Please note that IST Research Explorer no longer supports Internet Explorer versions 8 or 9 (or earlier).
We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.
2872 Publications
2013 | Journal Article | IST-REx-ID: 527
Modeling framework for the establishment of the apical-basal embryonic axis in plants
K.T. Wabnik, H. Robert, R. Smith, J. Friml, Current Biology 23 (2013) 2513–2518.
View
| DOI
K.T. Wabnik, H. Robert, R. Smith, J. Friml, Current Biology 23 (2013) 2513–2518.
2013 | Journal Article | IST-REx-ID: 528
Local auxin sources orient the apical basal axis in arabidopsis embryos
H. Robert, P. Grones, A. Stepanova, L. Robles, A. Lokerse, J. Alonso, D. Weijers, J. Friml, Current Biology 23 (2013) 2506–2512.
View
| DOI
H. Robert, P. Grones, A. Stepanova, L. Robles, A. Lokerse, J. Alonso, D. Weijers, J. Friml, Current Biology 23 (2013) 2506–2512.
2013 | Technical Report | IST-REx-ID: 5399 | 
TTP: Tool for Tumor Progression
J. Reiter, I. Bozic, K. Chatterjee, M. Nowak, TTP: Tool for Tumor Progression, IST Austria, 2013.
View
| Files available
| DOI
J. Reiter, I. Bozic, K. Chatterjee, M. Nowak, TTP: Tool for Tumor Progression, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5400 |
What is decidable about partially observable Markov decision processes with ω-regular objectives
K. Chatterjee, M. Chmelik, M. Tracol, What Is Decidable about Partially Observable Markov Decision Processes with ω-Regular Objectives, IST Austria, 2013.
View
| Files available
| DOI
K. Chatterjee, M. Chmelik, M. Tracol, What Is Decidable about Partially Observable Markov Decision Processes with ω-Regular Objectives, IST Austria, 2013.
2013 | Report | IST-REx-ID: 5401 |
Initiatives and projects related to RD
J. Porsche, Initiatives and Projects Related to RD, IST Austria, 2013.
View
| Files available
J. Porsche, Initiatives and Projects Related to RD, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5402 |
How free is your linearizable concurrent data structure?
T.A. Henzinger, A. Sezgin, How Free Is Your Linearizable Concurrent Data Structure?, IST Austria, 2013.
View
| Files available
| DOI
T.A. Henzinger, A. Sezgin, How Free Is Your Linearizable Concurrent Data Structure?, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5403 |
Qualitative analysis of concurrent mean-payoff games
K. Chatterjee, R. Ibsen-Jensen, Qualitative Analysis of Concurrent Mean-Payoff Games, IST Austria, 2013.
View
| Files available
| DOI
K. Chatterjee, R. Ibsen-Jensen, Qualitative Analysis of Concurrent Mean-Payoff Games, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5404 |
The complexity of ergodic games
K. Chatterjee, R. Ibsen-Jensen, The Complexity of Ergodic Games, IST Austria, 2013.
View
| Files available
| DOI
K. Chatterjee, R. Ibsen-Jensen, The Complexity of Ergodic Games, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5405 |
Perfect-information stochastic mean-payoff parity games
K. Chatterjee, L. Doyen, H. Gimbert, Y. Oualhadj, Perfect-Information Stochastic Mean-Payoff Parity Games, IST Austria, 2013.
View
| Files available
| DOI
K. Chatterjee, L. Doyen, H. Gimbert, Y. Oualhadj, Perfect-Information Stochastic Mean-Payoff Parity Games, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5406 |
Distributed synthesis for LTL Fragments
K. Chatterjee, T.A. Henzinger, J. Otop, A. Pavlogiannis, Distributed Synthesis for LTL Fragments, IST Austria, 2013.
View
| Files available
| DOI
K. Chatterjee, T.A. Henzinger, J. Otop, A. Pavlogiannis, Distributed Synthesis for LTL Fragments, IST Austria, 2013.
2013 | Report | IST-REx-ID: 5407 |
Technical requirements and features
J. Porsche, Technical Requirements and Features, IST Austria, 2013.
View
| Files available
J. Porsche, Technical Requirements and Features, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5408 |
The complexity of partial-observation stochastic parity games with finite-memory strategies
K. Chatterjee, L. Doyen, S. Nain, M. Vardi, The Complexity of Partial-Observation Stochastic Parity Games with Finite-Memory Strategies, IST Austria, 2013.
View
| Files available
| DOI
K. Chatterjee, L. Doyen, S. Nain, M. Vardi, The Complexity of Partial-Observation Stochastic Parity Games with Finite-Memory Strategies, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5409 |
Edit distance for timed automata
K. Chatterjee, R. Ibsen-Jensen, R. Majumdar, Edit Distance for Timed Automata, IST Austria, 2013.
View
| Files available
| DOI
K. Chatterjee, R. Ibsen-Jensen, R. Majumdar, Edit Distance for Timed Automata, IST Austria, 2013.
2013 | Technical Report | IST-REx-ID: 5410 |
Automatic generation of alternative starting positions for traditional board games
U. Ahmed, K. Chatterjee, S. Gulwani, Automatic Generation of Alternative Starting Positions for Traditional Board Games, IST Austria, 2013.
View
| Files available
| DOI
U. Ahmed, K. Chatterjee, S. Gulwani, Automatic Generation of Alternative Starting Positions for Traditional Board Games, IST Austria, 2013.
2013 | Book Chapter | IST-REx-ID: 5747 |
Automatic Linearizability Proofs of Concurrent Objects with Cooperating Updates
C. Dragoi, A. Gupta, T.A. Henzinger, in:, Computer Aided Verification, Springer Berlin Heidelberg, Berlin, Heidelberg, 2013, pp. 174–190.
View
| Files available
| DOI
C. Dragoi, A. Gupta, T.A. Henzinger, in:, Computer Aided Verification, Springer Berlin Heidelberg, Berlin, Heidelberg, 2013, pp. 174–190.
2013 | Journal Article | IST-REx-ID: 2698 |
Stability and semiclassics in self-generated fields
L. Erdös, S. Fournais, J. Solovej, Journal of the European Mathematical Society 15 (2013) 2093–2113.
View
| DOI
| Download Preprint (ext.)
| arXiv
L. Erdös, S. Fournais, J. Solovej, Journal of the European Mathematical Society 15 (2013) 2093–2113.
2013 | Conference Paper | IST-REx-ID: 2718 |
Can quantitative and population genetics help us understand evolutionary computation?
N.H. Barton, T. Paixao, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 1573–1580.
View
| Files available
| DOI
N.H. Barton, T. Paixao, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 1573–1580.
2013 | Conference Paper | IST-REx-ID: 2719
A variance decomposition approach to the analysis of genetic algorithms
T. Paixao, N.H. Barton, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 845–852.
View
| DOI
T. Paixao, N.H. Barton, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 845–852.
2013 | Journal Article | IST-REx-ID: 2720 |
Accumulation of spontaneous mutations in the ciliate Tetrahymena thermophila
H. Long, T. Paixao, R. Azevedo, R. Zufall, Genetics 195 (2013) 527–540.
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
H. Long, T. Paixao, R. Azevedo, R. Zufall, Genetics 195 (2013) 527–540.
2013 | Journal Article | IST-REx-ID: 2782 |
Local eigenvalue density for general MANOVA matrices
L. Erdös, B. Farrell, Journal of Statistical Physics 152 (2013) 1003–1032.
View
| DOI
| Download Preprint (ext.)
| arXiv
L. Erdös, B. Farrell, Journal of Statistical Physics 152 (2013) 1003–1032.
2013 | Journal Article | IST-REx-ID: 2806
High-precision Taylor-Couette experiment to study subcritical transitions and the role of boundary conditions and size effects
K. Avila, B. Hof, Review of Scientific Instruments 84 (2013).
View
| DOI
K. Avila, B. Hof, Review of Scientific Instruments 84 (2013).
2013 | Conference Paper | IST-REx-ID: 2807 |
Extending continuous maps: Polynomiality and undecidability
M. Čadek, M. Krcál, J. Matoušek, L. Vokřínek, U. Wagner, in:, 45th Annual ACM Symposium on Theory of Computing, ACM, 2013, pp. 595–604.
View
| Files available
| DOI
M. Čadek, M. Krcál, J. Matoušek, L. Vokřínek, U. Wagner, in:, 45th Annual ACM Symposium on Theory of Computing, ACM, 2013, pp. 595–604.
2013 | Journal Article | IST-REx-ID: 2808 |
The moss physcomitrella patens reproductive organ development is highly organized, affected by the two SHI/STY genes and by the level of active auxin in the SHI/STY expression domain
K. Landberg, E. Pederson, T. Viaene, B. Bozorg, J. Friml, H. Jönsson, M. Thelander, E. Sundberg, Plant Physiology 162 (2013) 1406–1419.
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
K. Landberg, E. Pederson, T. Viaene, B. Bozorg, J. Friml, H. Jönsson, M. Thelander, E. Sundberg, Plant Physiology 162 (2013) 1406–1419.
2013 | Journal Article | IST-REx-ID: 2810 |
Environmental dependence of genetic constraint
M. de Vos, F. Poelwijk, N. Battich, J. Ndika, S. Tans, PLoS Genetics 9 (2013).
View
| Files available
| DOI
M. de Vos, F. Poelwijk, N. Battich, J. Ndika, S. Tans, PLoS Genetics 9 (2013).
2013 | Journal Article | IST-REx-ID: 2811 |
Nature of laminar-turbulence intermittency in shear flows
M. Avila, B. Hof, Physical Review E 87 (2013).
View
| DOI
| Download Preprint (ext.)
| arXiv
M. Avila, B. Hof, Physical Review E 87 (2013).
2013 | Conference Paper | IST-REx-ID: 2812 |
Homological reconstruction and simplification in R3
D. Attali, U. Bauer, O. Devillers, M. Glisse, A. Lieutier, in:, Proceedings of the 29th Annual Symposium on Computational Geometry, ACM, 2013, pp. 117–125.
View
| Files available
| DOI
| Download Submitted Version (ext.)
D. Attali, U. Bauer, O. Devillers, M. Glisse, A. Lieutier, in:, Proceedings of the 29th Annual Symposium on Computational Geometry, ACM, 2013, pp. 117–125.
2013 | Journal Article | IST-REx-ID: 2813 |
Elasto-inertial turbulence
D. Samanta, Y. Dubief, M. Holzner, C. Schäfer, A. Morozov, C. Wagner, B. Hof, PNAS 110 (2013) 10557–10562.
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
D. Samanta, Y. Dubief, M. Holzner, C. Schäfer, A. Morozov, C. Wagner, B. Hof, PNAS 110 (2013) 10557–10562.
2013 | Journal Article | IST-REx-ID: 2814 |
The complexity of coverage
K. Chatterjee, L. Alfaro, R. Majumdar, International Journal of Foundations of Computer Science 24 (2013) 165–185.
View
| DOI
| Download Preprint (ext.)
| arXiv
K. Chatterjee, L. Alfaro, R. Majumdar, International Journal of Foundations of Computer Science 24 (2013) 165–185.
2013 | Journal Article | IST-REx-ID: 2815
Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions
H. Edelsbrunner, B.T. Fasy, G. Rote, Discrete & Computational Geometry 49 (2013) 797–822.
View
| Files available
| DOI
H. Edelsbrunner, B.T. Fasy, G. Rote, Discrete & Computational Geometry 49 (2013) 797–822.
2013 | Journal Article | IST-REx-ID: 2816 |
Evolutionary dynamics of cancer in response to targeted combination therapy
I. Božić, J. Reiter, B. Allen, T. Antal, K. Chatterjee, P. Shah, Y. Moon, A. Yaqubie, N. Kelly, D. Le, E. Lipson, P. Chapman, L. Diaz, B. Vogelstein, M. Nowak, ELife 2 (2013).
View
| Files available
| DOI
I. Božić, J. Reiter, B. Allen, T. Antal, K. Chatterjee, P. Shah, Y. Moon, A. Yaqubie, N. Kelly, D. Le, E. Lipson, P. Chapman, L. Diaz, B. Vogelstein, M. Nowak, ELife 2 (2013).
2013 | Journal Article | IST-REx-ID: 2817 |
Density games
S. Novak, K. Chatterjee, M. Nowak, Journal of Theoretical Biology 334 (2013) 26–34.
View
| Files available
| DOI
S. Novak, K. Chatterjee, M. Nowak, Journal of Theoretical Biology 334 (2013) 26–34.
2013 | Journal Article | IST-REx-ID: 2818 |
Learning quadratic receptive fields from neural responses to natural stimuli
K. Rajan, O. Marre, G. Tkacik, Neural Computation 25 (2013) 1661–1692.
View
| DOI
| Download Preprint (ext.)
| arXiv
K. Rajan, O. Marre, G. Tkacik, Neural Computation 25 (2013) 1661–1692.
2013 | Conference Paper | IST-REx-ID: 2819 |
Quantitative timed simulation functions and refinement metrics for real-time systems
K. Chatterjee, V. Prabhu, in:, Proceedings of the 16th International Conference on Hybrid Systems: Computation and Control, Springer, 2013, pp. 273–282.
View
| DOI
| Download Preprint (ext.)
K. Chatterjee, V. Prabhu, in:, Proceedings of the 16th International Conference on Hybrid Systems: Computation and Control, Springer, 2013, pp. 273–282.
2013 | Conference Paper | IST-REx-ID: 2820
Automated analysis of real-time scheduling using graph games
K. Chatterjee, A. Kößler, U. Schmid, in:, Proceedings of the 16th International Conference on Hybrid Systems: Computation and Control, ACM, 2013, pp. 163–172.
View
| Files available
| DOI
K. Chatterjee, A. Kößler, U. Schmid, in:, Proceedings of the 16th International Conference on Hybrid Systems: Computation and Control, ACM, 2013, pp. 163–172.
2013 | Journal Article | IST-REx-ID: 2821 |
A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis
E. Remy, T. Cabrito, P. Baster, R. Batista, M. Teixeira, J. Friml, I. Sá Correia, P. Duque, Plant Cell 25 (2013) 901–926.
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
E. Remy, T. Cabrito, P. Baster, R. Batista, M. Teixeira, J. Friml, I. Sá Correia, P. Duque, Plant Cell 25 (2013) 901–926.
2013 | Journal Article | IST-REx-ID: 2822 |
3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture
C. Topp, A. Iyer Pascuzzi, J. Anderson, C. Lee, P. Zurek, O. Symonova, Y. Zheng, A. Bucksch, Y. Mileyko, T. Galkovskyi, B. Moore, J. Harer, H. Edelsbrunner, T. Mitchell Olds, J. Weitz, P. Benfey, PNAS 110 (2013) E1695–E1704.
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
C. Topp, A. Iyer Pascuzzi, J. Anderson, C. Lee, P. Zurek, O. Symonova, Y. Zheng, A. Bucksch, Y. Mileyko, T. Galkovskyi, B. Moore, J. Harer, H. Edelsbrunner, T. Mitchell Olds, J. Weitz, P. Benfey, PNAS 110 (2013) E1695–E1704.
2013 | Journal Article | IST-REx-ID: 2823
Post-fire recovery of revegetated woodland communities in south-eastern Australia
M. Pickup, S. Wilson, D. Freudenberger, N. Nicholls, L. Gould, S. Hnatiuk, J. Delandre, Austral Ecology 38 (2013) 300–312.
View
| DOI
M. Pickup, S. Wilson, D. Freudenberger, N. Nicholls, L. Gould, S. Hnatiuk, J. Delandre, Austral Ecology 38 (2013) 300–312.
2013 | Journal Article | IST-REx-ID: 2824
Synthesis of memory-efficient, clock-memory free, and non-Zeno safety controllers for timed systems
K. Chatterjee, V. Prabhu, Information and Computation 228–229 (2013) 83–119.
View
| DOI
K. Chatterjee, V. Prabhu, Information and Computation 228–229 (2013) 83–119.
2013 | Journal Article | IST-REx-ID: 2826 |
Mutations in SCO2 are associated with autosomal-dominant high-grade myopia
K. Tran Viet, C. Powell, V. Barathi, T. Klemm, S. Maurer Stroh, V. Limviphuvadh, V. Soler, C. Ho, T. Yanovitch, G. Schneider, Y. Li, E. Nading, R. Metlapally, S. Saw, L. Goh, S. Rozen, T. Young, American Journal of Human Genetics 92 (2013) 820–826.
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
K. Tran Viet, C. Powell, V. Barathi, T. Klemm, S. Maurer Stroh, V. Limviphuvadh, V. Soler, C. Ho, T. Yanovitch, G. Schneider, Y. Li, E. Nading, R. Metlapally, S. Saw, L. Goh, S. Rozen, T. Young, American Journal of Human Genetics 92 (2013) 820–826.
2013 | Journal Article | IST-REx-ID: 2827 |
Salicylic acid interferes with clathrin-mediated endocytic protein trafficking
Y. Du, R. Tejos, M. Beck, E. Himschoot, H. Li, S. Robatzek, S. Vanneste, J. Friml, PNAS 110 (2013) 7946–7951.
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
Y. Du, R. Tejos, M. Beck, E. Himschoot, H. Li, S. Robatzek, S. Vanneste, J. Friml, PNAS 110 (2013) 7946–7951.
2013 | Journal Article | IST-REx-ID: 2828 |
The complexity of conservative valued CSPs
V. Kolmogorov, S. Živný, Journal of the ACM 60 (2013).
View
| DOI
| Download Preprint (ext.)
| arXiv
V. Kolmogorov, S. Živný, Journal of the ACM 60 (2013).
2013 | Journal Article | IST-REx-ID: 2829 |
Scale invariance at the onset of turbulence in couette flow
L. Shi, M. Avila, B. Hof, Physical Review Letters 110 (2013).
View
| DOI
| Download Preprint (ext.)
| arXiv
L. Shi, M. Avila, B. Hof, Physical Review Letters 110 (2013).
2013 | Journal Article | IST-REx-ID: 2830
A conduit to amplify innate immunity
C. Moussion, M.K. Sixt, Immunity 38 (2013) 853–854.
View
| DOI
C. Moussion, M.K. Sixt, Immunity 38 (2013) 853–854.
2013 | Journal Article | IST-REx-ID: 2831 |
Symbolic algorithms for qualitative analysis of Markov decision processes with Büchi objectives
K. Chatterjee, M. Henzinger, M. Joglekar, N. Shah, Formal Methods in System Design 42 (2013) 301–327.
View
| Files available
| DOI
| Download Preprint (ext.)
| arXiv
K. Chatterjee, M. Henzinger, M. Joglekar, N. Shah, Formal Methods in System Design 42 (2013) 301–327.
2013 | Journal Article | IST-REx-ID: 2832 |
Cell polarity and patterning by PIN trafficking through early endosomal compartments in arabidopsis thaliana
H. Tanaka, S. Kitakura, H. Rakusová, T. Uemura, M. Feraru, R. De Rycke, S. Robert, T. Kakimoto, J. Friml, PLoS Genetics 9 (2013).
View
| Files available
| DOI
H. Tanaka, S. Kitakura, H. Rakusová, T. Uemura, M. Feraru, R. De Rycke, S. Robert, T. Kakimoto, J. Friml, PLoS Genetics 9 (2013).
2013 | Journal Article | IST-REx-ID: 2833
Forces in tissue morphogenesis and patterning
C.-P.J. Heisenberg, Y. Bellaïche, Cell 153 (2013) 948–962.
View
| DOI
C.-P.J. Heisenberg, Y. Bellaïche, Cell 153 (2013) 948–962.
2013 | Journal Article | IST-REx-ID: 2834 |
Streamwise-localized solutions at the onset of turbulence in pipe flow
M. Avila, F. Mellibovsky, N. Roland, B. Hof, Physical Review Letters 110 (2013).
View
| DOI
| Download Preprint (ext.)
| arXiv
M. Avila, F. Mellibovsky, N. Roland, B. Hof, Physical Review Letters 110 (2013).
2013 | Journal Article | IST-REx-ID: 2835 |
Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis
H. Yu, M. Karampelias, S. Robert, W. Peer, R. Swarup, S. Ye, L. Ge, J. Cohen, A. Murphy, J. Friml, M. Estelle, Plant Physiology 162 (2013) 965–976.
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
H. Yu, M. Karampelias, S. Robert, W. Peer, R. Swarup, S. Ye, L. Ge, J. Cohen, A. Murphy, J. Friml, M. Estelle, Plant Physiology 162 (2013) 965–976.
2013 | Journal Article | IST-REx-ID: 2836 |
Assume-guarantee synthesis for digital contract signing
K. Chatterjee, V. Raman, Formal Aspects of Computing 26 (2013) 825–859.
View
| DOI
| Download Preprint (ext.)
| arXiv
K. Chatterjee, V. Raman, Formal Aspects of Computing 26 (2013) 825–859.
2013 | Journal Article | IST-REx-ID: 2837 |
The local semicircle law for a general class of random matrices
L. Erdös, A. Knowles, H. Yau, J. Yin, Electronic Journal of Probability 18 (2013) 1–58.
View
| Files available
| DOI
L. Erdös, A. Knowles, H. Yau, J. Yin, Electronic Journal of Probability 18 (2013) 1–58.