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2760 Publications


2013 | Conference Paper | IST-REx-ID: 2272   OA
Takhanov R, Kolmogorov V. 2013. Inference algorithms for pattern-based CRFs on sequence data. ICML’13 Proceedings of the 30th International Conference on International. ICML: International Conference on Machine Learning, JMLR, vol. 28. 145–153.
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2013 | Journal Article | IST-REx-ID: 2277   OA
Simmons K, Prentice J, Tkacik G, Homann J, Yee H, Palmer S, Nelson P, Balasubramanian V. 2013. Transformation of stimulus correlations by the retina. PLoS Computational Biology. 9(12), e1003344.
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2013 | Conference Paper | IST-REx-ID: 2518   OA
Kolmogorov V. 2013. The power of linear programming for finite-valued CSPs: A constructive characterization. ICALP: Automata, Languages and Programming, LNCS, vol. 7965. 625–636.
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2013 | Conference Paper | IST-REx-ID: 2520   OA
Quadrianto N, Sharmanska V, Knowles D, Ghahramani Z. 2013. The supervised IBP: Neighbourhood preserving infinite latent feature models. Proceedings of the 29th conference uncertainty in Artificial Intelligence. UAI: Uncertainty in Artificial Intelligence 527–536.
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2013 | Journal Article | IST-REx-ID: 2448   OA
Remy E, Baster P, Friml J, Duque P. 2013. ZIFL1.1 transporter modulates polar auxin transport by stabilizing membrane abundance of multiple PINs in Arabidopsis root tip. Plant Signaling & Behavior. 8(10), e25688.
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2013 | Journal Article | IST-REx-ID: 2467   OA
Bernstein G, Wojtan CJ. 2013. Putting holes in holey geometry: Topology change for arbitrary surfaces. ACM Transactions on Graphics. 32(4), 34.
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2013 | Journal Article | IST-REx-ID: 2412   OA
Kupczok A, Bollback JP. 2013. Probabilistic models for CRISPR spacer content evolution . BMC Evolutionary Biology. 13(1), 54–54.
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2013 | Journal Article | IST-REx-ID: 2443
Simon S, Kubeš M, Baster P, Robert S, Dobrev P, Friml J, Petrášek J, Zažímalová E. 2013. Defining the selectivity of processes along the auxin response chain: A study using auxin analogues. New Phytologist. 200(4), 1034–1048.
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2013 | Journal Article | IST-REx-ID: 2823
Pickup M, Wilson S, Freudenberger D, Nicholls N, Gould L, Hnatiuk S, Delandre J. 2013. Post-fire recovery of revegetated woodland communities in south-eastern Australia. Austral Ecology. 38(3), 300–312.
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2013 | Journal Article | IST-REx-ID: 2828   OA
Kolmogorov V, Živný S. 2013. The complexity of conservative valued CSPs. Journal of the ACM. 60(2), 10.
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2013 | Journal Article | IST-REx-ID: 2830
Moussion C, Sixt MK. 2013. A conduit to amplify innate immunity. Immunity. 38(5), 853–854.
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2013 | Journal Article | IST-REx-ID: 2835   OA
Yu H, Karampelias M, Robert S, Peer W, Swarup R, Ye S, Ge L, Cohen J, Murphy A, Friml J, Estelle M. 2013. Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis. Plant Physiology. 162(2), 965–976.
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2013 | Journal Article | IST-REx-ID: 2842   OA
Barton NH, Etheridge A, Kelleher J, Véber A. 2013. Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks. Theoretical Population Biology. 87(1), 105–119.
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2013 | Journal Article | IST-REx-ID: 2816   OA
Božić I, Reiter J, Allen B, Antal T, Chatterjee K, Shah P, Moon Y, Yaqubie A, Kelly N, Le D, Lipson E, Chapman P, Diaz L, Vogelstein B, Nowak M. 2013. Evolutionary dynamics of cancer in response to targeted combination therapy. eLife. 2, e00747.
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2013 | Journal Article | IST-REx-ID: 2811   OA
Avila M, Hof B. 2013. Nature of laminar-turbulence intermittency in shear flows. Physical Review E. 87(6), 063012.
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2013 | Journal Article | IST-REx-ID: 2861
Botella Soler V, Oteo J, Ros J, Glendinning P. 2013. Lyapunov exponent and topological entropy plateaus in piecewise linear maps. Journal of Physics A: Mathematical and Theoretical. 46(12), 125101.
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2013 | Journal Article | IST-REx-ID: 2880   OA
Marhavy P, Vanstraelen M, De Rybel B, Zhaojun D, Bennett M, Beeckman T, Benková E. 2013. Auxin reflux between the endodermis and pericycle promotes lateral root initiation. EMBO Journal. 32(1), 149–158.
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2013 | Conference (Editor) | IST-REx-ID: 2885
Kucera A, Henzinger TA, Nesetril J, Vojnar T, Antos D eds. 2013. Mathematical and Engineering Methods in Computer Science, Springer,p.
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2013 | Conference Paper | IST-REx-ID: 2948   OA
Tommasi T, Quadrianto N, Caputo B, Lampert C. 2013. Beyond dataset bias: Multi-task unaligned shared knowledge transfer. 7724, 1–15.
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2013 | Journal Article | IST-REx-ID: 2859   OA
Bendich P, Edelsbrunner H, Morozov D, Patel A. 2013. Homology and robustness of level and interlevel sets. Homology, Homotopy and Applications. 15(1), 51–72.
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2013 | Encyclopedia Article | IST-REx-ID: 3321
Quadrianto N, Lampert C. 2013. Kernel based learning. Encyclopedia of Systems Biology. vol. 3. 1069–1069.
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2013 | Journal Article | IST-REx-ID: 509   OA
Di Rubbo S, Irani N, Kim S, Xu Z, Gadeyne A, Dejonghe W, Vanhoutte I, Persiau G, Eeckhout D, Simon S, Song K, Kleine Vehn J, Friml J, De Jaeger G, Van Damme D, Hwang I, Russinova E. 2013. The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis. Plant Cell. 25(8), 2986–2997.
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2013 | Journal Article | IST-REx-ID: 528
Robert H, Grones P, Stepanova A, Robles L, Lokerse A, Alonso J, Weijers D, Friml J. 2013. Local auxin sources orient the apical basal axis in arabidopsis embryos. Current Biology. 23(24), 2506–2512.
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2013 | Journal Article | IST-REx-ID: 516   OA
Bargmann B, Vanneste S, Krouk G, Nawy T, Efroni I, Shani E, Choe G, Friml J, Bergmann D, Estelle M, Birnbaum K. 2013. A map of cell type‐specific auxin responses. Molecular Systems Biology. 9(1), 688.
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2013 | Journal Article | IST-REx-ID: 511   OA
Pěnčík A, Simonovik B, Petersson S, Henyková E, Simon S, Greenham K, Zhang Y, Kowalczyk M, Estelle M, Zažímalová E, Novák O, Sandberg G, Ljung K. 2013. Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid. Plant Cell. 25(10), 3858–3870.
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2013 | Technical Report | IST-REx-ID: 5409   OA
Chatterjee K, Ibsen-Jensen R, Majumdar R. 2013. Edit distance for timed automata, IST Austria, 12p.
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2013 | Technical Report | IST-REx-ID: 6440   OA
Henzinger TA, Payer H, Sezgin A. 2013. Replacing competition with cooperation to achieve scalable lock-free FIFO queues , IST Austria, 23p.
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2013 | Conference Paper | IST-REx-ID: 2847   OA
Bansal K, Koskinen E, Wies T, Zufferey D. 2013. Structural Counter Abstraction (eds. N. Piterman & S. Smolka). 7795, 62–77.
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2013 | Technical Report | IST-REx-ID: 5404
Chatterjee K, Ibsen-Jensen R. 2013. The complexity of ergodic games, IST Austria, 29p.
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2013 | Conference Paper | IST-REx-ID: 2328
Henzinger TA, Sezgin A, Vafeiadis V. 2013. Aspect-oriented linearizability proofs. 8052, 242–256.
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2013 | Journal Article | IST-REx-ID: 2854   OA
Chatterjee K, De Alfaro L, Henzinger TA. 2013. Strategy improvement for concurrent reachability and turn based stochastic safety games. Journal of Computer and System Sciences. 79(5), 640–657.
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2013 | Conference Paper | IST-REx-ID: 1387   OA
Boker U, Kuperberg D, Kupferman O, Skrzypczak M. 2013. Nondeterminism in the presence of a diverse or unknown future. 7966(PART 2), 89–100.
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2013 | Conference Paper | IST-REx-ID: 2209
Biedl T, Held M, Huber S. 2013. Recognizing straight skeletons and Voronoi diagrams and reconstructing their input. ISVD: Voronoi Diagrams in Science and Engineering, 2013 10th International Symposium on Voronoi Diagrams in Science and Engineering (ISVD 2013) , 37–46.
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2013 | Conference Paper | IST-REx-ID: 2259   OA
Alwen JF, Krenn S, Pietrzak KZ, Wichs D. 2013. Learning with rounding, revisited: New reduction properties and applications. 8042(1), 57–74.
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2013 | Journal Article | IST-REx-ID: 2280   OA
Uhler C, Wright S. 2013. Packing ellipsoids with overlap. SIAM Review. 55(4), 671–706.
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2013 | Journal Article | IST-REx-ID: 2278
Pérez Gómez R, Slovakova J, Rives Quinto N, Krejčí A, Carmena A. 2013. A serrate-notch-canoe complex mediates essential interactions between glia and neuroepithelial cells during Drosophila optic lobe development. Journal of Cell Science. 126(21), 4873–4884.
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2013 | Report | IST-REx-ID: 2273   OA
Kolmogorov V. 2013. Reweighted message passing revisited, IST Austria,p.
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2013 | Book Chapter | IST-REx-ID: 2413
Valderrama M, Botella Soler V, Le Van Quyen M. 2013. Neuronal oscillations scale up and scale down the brain dynamics . Multiscale Analysis and Nonlinear Dynamics: From Genes to the Brain. , Reviews of Nonlinear Dynamics and Complexity,
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2013 | Conference (Editor) | IST-REx-ID: 2292
Chatterjee K, Sgall J eds. 2013. Mathematical Foundations of Computer Science 2013, Springer,p.
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2013 | Journal Article | IST-REx-ID: 2297   OA
Seiringer R. 2013. Hot topics in cold gases: A mathematical physics perspective. Japanese Journal of Mathematics. 8(2), 185–232.
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2013 | Journal Article | IST-REx-ID: 2300   OA
Giuliani A, Lieb É, Seiringer R. 2013. Realization of stripes and slabs in two and three dimensions. Physical Review B. 88(6), 064401.
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2013 | Journal Article | IST-REx-ID: 2449
Nodzyński T, Feraru M, Hirsch S, De Rycke R, Nicuales C, Van Leene J, De Jaeger G, Vanneste S, Friml J. 2013. Retromer subunits VPS35A and VPS29 mediate prevacuolar compartment (PVC) function in Arabidopsis. Molecular Plant. 6(6), 1849–1862.
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2013 | Journal Article | IST-REx-ID: 2468   OA
Bojsen-Hansen M, Wojtan CJ. 2013. Liquid surface tracking with error compensation. ACM Transactions on Graphics. 32(4), 68.
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2013 | Journal Article | IST-REx-ID: 2470   OA
Čovanová M, Sauer M, Rychtář J, Friml J, Petrášek J, Zažímalová E. 2013. Overexpression of the auxin binding PROTEIN1 modulates PIN-dependent auxin transport in tobacco cells. PLoS One. 8(7), e70050.
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2013 | Journal Article | IST-REx-ID: 2862   OA
Tay H, Schulze S, Compagnon J, Foley F, Heisenberg C-PJ, Yost HJ, Abdelilah Seyfried S, Amack J. 2013. Lethal giant larvae 2 regulates development of the ciliated organ Kupffer’s vesicle. Development. 140(7), 1550–1559.
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2013 | Conference Paper | IST-REx-ID: 2901   OA
Chen C, Kolmogorov V, Yan Z, Metaxas D, Lampert C. 2013. Computing the M most probable modes of a graphical model. AISTATS: Conference on Uncertainty in Artificial Intelligence, JMLR: W&CP, vol. 31. 161–169.
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2013 | Conference Paper | IST-REx-ID: 2906   OA
Kerber M, Edelsbrunner H. 2013. 3D kinetic alpha complexes and their implementation. 2013 Proceedings of the 15th Workshop on Algorithm Engineering and Experiments. ALENEX: Algorithm Engineering and Experiments, ALENEX, 70–77.
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2013 | Journal Article | IST-REx-ID: 2913   OA
Tkacik G, Granot Atedgi E, Segev R, Schneidman E. 2013. Retinal metric: a stimulus distance measure derived from population neural responses. Physical Review Letters. 110(5), 058104.
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2013 | Journal Article | IST-REx-ID: 2829   OA
Shi L, Avila M, Hof B. 2013. Scale invariance at the onset of turbulence in couette flow. Physical Review Letters. 110(20), 204502.
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2013 | Journal Article | IST-REx-ID: 2855   OA
Hippenmeyer S, Johnson R, Luo L. 2013. Mosaic analysis with double markers reveals cell type specific paternal growth dominance. Cell Reports. 3(3), 960–967.
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