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3022 Publications
2014 | Journal Article | IST-REx-ID: 2253 |

Expression of TWISTED DWARF1 lacking its in-plane membrane anchor leads to increased cell elongation and hypermorphic growth
A. Bailly, B. Wang, M. Zwiewka, S. Pollmann, D. Schenck, H. Lüthen, A. Schulz, J. Friml, M. Geisler, Plant Journal 77 (2014) 108–118.
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A. Bailly, B. Wang, M. Zwiewka, S. Pollmann, D. Schenck, H. Lüthen, A. Schulz, J. Friml, M. Geisler, Plant Journal 77 (2014) 108–118.
2014 | Journal Article | IST-REx-ID: 2254 |

Theta-gamma-modulated synaptic currents in hippocampal granule cells in vivo define a mechanism for network oscillations
A. Pernia-Andrade, P.M. Jonas, Neuron 81 (2014) 140–152.
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A. Pernia-Andrade, P.M. Jonas, Neuron 81 (2014) 140–152.
2014 | Book Chapter | IST-REx-ID: 2245
Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters
S. Simon, P. Skůpa, P. Dobrev, J. Petrášek, E. Zažímalová, J. Friml, in:, G. Hicks, S. Robert (Eds.), Plant Chemical Genomics, Springer, 2014, pp. 255–264.
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S. Simon, P. Skůpa, P. Dobrev, J. Petrášek, E. Zažímalová, J. Friml, in:, G. Hicks, S. Robert (Eds.), Plant Chemical Genomics, Springer, 2014, pp. 255–264.
2014 | Journal Article | IST-REx-ID: 2246 |

Alternating traps in Muller and parity games
A. Grinshpun, P. Phalitnonkiat, S. Rubin, A. Tarfulea, Theoretical Computer Science 521 (2014) 73–91.
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A. Grinshpun, P. Phalitnonkiat, S. Rubin, A. Tarfulea, Theoretical Computer Science 521 (2014) 73–91.
2014 | Journal Article | IST-REx-ID: 2261 |

DICE, an efficient system for iterative genomic editing in human pluripotent stem cells
F. Zhu, M. Gamboa, A. Farruggio, S. Hippenmeyer, B. Tasic, B. Schüle, Y. Chen Tsai, M. Calos, Nucleic Acids Research 42 (2014).
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F. Zhu, M. Gamboa, A. Farruggio, S. Hippenmeyer, B. Tasic, B. Schüle, Y. Chen Tsai, M. Calos, Nucleic Acids Research 42 (2014).
2014 | Book Chapter | IST-REx-ID: 2265
Molecular pathways controlling the sequential steps of cortical projection neuron migration
S. Hippenmeyer, in:, L. Nguyen (Ed.), Cellular and Molecular Control of Neuronal Migration, Springer, 2014, pp. 1–24.
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S. Hippenmeyer, in:, L. Nguyen (Ed.), Cellular and Molecular Control of Neuronal Migration, Springer, 2014, pp. 1–24.
2014 | Conference Paper | IST-REx-ID: 2275 |

Partial enumeration and curvature regularization
C. Olsson, J. Ulen, Y. Boykov, V. Kolmogorov, in:, IEEE, 2014, pp. 2936–2943.
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C. Olsson, J. Ulen, Y. Boykov, V. Kolmogorov, in:, IEEE, 2014, pp. 2936–2943.
2014 | Journal Article | IST-REx-ID: 2285 |

Morpho-physiological criteria divide dentate gyrus interneurons into classes
J. Hosp, M. Strüber, Y. Yanagawa, K. Obata, I. Vida, P.M. Jonas, M. Bartos, Hippocampus 23 (2014) 189–203.
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J. Hosp, M. Strüber, Y. Yanagawa, K. Obata, I. Vida, P.M. Jonas, M. Bartos, Hippocampus 23 (2014) 189–203.
2014 | Journal Article | IST-REx-ID: 2716 |

Strategy synthesis for multi-dimensional quantitative objectives
K. Chatterjee, M. Randour, J. Raskin, Acta Informatica 51 (2014) 129–163.
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K. Chatterjee, M. Randour, J. Raskin, Acta Informatica 51 (2014) 129–163.
2014 | Journal Article | IST-REx-ID: 2699 |

Universality of general β-ensembles
L. Erdös, P. Bourgade, H. Yau, Duke Mathematical Journal 163 (2014) 1127–1190.
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L. Erdös, P. Bourgade, H. Yau, Duke Mathematical Journal 163 (2014) 1127–1190.
2014 | Journal Article | IST-REx-ID: 2255 |

Stable length estimates of tube-like shapes
H. Edelsbrunner, F. Pausinger, Journal of Mathematical Imaging and Vision 50 (2014) 164–177.
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H. Edelsbrunner, F. Pausinger, Journal of Mathematical Imaging and Vision 50 (2014) 164–177.
2014 | Conference Paper | IST-REx-ID: 2905 |

Persistent homology: Theory and practice
H. Edelsbrunner, D. Morozovy, in:, European Mathematical Society Publishing House, 2014, pp. 31–50.
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H. Edelsbrunner, D. Morozovy, in:, European Mathematical Society Publishing House, 2014, pp. 31–50.
2014 | Journal Article | IST-REx-ID: 1733 |

Interface simulation distances
P. Cerny, M. Chmelik, T.A. Henzinger, A. Radhakrishna, Theoretical Computer Science 560 (2014) 348–363.
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P. Cerny, M. Chmelik, T.A. Henzinger, A. Radhakrishna, Theoretical Computer Science 560 (2014) 348–363.
2014 | Journal Article | IST-REx-ID: 2141 |

Efficient and dynamic algorithms for alternating Büchi games and maximal end-component decomposition
K. Chatterjee, M. Henzinger, Journal of the ACM 61 (2014).
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K. Chatterjee, M. Henzinger, Journal of the ACM 61 (2014).
2014 | Journal Article | IST-REx-ID: 2852
Robust multi-property combiners for hash functions
M. Fischlin, A. Lehmann, K.Z. Pietrzak, Journal of Cryptology 27 (2014) 397–428.
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M. Fischlin, A. Lehmann, K.Z. Pietrzak, Journal of Cryptology 27 (2014) 397–428.
2014 | Journal Article | IST-REx-ID: 3263 |

Adaptation to changes in higher-order stimulus statistics in the salamander retina
G. Tkačik, A. Ghosh, E. Schneidman, R. Segev, PLoS One 9 (2014).
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G. Tkačik, A. Ghosh, E. Schneidman, R. Segev, PLoS One 9 (2014).
2014 | Conference Paper | IST-REx-ID: 2054
Qualitative concurrent parity games: Bounded rationality
K. Chatterjee, in:, P. Baldan, D. Gorla (Eds.), Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2014, pp. 544–559.
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K. Chatterjee, in:, P. Baldan, D. Gorla (Eds.), Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2014, pp. 544–559.
2014 | Thesis | IST-REx-ID: 1403
Forces driving epithelial spreading in zebrafish epiboly
M. Behrndt, Forces Driving Epithelial Spreading in Zebrafish Epiboly, IST Austria, 2014.
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M. Behrndt, Forces Driving Epithelial Spreading in Zebrafish Epiboly, IST Austria, 2014.
2014 | Journal Article | IST-REx-ID: 2084 |

Spatio-temporally precise activation of engineered receptor tyrosine kinases by light
M. Grusch, K. Schelch, R. Riedler, E. Gschaider-Reichhart, C. Differ, W. Berger, Á. Inglés Prieto, H.L. Janovjak, EMBO Journal 33 (2014) 1713–1726.
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M. Grusch, K. Schelch, R. Riedler, E. Gschaider-Reichhart, C. Differ, W. Berger, Á. Inglés Prieto, H.L. Janovjak, EMBO Journal 33 (2014) 1713–1726.
2014 | Conference Paper | IST-REx-ID: 2157 |

Embeddability in the 3 sphere is decidable
J. Matoušek, E. Sedgwick, M. Tancer, U. Wagner, in:, Proceedings of the Annual Symposium on Computational Geometry, ACM, 2014, pp. 78–84.
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J. Matoušek, E. Sedgwick, M. Tancer, U. Wagner, in:, Proceedings of the Annual Symposium on Computational Geometry, ACM, 2014, pp. 78–84.
2014 | Conference Paper | IST-REx-ID: 475 |

First cycle games
B. Aminof, S. Rubin, in:, Electronic Proceedings in Theoretical Computer Science, EPTCS, Open Publishing Association, 2014, pp. 83–90.
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B. Aminof, S. Rubin, in:, Electronic Proceedings in Theoretical Computer Science, EPTCS, Open Publishing Association, 2014, pp. 83–90.
2014 | Journal Article | IST-REx-ID: 468 |

Invasive parasites habitat change and heavy rainfall reduce breeding success in Darwin's finches
A. Cimadom, A. Ulloa, P. Meidl, M. Zöttl, E. Zöttl, B. Fessl, E. Nemeth, M. Dvorak, F. Cunninghame, S. Tebbich, PLoS One 9 (2014).
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A. Cimadom, A. Ulloa, P. Meidl, M. Zöttl, E. Zöttl, B. Fessl, E. Nemeth, M. Dvorak, F. Cunninghame, S. Tebbich, PLoS One 9 (2014).
2014 | Journal Article | IST-REx-ID: 535 |

Polynomial time algorithms for energy games with special weight structures
K. Chatterjee, M. Henzinger, S. Krinninger, D. Nanongkai, Algorithmica 70 (2014) 457–492.
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K. Chatterjee, M. Henzinger, S. Krinninger, D. Nanongkai, Algorithmica 70 (2014) 457–492.
2014 | Journal Article | IST-REx-ID: 537 |

Fitness consequences of maternal and grandmaternal effects
R. Prizak, T. Ezard, R. Hoyle, Ecology and Evolution 4 (2014) 3139–3145.
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R. Prizak, T. Ezard, R. Hoyle, Ecology and Evolution 4 (2014) 3139–3145.
2014 | Conference Paper | IST-REx-ID: 1903
Partial-observation stochastic reachability and parity games
K. Chatterjee, in:, Springer, 2014, pp. 1–4.
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K. Chatterjee, in:, Springer, 2014, pp. 1–4.
2014 | Journal Article | IST-REx-ID: 2211 |

Partial-observation stochastic games: How to win when belief fails
K. Chatterjee, L. Doyen, ACM Transactions on Computational Logic (TOCL) 15 (2014).
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K. Chatterjee, L. Doyen, ACM Transactions on Computational Logic (TOCL) 15 (2014).
2014 | Journal Article | IST-REx-ID: 2038 |

Temporal specifications with accumulative values
U. Boker, K. Chatterjee, T.A. Henzinger, O. Kupferman, ACM Transactions on Computational Logic (TOCL) 15 (2014).
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U. Boker, K. Chatterjee, T.A. Henzinger, O. Kupferman, ACM Transactions on Computational Logic (TOCL) 15 (2014).
2014 | Conference Paper | IST-REx-ID: 2162 |

The complexity of ergodic mean payoff games
K. Chatterjee, R. Ibsen-Jensen, in:, Springer, 2014, pp. 122–133.
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K. Chatterjee, R. Ibsen-Jensen, in:, Springer, 2014, pp. 122–133.
2014 | Conference Paper | IST-REx-ID: 2212
Perfect-information stochastic mean-payoff parity games
K. Chatterjee, L. Doyen, H. Gimbert, Y. Oualhadj, in:, Springer, 2014, pp. 210–225.
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K. Chatterjee, L. Doyen, H. Gimbert, Y. Oualhadj, in:, Springer, 2014, pp. 210–225.
2014 | Conference Paper | IST-REx-ID: 2213 |

The complexity of partial-observation stochastic parity games with finite-memory strategies
K. Chatterjee, L. Doyen, S. Nain, M. Vardi, in:, Springer, 2014, pp. 242–257.
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K. Chatterjee, L. Doyen, S. Nain, M. Vardi, in:, Springer, 2014, pp. 242–257.
2014 | Conference Paper | IST-REx-ID: 2216 |

Edit distance for timed automata
K. Chatterjee, R. Ibsen-Jensen, R. Majumdar, in:, Springer, 2014, pp. 303–312.
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K. Chatterjee, R. Ibsen-Jensen, R. Majumdar, in:, Springer, 2014, pp. 303–312.
2014 | Conference Paper | IST-REx-ID: 2167 |

Compositional specifications for IOCO testing
P. Daca, T.A. Henzinger, W. Krenn, D. Nickovic, in:, IEEE 7th International Conference on Software Testing, Verification and Validation, IEEE, 2014.
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P. Daca, T.A. Henzinger, W. Krenn, D. Nickovic, in:, IEEE 7th International Conference on Software Testing, Verification and Validation, IEEE, 2014.
2014 | Conference Paper | IST-REx-ID: 2063
CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, M. Chmelik, P. Daca, in:, Springer, 2014, pp. 473–490.
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K. Chatterjee, M. Chmelik, P. Daca, in:, Springer, 2014, pp. 473–490.
2014 | Technical Report | IST-REx-ID: 5413 |

CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
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K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5412 |

CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
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K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5411 |

Compositional specifications for IOCO testing
P. Daca, T.A. Henzinger, W. Krenn, D. Nickovic, Compositional Specifications for IOCO Testing, IST Austria, 2014.
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P. Daca, T.A. Henzinger, W. Krenn, D. Nickovic, Compositional Specifications for IOCO Testing, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5414 |

CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
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K. Chatterjee, P. Daca, M. Chmelik, CEGAR for Qualitative Analysis of Probabilistic Systems, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5418 |

Games with a weak adversary
K. Chatterjee, L. Doyen, Games with a Weak Adversary, IST Austria, 2014.
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K. Chatterjee, L. Doyen, Games with a Weak Adversary, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5419 |

Improved algorithms for reachability and shortest path on low tree-width graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Improved Algorithms for Reachability and Shortest Path on Low Tree-Width Graphs, IST Austria, 2014.
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K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Improved Algorithms for Reachability and Shortest Path on Low Tree-Width Graphs, IST Austria, 2014.
2014 | Conference Paper | IST-REx-ID: 2163 |

Games with a weak adversary
K. Chatterjee, L. Doyen, in:, Lecture Notes in Computer Science, Springer, 2014, pp. 110–121.
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K. Chatterjee, L. Doyen, in:, Lecture Notes in Computer Science, Springer, 2014, pp. 110–121.
2014 | Conference Paper | IST-REx-ID: 2217
Model measuring for hybrid systems
T.A. Henzinger, J. Otop, in:, Proceedings of the 17th International Conference on Hybrid Systems: Computation and Control, Springer, 2014, pp. 213–222.
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T.A. Henzinger, J. Otop, in:, Proceedings of the 17th International Conference on Hybrid Systems: Computation and Control, Springer, 2014, pp. 213–222.
2014 | Technical Report | IST-REx-ID: 5417 |

From model checking to model measuring
T.A. Henzinger, J. Otop, From Model Checking to Model Measuring, IST Austria, 2014.
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T.A. Henzinger, J. Otop, From Model Checking to Model Measuring, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5416 |

Model measuring for hybrid systems
T.A. Henzinger, J. Otop, Model Measuring for Hybrid Systems, IST Austria, 2014.
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T.A. Henzinger, J. Otop, Model Measuring for Hybrid Systems, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5423 |

A framework for automated competitive analysis of on-line scheduling of firm-deadline tasks
K. Chatterjee, A. Kössler, A. Pavlogiannis, U. Schmid, A Framework for Automated Competitive Analysis of On-Line Scheduling of Firm-Deadline Tasks, IST Austria, 2014.
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K. Chatterjee, A. Kössler, A. Pavlogiannis, U. Schmid, A Framework for Automated Competitive Analysis of On-Line Scheduling of Firm-Deadline Tasks, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5420 |

The value 1 problem for concurrent mean-payoff games
K. Chatterjee, R. Ibsen-Jensen, The Value 1 Problem for Concurrent Mean-Payoff Games, IST Austria, 2014.
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K. Chatterjee, R. Ibsen-Jensen, The Value 1 Problem for Concurrent Mean-Payoff Games, IST Austria, 2014.
2014 | Report | IST-REx-ID: 5422 |

Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland
J. Porsche, Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland, none, 2014.
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J. Porsche, Notes from Research Data Alliance Plenary Meeting in Dublin, Ireland, none, 2014.
2014 | Technical Report | IST-REx-ID: 5428 |

Quantitative fair simulation games
K. Chatterjee, T.A. Henzinger, J. Otop, Y. Velner, Quantitative Fair Simulation Games, IST Austria, 2014.
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K. Chatterjee, T.A. Henzinger, J. Otop, Y. Velner, Quantitative Fair Simulation Games, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5426 |

Qualitative analysis of POMDPs with temporal logic specifications for robotics applications
K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, Qualitative Analysis of POMDPs with Temporal Logic Specifications for Robotics Applications, IST Austria, 2014.
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K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, Qualitative Analysis of POMDPs with Temporal Logic Specifications for Robotics Applications, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5427 |

Optimal tree-decomposition balancing and reachability on low treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Optimal Tree-Decomposition Balancing and Reachability on Low Treewidth Graphs, IST Austria, 2014.
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K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Optimal Tree-Decomposition Balancing and Reachability on Low Treewidth Graphs, IST Austria, 2014.
2014 | Technical Report | IST-REx-ID: 5424 |

Qualitative analysis of POMDPs with temporal logic specifications for robotics applications
K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, Qualitative Analysis of POMDPs with Temporal Logic Specifications for Robotics Applications, IST Austria, 2014.
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K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, Qualitative Analysis of POMDPs with Temporal Logic Specifications for Robotics Applications, IST Austria, 2014.