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2979 Publications


2014 | Journal Article | IST-REx-ID: 2169 | OA
Barton, Nicholas H, Sebastian Novak, and Tiago Paixao. “Diverse Forms of Selection in Evolution and Computer Science.” PNAS 111, no. 29 (2014): 10398–99. https://doi.org/10.1073/pnas.1410107111.
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2014 | Journal Article | IST-REx-ID: 2170 | OA
Hearn, Jack, Graham Stone, Lynsey Bunnefeld, James Nicholls, Nicholas H Barton, and Konrad Lohse. “Likelihood-Based Inference of Population History from Low-Coverage de Novo Genome Assemblies.” Molecular Ecology 23, no. 1 (2014): 198–211. https://doi.org/10.1111/mec.12578.
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2014 | Conference Paper | IST-REx-ID: 2171 | OA
Kolesnikov, Alexander, Matthieu Guillaumin, Vittorio Ferrari, and Christoph Lampert. “Closed-Form Approximate CRF Training for Scalable Image Segmentation.” In Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), edited by David Fleet, Tomas Pajdla, Bernt Schiele, and Tinne Tuytelaars, 8691:550–65. Springer, 2014. https://doi.org/10.1007/978-3-319-10578-9_36.
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2014 | Conference Paper | IST-REx-ID: 2172
Sydorov, Vladyslav, Mayu Sakurada, and Christoph Lampert. “Deep Fisher Kernels – End to End Learning of the Fisher Kernel GMM Parameters.” In Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 1402–9. IEEE, 2014. https://doi.org/10.1109/CVPR.2014.182.
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2014 | Conference Paper | IST-REx-ID: 2173 | OA
Khamis, Sameh, and Christoph Lampert. “CoConut: Co-Classification with Output Space Regularization.” In Proceedings of the British Machine Vision Conference 2014. BMVA Press, 2014.
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2014 | Journal Article | IST-REx-ID: 2174 | OA
De Vladar, Harold, and Nicholas H Barton. “Stability and Response of Polygenic Traits to Stabilizing Selection and Mutation.” Genetics 197, no. 2 (2014): 749–67. https://doi.org/10.1534/genetics.113.159111.
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2014 | Journal Article | IST-REx-ID: 2175 | OA
Postiglione, Maria P, and Simon Hippenmeyer. “Monitoring Neurogenesis in the Cerebral Cortex: An Update.” Future Neurology 9, no. 3 (2014): 323–40. https://doi.org/10.2217/fnl.14.18.
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2014 | Journal Article | IST-REx-ID: 2176
Studer, Daniel, Shanting Zhao, Xuejun Chai, Peter M Jonas, Werner Graber, Sigrun Nestel, and Michael Frotscher. “Capture of Activity-Induced Ultrastructural Changes at Synapses by High-Pressure Freezing of Brain Tissue.” Nature Protocols 9, no. 6 (2014): 1480–95. https://doi.org/10.1038/nprot.2014.099.
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2014 | Conference Paper | IST-REx-ID: 2177
Edelsbrunner, Herbert, and Salman Parsa. “On the Computational Complexity of Betti Numbers Reductions from Matrix Rank.” In Proceedings of the Annual ACM-SIAM Symposium on Discrete Algorithms, 152–60. SIAM, 2014. https://doi.org/10.1137/1.9781611973402.11.
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2014 | Journal Article | IST-REx-ID: 2178 | OA
Haws, David, Abraham Martin Del Campo Sanchez, Akimichi Takemura, and Ruriko Yoshida. “Markov Degree of the Three-State Toric Homogeneous Markov Chain Model.” Beitrage Zur Algebra Und Geometrie 55, no. 1 (2014): 161–88. https://doi.org/10.1007/s13366-013-0178-y.
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2014 | Journal Article | IST-REx-ID: 2179 | OA
Ajanki, Oskari H, László Erdös, and Torben H Krüger. “Local Semicircle Law with Imprimitive Variance Matrix.” Electronic Communications in Probability 19 (2014). https://doi.org/10.1214/ECP.v19-3121.
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2014 | Journal Article | IST-REx-ID: 2180 | OA
Bellet, Aurélien, Amaury Habrard, Emilie Morvant, and Marc Sebban. “Learning a Priori Constrained Weighted Majority Votes.” Machine Learning 97, no. 1–2 (2014): 129–54. https://doi.org/10.1007/s10994-014-5462-z.
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2014 | Journal Article | IST-REx-ID: 2183 | OA
Botella Soler, Vicente, and Paul Glendinning. “Hierarchy and Polysynchrony in an Adaptive Network .” Physical Review E Statistical Nonlinear and Soft Matter Physics 89, no. 6 (2014). https://doi.org/10.1103/PhysRevE.89.062809.
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2014 | Journal Article | IST-REx-ID: 2184 | OA
Čadek, Martin, Marek Krcál, Jiří Matoušek, Francis Sergeraert, Lukáš Vokřínek, and Uli Wagner. “Computing All Maps into a Sphere.” Journal of the ACM 61, no. 3 (2014). https://doi.org/10.1145/2597629.
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2014 | Conference Paper | IST-REx-ID: 2185 | OA
Dodis, Yevgeniy, Krzysztof Z Pietrzak, and Daniel Wichs. “Key Derivation without Entropy Waste.” edited by Phong Nguyen and Elisabeth Oswald, 8441:93–110. Springer, 2014. https://doi.org/10.1007/978-3-642-55220-5_6.
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2014 | Journal Article | IST-REx-ID: 2186 | OA
Chen, Thomas, Christian Hainzl, Nataša Pavlović, and Robert Seiringer. “On the Well-Posedness and Scattering for the Gross-Pitaevskii Hierarchy via Quantum de Finetti.” Letters in Mathematical Physics 104, no. 7 (2014): 871–91. https://doi.org/10.1007/s11005-014-0693-2.
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2014 | Journal Article | IST-REx-ID: 2187 | OA
Bloem, Roderick, Krishnendu Chatterjee, Karin Greimel, Thomas A Henzinger, Georg Hofferek, Barbara Jobstmann, Bettina Könighofer, and Robert Könighofer. “Synthesizing Robust Systems.” Acta Informatica 51, no. 3–4 (2014): 193–220. https://doi.org/10.1007/s00236-013-0191-5.
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2014 | Journal Article | IST-REx-ID: 2188 | OA
Kania, Urszula, Matyas Fendrych, and Jiří Friml. “Polar Delivery in Plants; Commonalities and Differences to Animal Epithelial Cells.” Open Biology 4, no. APRIL (2014). https://doi.org/10.1098/rsob.140017.
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2014 | Conference Paper | IST-REx-ID: 2189 | OA
Morvant, Emilie. “Adaptation de Domaine de Vote de Majorité Par Auto-Étiquetage Non Itératif,” 1:49–58. Elsevier, 2014.
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2014 | Conference Paper | IST-REx-ID: 2190 | OA
Esparza, Javier, and Jan Kretinsky. “From LTL to Deterministic Automata: A Safraless Compositional Approach,” 8559:192–208. Springer, 2014. https://doi.org/10.1007/978-3-319-08867-9_13.
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2014 | Journal Article | IST-REx-ID: 2211 | OA
Chatterjee, Krishnendu, and Laurent Doyen. “Partial-Observation Stochastic Games: How to Win When Belief Fails.” ACM Transactions on Computational Logic (TOCL) 15, no. 2 (2014). https://doi.org/10.1145/2579821.
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2014 | Conference Paper | IST-REx-ID: 2212
Chatterjee, Krishnendu, Laurent Doyen, Hugo Gimbert, and Youssouf Oualhadj. “Perfect-Information Stochastic Mean-Payoff Parity Games,” 8412:210–25. Springer, 2014. https://doi.org/10.1007/978-3-642-54830-7_14.
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2014 | Conference Paper | IST-REx-ID: 2213 | OA
Chatterjee, Krishnendu, Laurent Doyen, Sumit Nain, and Moshe Vardi. “The Complexity of Partial-Observation Stochastic Parity Games with Finite-Memory Strategies,” 8412:242–57. Springer, 2014. https://doi.org/10.1007/978-3-642-54830-7_16.
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2014 | Journal Article | IST-REx-ID: 2214 | OA
Stoler Barak, Liat, Christine Moussion, Elias Shezen, Miki Hatzav, Michael K Sixt, and Ronen Alon. “Blood Vessels Pattern Heparan Sulfate Gradients between Their Apical and Basolateral Aspects.” PLoS One 9, no. 1 (2014). https://doi.org/10.1371/journal.pone.0085699.
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2014 | Journal Article | IST-REx-ID: 2215
Renkawitz, Jörg, Claudio Lademann, and Stefan Jentsch. “Mechanisms and Principles of Homology Search during Recombination.” Nature Reviews Molecular Cell Biology 15, no. 6 (2014): 369–83. https://doi.org/10.1038/nrm3805.
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2014 | Conference Paper | IST-REx-ID: 2216 | OA
Chatterjee, Krishnendu, Rasmus Ibsen-Jensen, and Ritankar Majumdar. “Edit Distance for Timed Automata,” 303–12. Springer, 2014. https://doi.org/10.1145/2562059.2562141.
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2014 | Conference Paper | IST-REx-ID: 2217
Henzinger, Thomas A, and Jan Otop. “Model Measuring for Hybrid Systems.” In Proceedings of the 17th International Conference on Hybrid Systems: Computation and Control, 213–22. Springer, 2014. https://doi.org/10.1145/2562059.2562130.
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2014 | Conference Paper | IST-REx-ID: 2218 | OA
Cerny, Pavol, Thomas A Henzinger, Arjun Radhakrishna, Leonid Ryzhyk, and Thorsten Tarrach. “Regression-Free Synthesis for Concurrency,” 8559:568–84. Springer, 2014. https://doi.org/10.1007/978-3-319-08867-9_38.
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2014 | Conference Paper | IST-REx-ID: 2219 | OA
Kiltz, Eike, Daniel Masny, and Krzysztof Z Pietrzak. “Simple Chosen-Ciphertext Security from Low Noise LPN,” 8383:1–18. Springer, 2014. https://doi.org/10.1007/978-3-642-54631-0_1.
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2014 | Journal Article | IST-REx-ID: 2220 | OA
De Vos, Marjon, and Mark Tobias Bollenbach. “Suppressive Drug Interactions between Antifungals.” Chemistry and Biology 21, no. 4 (2014): 439–40. https://doi.org/10.1016/j.chembiol.2014.04.004.
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2014 | Journal Article | IST-REx-ID: 2222
Naramoto, Satoshi, Tomasz Nodzyński, Tomoko Dainobu, Hirotomo Takatsuka, Teruyo Okada, Jirí Friml, and Hiroo Fukuda. “VAN4 Encodes a Putative TRS120 That Is Required for Normal Cell Growth and Vein Development in Arabidopsis.” Plant and Cell Physiology 55, no. 4 (2014): 750–63. https://doi.org/10.1093/pcp/pcu012.
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2014 | Journal Article | IST-REx-ID: 2223 | OA
Tanaka, Hirokazu, Tomasz Nodzyński, Saeko Kitakura, Mugurel Feraru, Michiko Sasabe, Tomomi Ishikawa, Jürgen Kleine Vehn, Tatsuo Kakimoto, and Jiří Friml. “BEX1/ARF1A1C Is Required for BFA-Sensitive Recycling of PIN Auxin Transporters and Auxin-Mediated Development in Arabidopsis.” Plant and Cell Physiology 55, no. 4 (2014): 737–49. https://doi.org/10.1093/pcp/pct196.
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2014 | Journal Article | IST-REx-ID: 2224
Altmeyer, Sebastian. “On Secondary Instabilities Generating Footbridges between Spiral Vortex Flow.” Fluid Dynamics Research 46, no. 2 (2014). https://doi.org/10.1088/0169-5983/46/2/025503.
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2014 | Journal Article | IST-REx-ID: 2225 | OA
Bloemendal, Alex, László Erdös, Antti Knowles, Horng Yau, and Jun Yin. “Isotropic Local Laws for Sample Covariance and Generalized Wigner Matrices.” Electronic Journal of Probability 19 (2014). https://doi.org/10.1214/EJP.v19-3054.
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2014 | Journal Article | IST-REx-ID: 2226 | OA
Shi, Liang, Björn Hof, and Andreas Tilgner. “Transient Growth of Ekman-Couette Flow.” Physical Review E Statistical Nonlinear and Soft Matter Physics 89, no. 1 (2014). https://doi.org/10.1103/PhysRevE.89.013001.
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2014 | Journal Article | IST-REx-ID: 2227
Cires Rodriguez, Eduardo, Matthias Baltisberger, Candela Cuesta, Pablo Vargas, and José Prieto. “Allopolyploid Origin of the Balkan Endemic Ranunculus Wettsteinii (Ranunculaceae) Inferred from Nuclear and Plastid DNA Sequences.” Organisms Diversity and Evolution 14, no. 1 (2014): 1–10. https://doi.org/10.1007/s13127-013-0150-6.
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2014 | Journal Article | IST-REx-ID: 2228 | OA
Hu, Hua, and Peter M Jonas. “A Supercritical Density of Na^+ Channels Ensures Fast Signaling in GABAergic Interneuron Axons.” Nature Neuroscience 17, no. 5 (2014): 686–93. https://doi.org/10.1038/nn.3678.
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2014 | Journal Article | IST-REx-ID: 2229 | OA
Vyleta, Nicholas, and Peter M Jonas. “Loose Coupling between Ca^2+ Channels and Release Sensors at a Plastic Hippocampal Synapse.” Science 343, no. 6171 (2014): 665–70. https://doi.org/10.1126/science.1244811.
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2014 | Journal Article | IST-REx-ID: 2230 | OA
Guzmán, José, Alois Schlögl, and Christoph Schmidt Hieber. “Stimfit: Quantifying Electrophysiological Data with Python.” Frontiers in Neuroinformatics 8, no. FEB (2014). https://doi.org/10.3389/fninf.2014.00016.
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2014 | Journal Article | IST-REx-ID: 2231 | OA
Rieckh, Georg, and Gasper Tkacik. “Noise and Information Transmission in Promoters with Multiple Internal States.” Biophysical Journal 106, no. 5 (2014): 1194–1204. https://doi.org/10.1016/j.bpj.2014.01.014.
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2014 | Journal Article | IST-REx-ID: 2232 | OA
Song, Baofang, and Björn Hof. “Deterministic and Stochastic Aspects of the Transition to Turbulence.” Journal of Statistical Mechanics Theory and Experiment 2014, no. 2 (2014). https://doi.org/10.1088/1742-5468/2014/02/P02001.
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2014 | Journal Article | IST-REx-ID: 2233 | OA
Boker, Udi, and Thomas A Henzinger. “Exact and Approximate Determinization of Discounted-Sum Automata.” Logical Methods in Computer Science 10, no. 1 (2014). https://doi.org/10.2168/LMCS-10(1:10)2014.
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2014 | Journal Article | IST-REx-ID: 2234 | OA
Brázdil, Tomáš, Václav Brožek, Krishnendu Chatterjee, Vojtěch Forejt, and Antonín Kučera. “Markov Decision Processes with Multiple Long-Run Average Objectives.” Logical Methods in Computer Science 10, no. 1 (2014). https://doi.org/10.2168/LMCS-10(1:13)2014.
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2014 | Journal Article | IST-REx-ID: 2235 | OA
Fürst, Matthias, Dino Mcmahon, Juliet Osborne, Robert Paxton, and Mark Brown. “Disease Associations between Honeybees and Bumblebees as a Threat to Wild Pollinators.” Nature 506, no. 7488 (2014): 364–66. https://doi.org/10.1038/nature12977.
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2014 | Conference Paper | IST-REx-ID: 2236 | OA
Jetchev, Dimitar, and Krzysztof Z Pietrzak. “How to Fake Auxiliary Input.” edited by Yehuda Lindell, 8349:566–90. Springer, 2014. https://doi.org/10.1007/978-3-642-54242-8_24.
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2014 | Conference Paper | IST-REx-ID: 2239
Boker, Udi, Thomas A Henzinger, and Arjun Radhakrishna. “Battery Transition Systems,” 49:595–606. ACM, 2014. https://doi.org/10.1145/2535838.2535875.
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2014 | Journal Article | IST-REx-ID: 2240
Gadeyne, Astrid, Clara Sánchez Rodríguez, Steffen Vanneste, Simone Di Rubbo, Henrik Zauber, Kevin Vanneste, Jelle Van Leene, et al. “The TPLATE Adaptor Complex Drives Clathrin-Mediated Endocytosis in Plants.” Cell 156, no. 4 (2014): 691–704. https://doi.org/10.1016/j.cell.2014.01.039.
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2014 | Journal Article | IST-REx-ID: 2241
Beppu, Kaoru, Takuya Sasaki, Kenji Tanaka, Akihiro Yamanaka, Yugo Fukazawa, Ryuichi Shigemoto, and Ko Matsui. “Optogenetic Countering of Glial Acidosis Suppresses Glial Glutamate Release and Ischemic Brain Damage.” Neuron 81, no. 2 (2014): 314–20. https://doi.org/10.1016/j.neuron.2013.11.011.
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2014 | Journal Article | IST-REx-ID: 2242
Dueck, Anne, Alexander Eichner, Michael K Sixt, and Gunter Meister. “A MiR-155-Dependent MicroRNA Hierarchy in Dendritic Cell Maturation and Macrophage Activation.” FEBS Letters 588, no. 4 (2014): 632–40. https://doi.org/10.1016/j.febslet.2014.01.009.
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2014 | Book Chapter | IST-REx-ID: 2245
Simon, Sibu, Petr Skůpa, Petre Dobrev, Jan Petrášek, Eva Zažímalová, and Jirí Friml. “Analyzing the in Vivo Status of Exogenously Applied Auxins: A HPLC-Based Method to Characterize the Intracellularly Localized Auxin Transporters.” In Plant Chemical Genomics, edited by Glenn Hicks and Stéphanie Robert, 1056:255–64. Methods in Molecular Biology. Springer, 2014. https://doi.org/10.1007/978-1-62703-592-7_23.
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