Stickler, U. Fröbe, A. Schlögl, P.M. Jonas, Biophysical Journal 103 (2012) 1429–1439.
2012 | Journal Article | IST-REx-ID: 2966
The dynamics of male-male competition in Cardiocondyla obscurior ants
S. Cremer, M. Suefuji, A. Schrempf, J. Heinze, BMC Ecology 12 (2012).
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S. Cremer, M. Suefuji, A. Schrempf, J. Heinze, BMC Ecology 12 (2012).
2012 | Journal Article | IST-REx-ID: 3159
Hierarchical ordering of reticular networks
Y. Mileyko, H. Edelsbrunner, C. Price, J. Weitz, PLoS One 7 (2012).
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Y. Mileyko, H. Edelsbrunner, C. Price, J. Weitz, PLoS One 7 (2012).
2012 | Journal Article | IST-REx-ID: 3161
Suppression of ribosomal function triggers innate immune signaling through activation of the NLRP3 inflammasome
M. Vyleta, J. Wong, B. Magun, PLoS One 7 (2012).
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M. Vyleta, J. Wong, B. Magun, PLoS One 7 (2012).
2012 | Conference Paper | IST-REx-ID: 3123
Explicit mesh surfaces for particle based fluids
J. Yu, C.J. Wojtan, G. Turk, C. Yap, in:, Computer Graphics Forum, Blackwell Publishing, 2012, pp. 815–824.
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J. Yu, C.J. Wojtan, G. Turk, C. Yap, in:, Computer Graphics Forum, Blackwell Publishing, 2012, pp. 815–824.
2012 | Journal Article | IST-REx-ID: 3130
Patterns of evolutionary conservation of essential genes correlate with their compensability
T. Bergmiller, M. Ackermann, O. Silander, PLoS Genetics 8 (2012).
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T. Bergmiller, M. Ackermann, O. Silander, PLoS Genetics 8 (2012).
2012 | Journal Article | IST-REx-ID: 3166
Amino acid fermentation at the origin of the genetic code
H. Vladar, Biology Direct 7 (2012).
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H. Vladar, Biology Direct 7 (2012).
2012 | Journal Article | IST-REx-ID: 3262
Optimizing information flow in small genetic networks. III. A self-interacting gene
G. Tkacik, A. Walczak, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 85 (2012).
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G. Tkacik, A. Walczak, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 85 (2012).
2012 | Journal Article | IST-REx-ID: 3274
A 2.5D-Fourier-BEM model for vibrations in a tunnel running through layered anisotropic soil
G. Rieckh, W. Kreuzer, H. Waubke, P. Balazs, Engineering Analysis with Boundary Elements 36 (2012) 960–967.
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G. Rieckh, W. Kreuzer, H. Waubke, P. Balazs, Engineering Analysis with Boundary Elements 36 (2012) 960–967.
2012 | Conference Paper | IST-REx-ID: 3279
Hardness preserving constructions of pseudorandom functions
A. Jain, K.Z. Pietrzak, A. Tentes, in:, Springer, 2012, pp. 369–382.
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A. Jain, K.Z. Pietrzak, A. Tentes, in:, Springer, 2012, pp. 369–382.
2012 | Conference Paper | IST-REx-ID: 3281
Lossy functions do not amplify well
K.Z. Pietrzak, A. Rosen, G. Segev, in:, Springer, 2012, pp. 458–475.
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K.Z. Pietrzak, A. Rosen, G. Segev, in:, Springer, 2012, pp. 458–475.
2012 | Conference Paper | IST-REx-ID: 3250
Cryptography from learning parity with noise
K.Z. Pietrzak, in:, Springer, 2012, pp. 99–114.
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K.Z. Pietrzak, in:, Springer, 2012, pp. 99–114.
2012 | Journal Article | IST-REx-ID: 3248
Real-time detection of colored objects in multiple camera streams with off-the-shelf hardware components
C. Lampert, J. Peters, Journal of Real-Time Image Processing 7 (2012) 31–41.
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C. Lampert, J. Peters, Journal of Real-Time Image Processing 7 (2012) 31–41.
2012 | Journal Article | IST-REx-ID: 3243
Zwischen Technologie und Information
P. Danowski, Büchereiperspektiven 1/2012 (2012) 11.
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P. Danowski, Büchereiperspektiven 1/2012 (2012) 11.
2012 | Conference Paper | IST-REx-ID: 2891
Approximate determinization of quantitative automata
U. Boker, T.A. Henzinger, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2012, pp. 362–373.
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U. Boker, T.A. Henzinger, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2012, pp. 362–373.
2012 | Conference Paper | IST-REx-ID: 2916
Interface Simulation Distances
P. Cerny, M. Chmelik, T.A. Henzinger, A. Radhakrishna, in:, Electronic Proceedings in Theoretical Computer Science, EPTCS, 2012, pp. 29–42.
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P. Cerny, M. Chmelik, T.A. Henzinger, A. Radhakrishna, in:, Electronic Proceedings in Theoretical Computer Science, EPTCS, 2012, pp. 29–42.
2012 | Conference Paper | IST-REx-ID: 2942
Independent implementability of viewpoints
T.A. Henzinger, D. Nickovic, in:, Conference Proceedings Monterey Workshop 2012, Springer, 2012, pp. 380–395.
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T.A. Henzinger, D. Nickovic, in:, Conference Proceedings Monterey Workshop 2012, Springer, 2012, pp. 380–395.
2012 | Conference Paper | IST-REx-ID: 2947
Equivalence of games with probabilistic uncertainty and partial observation games
K. Chatterjee, M. Chmelik, R. Majumdar, in:, Springer, 2012, pp. 385–399.
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K. Chatterjee, M. Chmelik, R. Majumdar, in:, Springer, 2012, pp. 385–399.
2012 | Journal Article | IST-REx-ID: 3128
A survey of partial-observation stochastic parity games
K. Chatterjee, L. Doyen, T.A. Henzinger, Formal Methods in System Design 43 (2012) 268–284.
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K. Chatterjee, L. Doyen, T.A. Henzinger, Formal Methods in System Design 43 (2012) 268–284.
2012 | Conference Paper | IST-REx-ID: 3135
Efficient controller synthesis for consumption games with multiple resource types
B. Brázdil, K. Chatterjee, A. Kučera, P. Novotny, in:, Springer, 2012, pp. 23–38.
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B. Brázdil, K. Chatterjee, A. Kučera, P. Novotny, in:, Springer, 2012, pp. 23–38.