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3929 Publications


2022 | Journal Article | IST-REx-ID: 10731 | OA
Infection dynamics of COVID-19 virus under lockdown and reopening
J. Svoboda, J. Tkadlec, A. Pavlogiannis, K. Chatterjee, M.A. Nowak, Scientific Reports 12 (2022).
View | Files available | DOI | arXiv
 

2022 | Journal Article | IST-REx-ID: 10733 | OA
Intruders cooperatively interact with a wall into granular matter
M. Espinosa, V.L. Diaz Melian, A. Serrano-Muñoz, E. Altshuler, Granular Matter 24 (2022).
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 10735 | OA
Low-field magnetic anisotropy of Sr2IrO4
M. Nauman, T. Hussain, J. Choi, N. Lee, Y.J. Choi, W. Kang, Y. Jo, Journal of Physics: Condensed Matter 34 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10736 | OA
Predicting bacterial promoter function and evolution from random sequences
M. Lagator, S. Sarikas, M. Steinrueck, D. Toledo-Aparicio, J.P. Bollback, C.C. Guet, G. Tkačik, ELife 11 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10737 | OA
Combining pattern-based CRFs and weighted context-free grammars
R. Takhanov, V. Kolmogorov, Intelligent Data Analysis 26 (2022) 257–272.
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 10754 | OA
Developing a mathematical model of intracellular Calcium dynamics for evaluating combined anticancer effects of afatinib and RP4010 in esophageal cancer
Y. Chang, M. Funk, S. Roy, E.R. Stephenson, S. Choi, H.V. Kojouharov, B. Chen, Z. Pan, International Journal of Molecular Sciences 23 (2022).
View | Files available | DOI
 

2022 | Thesis | IST-REx-ID: 10759 | OA
Analytic and machine learning approaches to composite quantum impurities
W. Rzadkowski, Analytic and Machine Learning Approaches to Composite Quantum Impurities, IST Austria, 2022.
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2022 | Journal Article | IST-REx-ID: 10763 | OA
Mechanisms underlying TARP modulation of the GluA1/2-γ8 AMPA receptor
B. Herguedas, B.K. Kohegyi, J.N. Dohrke, J. Watson, D. Zhang, H. Ho, S.A. Shaikh, R. Lape, J.M. Krieger, I.H. Greger, Nature Communications 13 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10764 | OA
Physiological synaptic activity and recognition memory require astroglial glutamine
G.T. Cheung, D. Bataveljic, J. Visser, N. Kumar, J. Moulard, G. Dallérac, D. Mozheiko, A. Rollenhagen, P. Ezan, C. Mongin, O. Chever, A.P. Bemelmans, J. Lübke, I. Leray, N. Rouach, Nature Communications 13 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10766 | OA
Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion in zebrafish germ-layer progenitor cells
J. Slovakova, M.K. Sikora, F.N. Arslan, S. Caballero Mancebo, G. Krens, W. Kaufmann, J. Merrin, C.-P.J. Heisenberg, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 10767 | OA
Novel patterns of expression and recruitment of new genes on the t-haplotype, a mouse selfish chromosome
R.K. Kelemen, M.N. Elkrewi, A.K. Lindholm, B. Vicoso, Proceedings of the Royal Society B: Biological Sciences 289 (2022) 20211985.
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10768 | OA
Auxin canalization: From speculative models toward molecular players
J. Hajny, S. Tan, J. Friml, Current Opinion in Plant Biology 65 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10769 | OA
Non relativistic quantum field theory: Dynamics and irreversibility
L. Daguerre, G. Torroba, R.A. Medina Ramos, M. Solís, Anales de la Asociacion Fisica Argentina 32 (2022) 93–98.
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2022 | Preprint | IST-REx-ID: 10788 | OA View | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 10797 | OA
Orthogonal polynomial duality of boundary driven particle systems and non-equilibrium correlations
S. Floreani, F. Redig, F. Sau, Annales de l’institut Henri Poincare (B) Probability and Statistics 58 (2022) 220–247.
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 10818 | OA
Microglia control glutamatergic synapses in the adult mouse hippocampus
Basilico B, Ferrucci L, Ratano P, Golia MT, Grimaldi A, Rosito M, Ferretti V, Reverte I, Sanchini C, Marrone MC, Giubettini M, De Turris V, Salerno D, Garofalo S, St‐Pierre M, Carrier M, Renzi M, Pagani F, Modi B, Raspa M, Scavizzi F, Gross CT, Marinelli S, Tremblay M, Caprioli D, Maggi L, Limatola C, Di Angelantonio S, Ragozzino D. 2022. Microglia control glutamatergic synapses in the adult mouse hippocampus. Glia. 70(1), 173–195.
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Book Chapter | IST-REx-ID: 10820
Effects of streaky structures on the instability of supersonic boundary layers
J. Liu, E. Marensi, X. Wu, in:, S. Sherwin, P. Schmid, X. Wu (Eds.), IUTAM Laminar-Turbulent Transition, 1st ed., Springer Nature, Cham, 2022, pp. 587–598.
View | DOI
 

2022 | Preprint | IST-REx-ID: 10821 | OA
Alpha rhythm induces attenuation-amplification dynamics in neural activity cascades
F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
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2022 | Journal Article | IST-REx-ID: 10825 | OA
Cell surface fluctuations regulate early embryonic lineage sorting
A. Yanagida, E. Corujo-Simon, C.K. Revell, P. Sahu, G.G. Stirparo, I.M. Aspalter, A.K. Winkel, R. Peters, H. De Belly, D.A.D. Cassani, S. Achouri, R. Blumenfeld, K. Franze, E.B. Hannezo, E.K. Paluch, J. Nichols, K.J. Chalut, Cell 185 (2022) 777–793.e20.
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10826 | OA View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10827 | OA
High-pressure phase behaviors of titanium dioxide revealed by a Δ-learning potential
J.G. Lee, C.J. Pickard, B. Cheng, The Journal of Chemical Physics 156 (2022).
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Conference Paper | IST-REx-ID: 10828 | OA
The impact of changes in resolution on the persistent homology of images
T. Heiss, S. Tymochko, B. Story, A. Garin, H. Bui, B. Bleile, V. Robins, in:, 2021 IEEE International Conference on Big Data, IEEE, 2022, pp. 3824–3834.
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 10829 | OA
Field-effect transistor with a plasmonic fiber optic gate electrode as a multivariable biosensor device
R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, ACS Sensors 7 (2022) 504–512.
View | Files available | DOI
 

2022 | Research Data Reference | IST-REx-ID: 10833
Field-effect transistor with a plasmonic fiber optic gate electrode as a multivariable biosensor device
R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, (2022).
View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 10845 | OA
Impurity with a resonance in the vicinity of the Fermi energy
M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
View | Files available | DOI | arXiv
 

2022 | Journal Article | IST-REx-ID: 10863 View | DOI | arXiv
 

2022 | Journal Article | IST-REx-ID: 10888 | OA
Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling
Q. Lu, Y. Zhang, J. Hellner, C. Giannini, X. Xu, J. Pauwels, Q. Ma, W. Dejonghe, H. Han, B. Van De Cotte, F. Impens, K. Gevaert, I. De Smet, J. Friml, D.M. Molina, E. Russinova, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10889 | OA View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 10890 | OA
The number and distinct clustering patterns of voltage-gated Calcium channels in nerve terminals
K. Eguchi, J.-C. Montanaro-Punzengruber, E. Le Monnier, R. Shigemoto, Frontiers in Neuroanatomy 16 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Conference Paper | IST-REx-ID: 10891
Quantitative monitoring of software
T.A. Henzinger, in:, R. Bloem (Ed.), Software Verification, Springer Nature, 2022, pp. 3–6.
View | DOI
 

2022 | Journal Article | IST-REx-ID: 10920 | OA
Dynamics of hole singlet-triplet qubits with large g-factor differences
D. Jirovec, P.M. Mutter, A.C. Hofmann, A. Crippa, M. Rychetsky, D.L. Craig, J. Kukucka, F. Martins, A. Ballabio, N. Ares, D. Chrastina, G. Isella, G. Burkard, G. Katsaros, Physical Review Letters 128 (2022).
View | Files available | DOI | arXiv
 

2022 | Journal Article | IST-REx-ID: 10924 | OA
Quantum-enabled operation of a microwave-optical interface
R. Sahu, W.J. Hease, A.R. Rueda Sanchez, G.M. Arnold, L. Qiu, J.M. Fink, Nature Communications 13 (2022).
View | Files available | DOI | arXiv
 

2022 | Journal Article | IST-REx-ID: 10927 | OA
PaReBrick: PArallel REarrangements and BReaks identification toolkit
A. Zabelkin, Y. Yakovleva, O. Bochkareva, N. Alexeev, Bioinformatics 38 (2022) 357–363.
View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 10939 | OA
Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 10940 | OA
Magnetic field resilience of three-dimensional transmons with thin-film Al/AlOx/Al Josephson junctions approaching 1 T
J. Krause, C. Dickel, E. Vaal, M. Vielmetter, J. Feng, R. Bounds, G. Catelani, J.M. Fink, Y. Ando, Physical Review Applied 17 (2022).
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 10945 | OA
pH-dependent coloring of combination effect pigments with anthocyanins from Brassica oleracea var. capitata F. rubra
M.O. Çoruh, G. Gündüz, Ü. Çolak, B. Maviş, Colorants 1 (2022) 149–164.
View | Files available | DOI
 

2022 | Thesis | IST-REx-ID: 11128 | OA
Genetic basis of flower colour as a model for adaptive evolution
L. Matejovicova, Genetic Basis of Flower Colour as a Model for Adaptive Evolution, ISTA, 2022.
View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 11135 | OA
On the operator norm of a Hermitian random matrix with correlated entries
J. Reker, Random Matrices: Theory and Applications (2022).
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 11142
Enhanced thermoelectric performance in SnTe due to the energy filtering effect introduced by Bi2O3
T. Hong, C. Guo, D. Wang, B. Qin, C. Chang, X. Gao, L.D. Zhao, Materials Today Energy 25 (2022).
View | DOI
 

2022 | Journal Article | IST-REx-ID: 11143 | OA
Developmentally regulated impairment of parvalbumin interneuron synaptic transmission in an experimental model of Dravet syndrome
K. Kaneko, C. Currin, K.M. Goff, E.R. Wengert, A. Somarowthu, T.P. Vogels, E.M. Goldberg, Cell Reports 38 (2022).
View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 11144
High thermoelectric performance realized through manipulating layered phonon-electron decoupling
L. Su, D. Wang, S. Wang, B. Qin, Y. Wang, Y. Qin, Y. Jin, C. Chang, L.D. Zhao, Science 375 (2022) 1385–1389.
View | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 11160 | OA
CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories
C.E. Villa, C. Cheroni, C. Dotter, A. López-Tóbon, B. Oliveira, R. Sacco, A.Ç. Yahya, J. Morandell, M. Gabriele, M. Tavakoli, J. Lyudchik, C.M. Sommer, M. Gabitto, J.G. Danzl, G. Testa, G. Novarino, Cell Reports 39 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Conference Paper | IST-REx-ID: 11180 | OA
Multi-queues can be state-of-the-art priority schedulers
A. Postnikova, N. Koval, G. Nadiradze, D.-A. Alistarh, in:, Proceedings of the 27th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, Association for Computing Machinery, 2022, pp. 353–367.
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 11182 | OA
Quantifying the probing and selection of microenvironmental pores by motile immune cells
J. Kroll, M.J.A. Ruiz-Fernandez, M.B. Braun, J. Merrin, J. Renkawitz, Current Protocols 2 (2022).
View | Files available | DOI | PubMed | Europe PMC
 

2022 | Conference Paper | IST-REx-ID: 11183 | OA
Beyond distributed subgraph detection: Induced subgraphs, multicolored problems and graph parameters
A. Nikabadi, J. Korhonen, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
View | Files available | DOI
 

2022 | Conference Paper | IST-REx-ID: 11184 | OA
Fast graphical population protocols
D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
View | Files available | DOI | arXiv
 

2022 | Conference Paper | IST-REx-ID: 11185 | OA
Approximating the bundled crossing number
A.M. Arroyo Guevara, S. Felsner, in:, WALCOM 2022: Algorithms and Computation, Springer Nature, 2022, pp. 383–395.
View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 11186 | OA
Large deviations in random latin squares
M.A. Kwan, A. Sah, M. Sawhney, Bulletin of the London Mathematical Society (2022).
View | DOI | Download Published Version (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 11187 | OA
Unlocking capacities of genomics for the COVID-19 response and future pandemics
Knyazev S, Chhugani K, Sarwal V, Ayyala R, Singh H, Karthikeyan S, Deshpande D, Baykal PI, Comarova Z, Lu A, Porozov Y, Vasylyeva TI, Wertheim JO, Tierney BT, Chiu CY, Sun R, Wu A, Abedalthagafi MS, Pak VM, Nagaraj SH, Smith AL, Skums P, Pasaniuc B, Komissarov A, Mason CE, Bortz E, Lemey P, Kondrashov F, Beerenwinkel N, Lam TTY, Wu NC, Zelikovsky A, Knight R, Crandall KA, Mangul S. 2022. Unlocking capacities of genomics for the COVID-19 response and future pandemics. Nature Methods. 19(4), 374–380.
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2022 | Thesis | IST-REx-ID: 11193
Transcriptional regulation by Dfos and BMP-signaling support tissue invasion of Drosophila immune cells
S. Wachner, Transcriptional Regulation by Dfos and BMP-Signaling Support Tissue Invasion of Drosophila Immune Cells, ISTA, 2022.
View | Files available | DOI
 

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