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3078 Publications
2015 | Conference Paper | IST-REx-ID: 1605 |

Abstraction-based parameter synthesis for multiaffine systems
S. Bogomolov, C. Schilling, E. Bartocci, G. Batt, H. Kong, R. Grosu, in:, Springer, 2015, pp. 19–35.
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S. Bogomolov, C. Schilling, E. Bartocci, G. Batt, H. Kong, R. Grosu, in:, Springer, 2015, pp. 19–35.
2015 | Conference Paper | IST-REx-ID: 1606
Runtime verification for hybrid analysis tools
L. Nguyen, C. Schilling, S. Bogomolov, T. Johnson, 9333 (2015) 281–286.
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L. Nguyen, C. Schilling, S. Bogomolov, T. Johnson, 9333 (2015) 281–286.
2015 | Conference Paper | IST-REx-ID: 1607 |

Faster algorithms for quantitative verification in constant treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, in:, Springer, 2015, pp. 140–157.
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K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, in:, Springer, 2015, pp. 140–157.
2015 | Conference Paper | IST-REx-ID: 1609 |

The complexity of synthesis from probabilistic components
K. Chatterjee, L. Doyen, M. Vardi, 9135 (2015) 108–120.
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K. Chatterjee, L. Doyen, M. Vardi, 9135 (2015) 108–120.
2015 | Conference Paper | IST-REx-ID: 1610
Edit distance for pushdown automata
K. Chatterjee, T.A. Henzinger, R. Ibsen-Jensen, J. Otop, 9135 (2015) 121–133.
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K. Chatterjee, T.A. Henzinger, R. Ibsen-Jensen, J. Otop, 9135 (2015) 121–133.
2015 | Journal Article | IST-REx-ID: 1611 |

Construction of a robust and sensitive arginine biosensor through ancestral protein reconstruction
J. Whitfield, W. Zhang, M. Herde, B. Clifton, J. Radziejewski, H.L. Janovjak, C. Henneberger, C. Jackson, Protein Science 24 (2015) 1412–1422.
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J. Whitfield, W. Zhang, M. Herde, B. Clifton, J. Radziejewski, H.L. Janovjak, C. Henneberger, C. Jackson, Protein Science 24 (2015) 1412–1422.
2015 | Journal Article | IST-REx-ID: 1614 |

Strength and duration of perisomatic GABAergic inhibition depend on distance between synaptically connected cells
M. Strüber, P.M. Jonas, M. Bartos, PNAS 112 (2015) 1220–1225.
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| PubMed | Europe PMC
M. Strüber, P.M. Jonas, M. Bartos, PNAS 112 (2015) 1220–1225.
2015 | Journal Article | IST-REx-ID: 1615 |

Perturbed hippocampal synaptic inhibition and γ-oscillations in a neuroligin-4 knockout mouse model of autism
M. Hammer, D. Krueger Burg, L. Tuffy, B. Cooper, H. Taschenberger, S. Goswami, H. Ehrenreich, P.M. Jonas, F. Varoqueaux, J. Rhee, N. Brose, Cell Reports 13 (2015) 516–523.
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M. Hammer, D. Krueger Burg, L. Tuffy, B. Cooper, H. Taschenberger, S. Goswami, H. Ehrenreich, P.M. Jonas, F. Varoqueaux, J. Rhee, N. Brose, Cell Reports 13 (2015) 516–523.
2015 | Journal Article | IST-REx-ID: 1618 |

Solution structure of CCL19 and identification of overlapping CCR7 and PSGL-1 binding sites
C. Veldkamp, E. Kiermaier, S. Gabel Eissens, M. Gillitzer, D. Lippner, F. Disilvio, C. Mueller, P. Wantuch, G. Chaffee, M. Famiglietti, D. Zgoba, A. Bailey, Y. Bah, S. Engebretson, D. Graupner, E. Lackner, V. Larosa, T. Medeiros, M. Olson, A. Phillips, H. Pyles, A. Richard, S. Schoeller, B. Touzeau, L. Williams, M.K. Sixt, F. Peterson, Biochemistry 54 (2015) 4163–4166.
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C. Veldkamp, E. Kiermaier, S. Gabel Eissens, M. Gillitzer, D. Lippner, F. Disilvio, C. Mueller, P. Wantuch, G. Chaffee, M. Famiglietti, D. Zgoba, A. Bailey, Y. Bah, S. Engebretson, D. Graupner, E. Lackner, V. Larosa, T. Medeiros, M. Olson, A. Phillips, H. Pyles, A. Richard, S. Schoeller, B. Touzeau, L. Williams, M.K. Sixt, F. Peterson, Biochemistry 54 (2015) 4163–4166.
2015 | Journal Article | IST-REx-ID: 1623 |

Single-cell screening of photosynthetic growth and lactate production by cyanobacteria
P. Hammar, A. Angermayr, S. Sjostrom, J. Van Der Meer, K. Hellingwerf, E. Hudson, H. Joensson, Biotechnology for Biofuels 8 (2015).
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P. Hammar, A. Angermayr, S. Sjostrom, J. Van Der Meer, K. Hellingwerf, E. Hudson, H. Joensson, Biotechnology for Biofuels 8 (2015).
2015 | Journal Article | IST-REx-ID: 1624 |

Cellular cooperation with shift updating and repulsion
A. Pavlogiannis, K. Chatterjee, B. Adlam, M. Nowak, Scientific Reports 5 (2015).
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A. Pavlogiannis, K. Chatterjee, B. Adlam, M. Nowak, Scientific Reports 5 (2015).
2015 | Conference Paper | IST-REx-ID: 1625
Detailed spatio-temporal reconstruction of eyelids
A. Bermano, T. Beeler, Y. Kozlov, D. Bradley, B. Bickel, M. Gross, in:, ACM, 2015.
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A. Bermano, T. Beeler, Y. Kozlov, D. Bradley, B. Bickel, M. Gross, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1626
OmniAD: Data-driven omni-directional aerodynamics
T. Martin, N. Umetani, B. Bickel, in:, ACM, 2015.
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T. Martin, N. Umetani, B. Bickel, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1627
Design and fabrication of flexible rod meshes
J. Pérez, B. Thomaszewski, S. Coros, B. Bickel, J. Canabal, R. Sumner, M. Otaduy, in:, ACM, 2015.
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J. Pérez, B. Thomaszewski, S. Coros, B. Bickel, J. Canabal, R. Sumner, M. Otaduy, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1628 |

Microstructures to control elasticity in 3D printing
C. Schumacher, B. Bickel, J. Rys, S. Marschner, C. Daraio, M. Gross, in:, ACM, 2015.
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C. Schumacher, B. Bickel, J. Rys, S. Marschner, C. Daraio, M. Gross, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1630 |

Learning shape placements by example
P. Guerrero, S. Jeschke, M. Wimmer, P. Wonka, in:, ACM, 2015.
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P. Guerrero, S. Jeschke, M. Wimmer, P. Wonka, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1632 |

A stream function solver for liquid simulations
R. Ando, N. Thuerey, C.J. Wojtan, in:, ACM, 2015.
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R. Ando, N. Thuerey, C.J. Wojtan, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1633 |

High-resolution brittle fracture simulation with boundary elements
D. Hahn, C.J. Wojtan, in:, ACM, 2015.
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D. Hahn, C.J. Wojtan, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1634 |

Double bubbles sans toil and trouble: discrete circulation-preserving vortex sheets for soap films and foams
F. Da, C. Batty, C.J. Wojtan, E. Grinspun, in:, ACM, 2015.
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F. Da, C. Batty, C.J. Wojtan, E. Grinspun, in:, ACM, 2015.
2015 | Journal Article | IST-REx-ID: 1635 |

Discrete Ricci curvature bounds for Bernoulli-Laplace and random transposition models
M. Erbar, J. Maas, P. Tetali, Annales de La Faculté Des Sciences de Toulouse 24 (2015) 781–800.
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M. Erbar, J. Maas, P. Tetali, Annales de La Faculté Des Sciences de Toulouse 24 (2015) 781–800.
2015 | Conference Paper | IST-REx-ID: 1636 |

Effectiveness of structural restrictions for hybrid CSPs
V. Kolmogorov, M. Rolinek, R. Takhanov, 9472 (2015) 566–577.
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V. Kolmogorov, M. Rolinek, R. Takhanov, 9472 (2015) 566–577.
2015 | Conference Paper | IST-REx-ID: 1637 |

The complexity of general-valued CSPs
V. Kolmogorov, A. Krokhin, M. Rolinek, in:, IEEE, 2015, pp. 1246–1258.
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V. Kolmogorov, A. Krokhin, M. Rolinek, in:, IEEE, 2015, pp. 1246–1258.
2015 | Journal Article | IST-REx-ID: 1638
A giant molecular proton pump: structure and mechanism of respiratory complex I
L.A. Sazanov, Nature Reviews Molecular Cell Biology 16 (2015) 375–388.
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L.A. Sazanov, Nature Reviews Molecular Cell Biology 16 (2015) 375–388.
2015 | Journal Article | IST-REx-ID: 1639 |

A generalized model for optimal transport of images including dissipation and density modulation
J. Maas, M. Rumpf, C. Schönlieb, S. Simon, ESAIM: Mathematical Modelling and Numerical Analysis 49 (2015) 1745–1769.
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J. Maas, M. Rumpf, C. Schönlieb, S. Simon, ESAIM: Mathematical Modelling and Numerical Analysis 49 (2015) 1745–1769.
2015 | Journal Article | IST-REx-ID: 1640 |

Cytokinin response factors regulate PIN-FORMED auxin transporters
M. Šimášková, J. O’Brien, M. Khan-Djamei, G. Van Noorden, K. Ötvös, A. Vieten, I. De Clercq, J. Van Haperen, C. Cuesta, K. Hoyerová, S. Vanneste, P. Marhavý, K.T. Wabnik, F. Van Breusegem, M. Nowack, A. Murphy, J. Friml, D. Weijers, T. Beeckman, E. Benková, Nature Communications 6 (2015).
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M. Šimášková, J. O’Brien, M. Khan-Djamei, G. Van Noorden, K. Ötvös, A. Vieten, I. De Clercq, J. Van Haperen, C. Cuesta, K. Hoyerová, S. Vanneste, P. Marhavý, K.T. Wabnik, F. Van Breusegem, M. Nowack, A. Murphy, J. Friml, D. Weijers, T. Beeckman, E. Benková, Nature Communications 6 (2015).
2015 | Journal Article | IST-REx-ID: 1642 |

Clustered planarity testing revisited
R. Fulek, J. Kynčl, I. Malinovič, D. Pálvölgyi, Electronic Journal of Combinatorics 22 (2015).
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R. Fulek, J. Kynčl, I. Malinovič, D. Pálvölgyi, Electronic Journal of Combinatorics 22 (2015).
2015 | Conference Paper | IST-REx-ID: 1644 |

Query-complexity amplification for random oracles
G. Demay, P. Gazi, U. Maurer, B. Tackmann, in:, Springer, 2015, pp. 159–180.
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G. Demay, P. Gazi, U. Maurer, B. Tackmann, in:, Springer, 2015, pp. 159–180.
2015 | Conference Paper | IST-REx-ID: 1645
Secret-key cryptography from ideal primitives: A systematic verview
P. Gazi, S. Tessaro, in:, 2015 IEEE Information Theory Workshop, IEEE, 2015.
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P. Gazi, S. Tessaro, in:, 2015 IEEE Information Theory Workshop, IEEE, 2015.
2015 | Conference Paper | IST-REx-ID: 1646 |

Key-homomorphic constrained pseudorandom functions
A. Banerjee, G. Fuchsbauer, C. Peikert, K.Z. Pietrzak, S. Stevens, 9015 (2015) 31–60.
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A. Banerjee, G. Fuchsbauer, C. Peikert, K.Z. Pietrzak, S. Stevens, 9015 (2015) 31–60.
2015 | Conference Paper | IST-REx-ID: 1647 |

Practical round-optimal blind signatures in the standard model
G. Fuchsbauer, C. Hanser, D. Slamanig, in:, Springer, 2015, pp. 233–253.
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G. Fuchsbauer, C. Hanser, D. Slamanig, in:, Springer, 2015, pp. 233–253.
2015 | Conference Paper | IST-REx-ID: 1648 |

A quasipolynomial reduction for generalized selective decryption on trees
G. Fuchsbauer, Z. Jafargholi, K.Z. Pietrzak, in:, Springer, 2015, pp. 601–620.
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G. Fuchsbauer, Z. Jafargholi, K.Z. Pietrzak, in:, Springer, 2015, pp. 601–620.
2015 | Conference Paper | IST-REx-ID: 1649 |

Efficient zero-knowledge proofs for commitments from learning with errors over rings
F. Benhamouda, S. Krenn, V. Lyubashevsky, K.Z. Pietrzak, 9326 (2015) 305–325.
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F. Benhamouda, S. Krenn, V. Lyubashevsky, K.Z. Pietrzak, 9326 (2015) 305–325.
2015 | Conference Paper | IST-REx-ID: 1650 |

Condensed unpredictability
M. Skórski, A. Golovnev, K.Z. Pietrzak, in:, Springer, 2015, pp. 1046–1057.
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M. Skórski, A. Golovnev, K.Z. Pietrzak, in:, Springer, 2015, pp. 1046–1057.
2015 | Conference Paper | IST-REx-ID: 1651
Anonymous transferable e-cash
F. Baldimtsi, M. Chase, G. Fuchsbauer, M. Kohlweiss, in:, Springer, 2015, pp. 101–124.
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F. Baldimtsi, M. Chase, G. Fuchsbauer, M. Kohlweiss, in:, Springer, 2015, pp. 101–124.
2015 | Conference Paper | IST-REx-ID: 1652 |

High parallel complexity graphs and memory-hard functions
J.F. Alwen, V. Serbinenko, in:, Proceedings of the 47th Annual ACM Symposium on Theory of Computing, ACM, 2015, pp. 595–603.
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J.F. Alwen, V. Serbinenko, in:, Proceedings of the 47th Annual ACM Symposium on Theory of Computing, ACM, 2015, pp. 595–603.
2015 | Conference Paper | IST-REx-ID: 1654 |

Generic security of NMAC and HMAC with input whitening
P. Gazi, K.Z. Pietrzak, S. Tessaro, 9453 (2015) 85–109.
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P. Gazi, K.Z. Pietrzak, S. Tessaro, 9453 (2015) 85–109.
2015 | Journal Article | IST-REx-ID: 1655 |

Quantifying emergent behavior of autonomous robots
G.S. Martius, E. Olbrich, Entropy 17 (2015) 7266–7297.
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G.S. Martius, E. Olbrich, Entropy 17 (2015) 7266–7297.
2015 | Conference Paper | IST-REx-ID: 1656
Nested weighted automata
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Proceedings - Symposium on Logic in Computer Science, IEEE, 2015.
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| arXiv
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Proceedings - Symposium on Logic in Computer Science, IEEE, 2015.
2015 | Conference Paper | IST-REx-ID: 1657
Unifying two views on multiple mean-payoff objectives in Markov decision processes
K. Chatterjee, Z. Komárková, J. Kretinsky, (2015) 244–256.
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K. Chatterjee, Z. Komárková, J. Kretinsky, (2015) 244–256.
2015 | Conference Paper | IST-REx-ID: 1658
Adaptive moment closure for parameter inference of biochemical reaction networks
S. Bogomolov, T.A. Henzinger, A. Podelski, J. Ruess, C. Schilling, 9308 (2015) 77–89.
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S. Bogomolov, T.A. Henzinger, A. Podelski, J. Ruess, C. Schilling, 9308 (2015) 77–89.
2015 | Conference Paper | IST-REx-ID: 1659 |

The target discounted-sum problem
U. Boker, T.A. Henzinger, J. Otop, in:, LICS, IEEE, 2015, pp. 750–761.
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U. Boker, T.A. Henzinger, J. Otop, in:, LICS, IEEE, 2015, pp. 750–761.
2015 | Conference Paper | IST-REx-ID: 1660 |

Long-run average behaviour of probabilistic vector addition systems
T. Brázdil, S. Kiefer, A. Kučera, P. Novotný, in:, IEEE, 2015, pp. 44–55.
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T. Brázdil, S. Kiefer, A. Kučera, P. Novotný, in:, IEEE, 2015, pp. 44–55.
2015 | Conference Paper | IST-REx-ID: 1661 |

Improved algorithms for one-pair and k-pair Streett objectives
K. Chatterjee, M. Henzinger, V. Loitzenbauer, in:, Proceedings - Symposium on Logic in Computer Science, IEEE, 2015.
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K. Chatterjee, M. Henzinger, V. Loitzenbauer, in:, Proceedings - Symposium on Logic in Computer Science, IEEE, 2015.
2015 | Journal Article | IST-REx-ID: 1663
Complex regulation of CREB-binding protein by homeodomain-interacting protein kinase 2
K. Kovács, M. Steinmann, O. Halfon, P. Magistretti, J. Cardinaux, Cellular Signalling 27 (2015) 2252–2260.
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K. Kovács, M. Steinmann, O. Halfon, P. Magistretti, J. Cardinaux, Cellular Signalling 27 (2015) 2252–2260.
2015 | Journal Article | IST-REx-ID: 1664 |

The rise of fully turbulent flow
D. Barkley, B. Song, M. Vasudevan, G.M. Lemoult, M. Avila, B. Hof, Nature 526 (2015) 550–553.
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D. Barkley, B. Song, M. Vasudevan, G.M. Lemoult, M. Avila, B. Hof, Nature 526 (2015) 550–553.
2015 | Journal Article | IST-REx-ID: 1665 |

Mutations driving CLL and their evolution in progression and relapse
D. Landau, E. Tausch, A. Taylor Weiner, C. Stewart, J. Reiter, J. Bahlo, S. Kluth, I. Božić, M. Lawrence, S. Böttcher, S. Carter, K. Cibulskis, D. Mertens, C. Sougnez, M. Rosenberg, J. Hess, J. Edelmann, S. Kless, M. Kneba, M. Ritgen, A. Fink, K. Fischer, S. Gabriel, E. Lander, M. Nowak, H. Döhner, M. Hallek, D. Neuberg, G. Getz, S. Stilgenbauer, C. Wu, Nature 526 (2015) 525–530.
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| PubMed | Europe PMC
D. Landau, E. Tausch, A. Taylor Weiner, C. Stewart, J. Reiter, J. Bahlo, S. Kluth, I. Božić, M. Lawrence, S. Böttcher, S. Carter, K. Cibulskis, D. Mertens, C. Sougnez, M. Rosenberg, J. Hess, J. Edelmann, S. Kless, M. Kneba, M. Ritgen, A. Fink, K. Fischer, S. Gabriel, E. Lander, M. Nowak, H. Döhner, M. Hallek, D. Neuberg, G. Getz, S. Stilgenbauer, C. Wu, Nature 526 (2015) 525–530.
2015 | Conference Paper | IST-REx-ID: 1667 |

Optimizing performance of continuous-time stochastic systems using timeout synthesis
T. Brázdil, L. Korenčiak, J. Krčál, P. Novotný, V. Řehák, 9259 (2015) 141–159.
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T. Brázdil, L. Korenčiak, J. Krčál, P. Novotný, V. Řehák, 9259 (2015) 141–159.
2015 | Conference Paper | IST-REx-ID: 1668 |

Relaxing full-codebook security: A refined analysis of key-length extension schemes
P. Gazi, J. Lee, Y. Seurin, J. Steinberger, S. Tessaro, 9054 (2015) 319–341.
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P. Gazi, J. Lee, Y. Seurin, J. Steinberger, S. Tessaro, 9054 (2015) 319–341.
2015 | Conference Paper | IST-REx-ID: 1669 |

The chain rule for HILL pseudoentropy, revisited
K.Z. Pietrzak, M. Skórski, 9230 (2015) 81–98.
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K.Z. Pietrzak, M. Skórski, 9230 (2015) 81–98.
2015 | Conference Paper | IST-REx-ID: 1670
PDDL+ planning with hybrid automata: Foundations of translating must behavior
S. Bogomolov, D. Magazzeni, S. Minopoli, M. Wehrle, in:, AAAI Press, 2015, pp. 42–46.
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S. Bogomolov, D. Magazzeni, S. Minopoli, M. Wehrle, in:, AAAI Press, 2015, pp. 42–46.