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4941 Publications


2021 | Journal Article | IST-REx-ID: 15262 | OA
Dynamics of hunchback translation in real-time and at single-mRNA resolution in the Drosophila embryo
D.J. Vinter, C. Hoppe, T. Minchington, C. Sutcliffe, H.L. Ashe, Development 148 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15260 | OA [Submitted Version] View | DOI | Download Submitted Version (ext.)
 

2021 | Journal Article | IST-REx-ID: 15259 | OA
On words of non-Hermitian random matrices
G. Dubach, Y. Peled, The Annals of Probability 49 (2021) 1886–1916.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 15261
Uniqueness of form extensions and domination of semigroups
D. Lenz, M. Schmidt, M. Wirth, Journal of Functional Analysis 280 (2021).
View | DOI
 

2021 | Journal Article | IST-REx-ID: 15277 | OA
Targeting alternative splicing by RNAi: From the differential impact on splice variants to triggering artificial pre-mRNA splicing
A. Fuchs, S. Riegler, Z. Ayatollahi, N. Cavallari, L.E. Giono, B.A. Nimeth, K.V. Mutanwad, A. Schweighofer, D. Lucyshyn, A. Barta, E. Petrillo, M. Kalyna, Nucleic Acids Research 49 (2021) 1133–1151.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15278 | OA
Antibiotics treatment modulates microglia–synapses interaction
F. Cordella, C. Sanchini, M. Rosito, L. Ferrucci, N. Pediconi, B. Cortese, F. Guerrieri, G.R. Pascucci, F. Antonangeli, G. Peruzzi, M. Giubettini, B. Basilico, F. Pagani, A. Grimaldi, G. D’Alessandro, C. Limatola, D. Ragozzino, S. Di Angelantonio, Cells 10 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15285 | OA
The history and challenges of SCP-ECG: The standard communication protocol for computer-assisted electrocardiography
P. Rubel, J. Fayn, P.W. Macfarlane, D. Pani, A. Schlögl, A. Värri, Hearts 2 (2021) 384–409.
[Published Version] View | Files available | DOI
 

2021 | Conference Paper | IST-REx-ID: 9644 | OA
Proving non-termination by program reversal
K. Chatterjee, E.K. Goharshady, P. Novotný, D. Zikelic, in:, Proceedings of the 42nd ACM SIGPLAN International Conference on Programming Language Design and Implementation, Association for Computing Machinery, 2021, pp. 1033–1048.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2021 | Journal Article | IST-REx-ID: 15279 | OA
Motivic Euler products in motivic statistics
M. Bilu, S. Howe, Algebra & Number Theory 15 (2021) 2195–2259.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 15283
Peaking into the plant cell wall using cryo-FIB milling and electron cryo-tomography
W. Nicolas, F. Fäßler, E. Meyerowitz, G. Jensen, Microscopy and Microanalysis 27 (2021) 3024–3026.
View | DOI
 

2021 | Research Data Reference | IST-REx-ID: 15284 | OA
RevTerm
K. Chatterjee, A.K. Goharshady, P. Novotný, D. Zikelic, (2021).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2021 | Journal Article | IST-REx-ID: 15276 | OA
The Pleiades are a cluster of fungal effectors that inhibit host defenses
F. Navarrete, N. Grujic, A. Stirnberg, I. Saado, D. Aleksza, M.C. Gallei, H. Adi, A. Alcântara, M. Khan, J. Bindics, M. Trujillo, A. Djamei, PLOS Pathogens 17 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15273 | OA [Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15274 | OA
Cysteine mutants of the major facilitator superfamily-type transporter CcoA provide insight into copper import
B. Khalfaoui-Hassani, P.I. Trasnea, S. Steimle, H.-G. Koch, F. Daldal, MBio 12 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15275 | OA
Bounded VC-dimension implies the Schur-Erdős conjecture
J. Fox, J. Pach, A. Suk, Combinatorica 41 (2021) 803–813.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 15272 | OA
The CATP-8/P5A-type ATPase functions in multiple pathways during neuronal patterning
L.T.H. Tang, M. Trivedi, J. Freund, C.J. Salazar, M. Rahman, N. Ramirez, G. Lee, Y. Wang, B.D. Grant, H.E. Bülow, PLOS Genetics 17 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15269 | OA
Aspects of quantum information in finite density field theory
L. Daguerre, R.A. Medina Ramos, M. Solís, G. Torroba, Journal of High Energy Physics 2021 (2021).
[Published Version] View | Files available | DOI | arXiv
 

2021 | Journal Article | IST-REx-ID: 15271
Simple, deterministic, constant-round coloring in congested clique and MPC
A. Czumaj, P. Davies, M. Parter, SIAM Journal on Computing 50 (2021) 1603–1626.
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2021 | Journal Article | IST-REx-ID: 15270 | OA
Active efflux leads to heterogeneous dissipation of proton motive force by protonophores in bacteria
D. Le, E. Krasnopeeva, F. Sinjab, T. Pilizota, M. Kim, MBio 12 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9350 | OA
Holding it together: when cadherin meets cadherin
F.N. Arslan, J. Eckert, T. Schmidt, C.-P.J. Heisenberg, Biophysical Journal 120 (2021) 4182–4192.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9438 | OA
Subcellular patch-clamp techniques for single-bouton stimulation and simultaneous pre- and postsynaptic recording at cortical synapses
D.H. Vandael, Y. Okamoto, C. Borges Merjane, V.M. Vargas Barroso, B. Suter, P.M. Jonas, Nature Protocols 16 (2021) 2947–2967.
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Thesis | IST-REx-ID: 9992 | OA
Wound healing in the Arabidopsis root meristem
L. Hörmayer, Wound Healing in the Arabidopsis Root Meristem, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Journal Article | IST-REx-ID: 10816 | OA
How connectivity rules and synaptic properties shape the efficacy of pattern separation in the entorhinal cortex–dentate gyrus–CA3 network
J. Guzmán, A. Schlögl, C. Espinoza Martinez, X. Zhang, B. Suter, P.M. Jonas, Nature Computational Science 1 (2021) 830–842.
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)
 

2021 | Scientific Software | IST-REx-ID: 10110 | OA View | Files available | DOI
 

2021 | Preprint | IST-REx-ID: 10077 | OA
The structure of hippocampal CA1 interactions optimizes spatial coding across experience
M. Nardin, J.L. Csicsvari, G. Tkačik, C. Savin, BioRxiv (n.d.).
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 

2021 | Journal Article | IST-REx-ID: 9250 | OA
Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation
Y.K. Petit, E. Mourad, C. Prehal, C. Leypold, A. Windischbacher, D. Mijailovic, C. Slugovc, S.M. Borisov, E. Zojer, S. Brutti, O. Fontaine, S.A. Freunberger, Nature Chemistry 13 (2021) 465–471.
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Thesis | IST-REx-ID: 9623 | OA
Fertilization-induced deformations are controlled by the actin cortex and a mitochondria-rich subcortical layer in ascidian oocytes
S. Caballero Mancebo, Fertilization-Induced Deformations Are Controlled by the Actin Cortex and a Mitochondria-Rich Subcortical Layer in Ascidian Oocytes, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Journal Article | IST-REx-ID: 9006 | OA
Cytoplasm's got moves
S. Shamipour, S. Caballero Mancebo, C.-P.J. Heisenberg, Developmental Cell 56 (2021) P213-226.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9429 | OA
Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development
J. Morandell, L.A. Schwarz, B. Basilico, S. Tasciyan, G.A. Dimchev, A. Nicolas, C.M. Sommer, C. Kreuzinger, C. Dotter, L. Knaus, Z. Dobler, E. Cacci, F.K. Schur, J.G. Danzl, G. Novarino, Nature Communications 12 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Thesis | IST-REx-ID: 10058 | OA
Singlet-Triplet qubits and spin-orbit interaction in 2-dimensional Ge hole gases
D. Jirovec, Singlet-Triplet Qubits and Spin-Orbit Interaction in 2-Dimensional Ge Hole Gases, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Journal Article | IST-REx-ID: 8909 | OA
A singlet triplet hole spin qubit in planar Ge
D. Jirovec, A.C. Hofmann, A. Ballabio, P.M. Mutter, G. Tavani, M. Botifoll, A. Crippa, J. Kukucka, O. Sagi, F. Martins, J. Saez Mollejo, I. Prieto Gonzalez, M. Borovkov, J. Arbiol, D. Chrastina, G. Isella, G. Katsaros, Nature Materials 20 (2021) 1106–1112.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2021 | Thesis | IST-REx-ID: 9397 | OA
Coordinated spatiotemporal reorganization of interstitial fluid is required for axial mesendoderm migration in zebrafish gastrulation
K. Huljev, Coordinated Spatiotemporal Reorganization of Interstitial Fluid Is Required for Axial Mesendoderm Migration in Zebrafish Gastrulation, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Preprint | IST-REx-ID: 10066 | OA
Cross-architecture tuning of silicon and SiGe-based quantum devices using machine learning
Severin B, Lennon DT, Camenzind LC, Vigneau F, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, Kruijf M de, Carballido MJ, Svab S, Kuhlmann AV, Braakman FR, Geyer S, Froning FNM, Moon H, Osborne MA, Sejdinovic D, Katsaros G, Zumbühl DM, Briggs GAD, Ares N. Cross-architecture tuning of silicon and SiGe-based quantum devices using machine learning. arXiv, 2107.12975.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 9437 | OA
GABAB receptor auxiliary subunits modulate Cav2.3-mediated release from medial habenula terminals
P. Bhandari, D.H. Vandael, D. Fernández-Fernández, T. Fritzius, D. Kleindienst, H.C. Önal, J.-C. Montanaro-Punzengruber, M. Gassmann, P.M. Jonas, A. Kulik, B. Bettler, R. Shigemoto, P. Koppensteiner, ELife 10 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Thesis | IST-REx-ID: 9562 | OA
2B or not 2B: Hippocampal asymmetries mediated by NMDA receptor subunit GluN2B C-terminus and high-throughput image analysis by Deep-Learning
D. Kleindienst, 2B or Not 2B: Hippocampal Asymmetries Mediated by NMDA Receptor Subunit GluN2B C-Terminus and High-Throughput Image Analysis by Deep-Learning, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Book Chapter | IST-REx-ID: 9756
High-Resolution localization and quantitation of membrane proteins by SDS-digested freeze-fracture replica labeling (SDS-FRL)
W. Kaufmann, D. Kleindienst, H. Harada, R. Shigemoto, in:, Receptor and Ion Channel Detection in the Brain, Humana, New York, 2021, pp. 267–283.
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2021 | Thesis | IST-REx-ID: 8934 | OA
Parameterized and algebro-geometric advances in static program analysis
A.K. Goharshady, Parameterized and Algebro-Geometric Advances in Static Program Analysis, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Thesis | IST-REx-ID: 10307 | OA
Pathogenic Escherichia coli hijack the host immune response
K. Tomasek, Pathogenic Escherichia Coli Hijack the Host Immune Response, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Preprint | IST-REx-ID: 10316 | OA
Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14
K. Tomasek, A.F. Leithner, I. Glatzová, M.S. Lukesch, C.C. Guet, M.K. Sixt, BioRxiv (n.d.).
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 

2021 | Journal Article | IST-REx-ID: 9010 | OA
Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport
K. Ötvös, M. Marconi, A. Vega, J. O’Brien, A.J. Johnson, R. Abualia, L. Antonielli, J.C. Montesinos López, Y. Zhang, S. Tan, C. Cuesta, C. Artner, E. Bouguyon, A. Gojon, J. Friml, R.A. Gutiérrez, K.T. Wabnik, E. Benková, EMBO Journal 40 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9913 | OA
Nitrate triggered phosphoproteome changes and a PIN2 phosphosite modulating root system architecture
A. Vega, I. Fredes, J. O’Brien, Z. Shen, K. Ötvös, R. Abualia, E. Benková, S.P. Briggs, R.A. Gutiérrez, EMBO Reports 22 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Thesis | IST-REx-ID: 10303 | OA
Role of hormones in nitrate regulated growth
R. Abualia, Role of Hormones in Nitrate Regulated Growth, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Thesis | IST-REx-ID: 9962 | OA
Cell-autonomous gene function and non-cell-autonomous effects in radial projection neuron migration
A.H. Hansen, Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects in Radial Projection Neuron Migration, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Journal Article | IST-REx-ID: 9428 | OA
Quantum many-body scars and weak breaking of ergodicity
M. Serbyn, D.A. Abanin, Z. Papić, Nature Physics 17 (2021) 675–685.
[Preprint] View | Files available | DOI | WoS | arXiv
 

2021 | Journal Article | IST-REx-ID: 8931 | OA
Developmental roles of auxin binding protein 1 in Arabidopsis thaliana
Z. Gelová, M.C. Gallei, M. Pernisová, G. Brunoud, X. Zhang, M. Glanc, L. Li, J. Michalko, Z. Pavlovicova, I. Verstraeten, H. Han, J. Hajny, R. Hauschild, M. Čovanová, M. Zwiewka, L. Hörmayer, M. Fendrych, T. Xu, T. Vernoux, J. Friml, Plant Science 303 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9287 | OA
Systematic analysis of specific and nonspecific auxin effects on endocytosis and trafficking
M. Narasimhan, M.C. Gallei, S. Tan, A.J. Johnson, I. Verstraeten, L. Li, L. Rodriguez Solovey, H. Han, E. Himschoot, R. Wang, S. Vanneste, J. Sánchez-Simarro, F. Aniento, M. Adamowski, J. Friml, Plant Physiology 186 (2021) 1122–1142.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Thesis | IST-REx-ID: 10083 | OA
Rapid cell growth regulation in Arabidopsis
L. Li, Rapid Cell Growth Regulation in Arabidopsis, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

2021 | Journal Article | IST-REx-ID: 10015 | OA
The Arabidopsis root tip (phospho)proteomes at growth-promoting versus growth-repressing conditions reveal novel root growth regulators
N. Nikonorova, E. Murphy, C. Fonseca de Lima, S. Zhu, B. van de Cotte, L. Vu, D. Balcerowicz, L. Li, X. Kong, G. De Rop, T. Beeckman, J. Friml, K. Vissenberg, P. Morris, Z. Ding, I. De Smet, Cells 10 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Preprint | IST-REx-ID: 10095 | OA
Cell surface and intracellular auxin signalling for H+-fluxes in root growth
L. Li, I. Verstraeten, M. Roosjen, K. Takahashi, L. Rodriguez Solovey, J. Merrin, J. Chen, L. Shabala, W. Smet, H. Ren, S. Vanneste, S. Shabala, B. De Rybel, D. Weijers, T. Kinoshita, W.M. Gray, J. Friml, Research Square (n.d.).
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 

2021 | Thesis | IST-REx-ID: 10293 | OA
Evolution of cooperation via (in)direct reciprocity under imperfect information
L. Schmid, Evolution of Cooperation via (in)Direct Reciprocity under Imperfect Information, Institute of Science and Technology Austria, 2021.
[Published Version] View | Files available | DOI
 

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