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2886 Publications


2016 | Journal Article | IST-REx-ID: 1371
Drivers of structural features in gene regulatory networks: From biophysical constraints to biological function
O. Martin, A. Krzywicki, M.P. Zagórski, Physics of Life Reviews 17 (2016) 124–158.
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2016 | Journal Article | IST-REx-ID: 1372 | OA
Cytokinins influence root gravitropism via differential regulation of auxin transporter expression and localization in Arabidopsis
M. Pernisová, T. Prat, P. Grones, D. Haruštiaková, M. Matonohova, L. Spíchal, T. Nodzyński, J. Friml, J. Hejátko, New Phytologist 212 (2016) 497–509.
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2016 | Journal Article | IST-REx-ID: 1373 | OA
Network architectures and operating principles. Reply to comments on "Drivers of structural features in gene regulatory networks: From biophysical constraints to biological function"
O. Martin, M.P. Zagórski, Physics of Life Reviews 17 (2016) 168–171.
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2016 | Journal Article | IST-REx-ID: 1377 | OA
Total variation on a tree
V. Kolmogorov, T. Pock, M. Rolinek, SIAM Journal on Imaging Sciences 9 (2016) 605–636.
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2016 | Conference Paper | IST-REx-ID: 1378 | OA
On expansion and topological overlap
D. Dotterrer, T. Kaufman, U. Wagner, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 2016, p. 35.1-35.10.
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2016 | Conference Paper | IST-REx-ID: 1379 | OA
Finding non-orientable surfaces in 3-manifolds
B. Burton, A.N. de Mesmay, U. Wagner, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 2016, p. 24.1-24.15.
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2016 | Journal Article | IST-REx-ID: 1380 | OA
On the complexity of the orbit problem
V.K. Chonev, J. Ouaknine, J. Worrell, Journal of the ACM 63 (2016).
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2016 | Conference Paper | IST-REx-ID: 1381 | OA
Eliminating higher-multiplicity intersections, II. The deleted product criterion in the r-metastable range
I. Mabillard, U. Wagner, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, 2016, p. 51.1-51.12.
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2016 | Journal Article | IST-REx-ID: 1382
Repeated gains in yellow and anthocyanin pigmentation in flower colour transitions in the Antirrhineae
T. Ellis, D. Field, Annals of Botany 117 (2016) 1133–1140.
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2016 | Conference Paper | IST-REx-ID: 1386 | OA
Termination analysis of probabilistic programs through Positivstellensatz's
K. Chatterjee, H. Fu, A. Goharshady, in:, Springer, 2016, pp. 3–22.
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2016 | Conference Paper | IST-REx-ID: 1389 | OA
On recurrent reachability for continuous linear dynamical systems
V.K. Chonev, J. Ouaknine, J. Worrell, in:, LICS ’16, IEEE, 2016, pp. 515–524.
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2016 | Conference Paper | IST-REx-ID: 1390
QLOSE: Program repair with quantitative objectives
L. D’Antoni, R. Samanta, R. Singh, in:, Springer, 2016, pp. 383–401.
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2016 | Conference Paper | IST-REx-ID: 1391 | OA
Array folds logic
P. Daca, T.A. Henzinger, A. Kupriyanov, in:, Springer, 2016, pp. 230–248.
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2016 | Journal Article | IST-REx-ID: 1394 | OA
Growth against entropy in bacterial metabolism: the phenotypic trade-off behind empirical growth rate distributions in E. coli
D. De Martino, F. Capuani, A. De Martino, Physical Biology 13 (2016).
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2016 | Thesis | IST-REx-ID: 1396
Synaptic plasticity rules at CA3-CA3 recurrent synapses in hippocampus
R.K. Mishra, Synaptic Plasticity Rules at CA3-CA3 Recurrent Synapses in Hippocampus, IST Austria, 2016.
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2016 | Thesis | IST-REx-ID: 1397
Algorithms for partially observable markov decision processes
M. Chmelik, Algorithms for Partially Observable Markov Decision Processes, IST Austria, 2016.
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2016 | Thesis | IST-REx-ID: 1398 | OA
The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone
T. Ellis, The Role of Pollinator-Mediated Selection in the Maintenance of a Flower Color Polymorphism in an Antirrhinum Majus Hybrid Zone, IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1408 | OA
On computability and triviality of well groups
P. Franek, M. Krcál, Discrete & Computational Geometry 56 (2016) 126–164.
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2016 | Journal Article | IST-REx-ID: 1409 | OA
Genomics of hybridization and its evolutionary consequences
R. Abbott, N.H. Barton, J. Good, Molecular Ecology 25 (2016) 2325–2332.
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2016 | Journal Article | IST-REx-ID: 1410 | OA
Phosphatidylinositol 4-phosphate 5-kinases 1 and 2 are involved in the regulation of vacuole morphology during Arabidopsis thaliana pollen development
J. Ugalde, C. Rodríguez Furlán, R. De Rycke, L. Norambuena, J. Friml, G. León, R. Tejos, Plant Science 250 (2016) 10–19.
View | Files available | DOI | PubMed | Europe PMC
 

2016 | Journal Article | IST-REx-ID: 1411 | OA
Untangling two systems of noncrossing curves
J. Matoušek, E. Sedgwick, M. Tancer, U. Wagner, Israel Journal of Mathematics 212 (2016) 37–79.
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2016 | Journal Article | IST-REx-ID: 1412 | OA
A practical method for high-resolution embedded liquid surfaces
R. Goldade, C. Batty, C.J. Wojtan, Computer Graphics Forum 35 (2016) 233–242.
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2016 | Journal Article | IST-REx-ID: 1413
Generalized diffusion curves: An improved vector representation for smooth-shaded images
S. Jeschke, Computer Graphics Forum 35 (2016) 71–79.
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2016 | Journal Article | IST-REx-ID: 1414
Modeling and estimation of energy-based hyperelastic objects
E. Miguel Villalba, D. Miraut, M. Otaduy, Computer Graphics Forum 35 (2016) 385–396.
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2016 | Journal Article | IST-REx-ID: 1415 | OA
Narrow band FLIP for liquid simulations
F. Ferstl, R. Ando, C.J. Wojtan, R. Westermann, N. Thuerey, Computer Graphics Forum 35 (2016) 225–232.
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2016 | Journal Article | IST-REx-ID: 1416 | OA
Interaction-driven Lifshitz transition with dipolar fermions in optical lattices
E. Van Loon, M. Katsnelson, L. Chomaz, M. Lemeshko, Physical Review B - Condensed Matter and Materials Physics 93 (2016).
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2016 | Journal Article | IST-REx-ID: 1417 | OA
PIN6 auxin transporter at endoplasmic reticulum and plasma membrane mediates auxin homeostasis and organogenesis in Arabidopsis
S. Simon, P. Skůpa, T. Viaene, M. Zwiewka, R. Tejos, P. Klíma, M. Čarná, J. Rolčík, R. De Rycke, I. Moreno, P. Dobrev, A. Orellana, E. Zažímalová, J. Friml, New Phytologist 211 (2016) 65–74.
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2016 | Journal Article | IST-REx-ID: 1419
Gutzwiller wave function for finite systems: Superconductivity in the Hubbard model
A. Tomski, J. Kaczmarczyk, Journal of Physics: Condensed Matter 28 (2016).
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2016 | Journal Article | IST-REx-ID: 1420 | OA
A general approximation for the dynamics of quantitative traits
K. Bod’ová, G. Tkacik, N.H. Barton, Genetics 202 (2016) 1523–1548.
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2016 | Conference Paper | IST-REx-ID: 1421
Scalable static hybridization methods for analysis of nonlinear systems
S. Bak, S. Bogomolov, T.A. Henzinger, T. Johnson, P. Prakash, in:, Springer, 2016, pp. 155–164.
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2016 | Journal Article | IST-REx-ID: 1422 | OA
Incompatibility of time-dependent Bogoliubov–de-Gennes and Ginzburg–Landau equations
R. Frank, C. Hainzl, B. Schlein, R. Seiringer, Letters in Mathematical Physics 106 (2016) 913–923.
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2016 | Journal Article | IST-REx-ID: 1423 | OA
Comparing reactive and memory-one strategies of direct reciprocity
S. Baek, H. Jeong, C. Hilbe, M. Nowak, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1426 | OA
Coevolutionary interactions between farmers and mafia induce host acceptance of avian brood parasites
M. Chakra, C. Hilbe, A. Traulsen, Royal Society Open Science 3 (2016).
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2016 | Journal Article | IST-REx-ID: 1427 | OA
Epistatic interactions in the arabinose cis-regulatory element
M. Lagator, C. Igler, A. Moreno, C.C. Guet, J.P. Bollback, Molecular Biology and Evolution 33 (2016) 761–769.
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2016 | Conference Paper | IST-REx-ID: 1428 | OA
Superfluidity and BEC in a Model of Interacting Bosons in a Random Potential
M. Könenberg, T. Moser, R. Seiringer, J. Yngvason, in:, Journal of Physics: Conference Series, IOP Publishing Ltd., 2016.
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2016 | Journal Article | IST-REx-ID: 1429 | OA
Free-carrier-induced soliton fission unveiled by in situ measurements in nanophotonic waveguides
C. Husko, M. Wulf, S. Lefrançois, S. Combrié, G. Lehoucq, A. De Rossi, B. Eggleton, L. Kuipers, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1431 | OA
Host plant use drives genetic differentiation in syntopic populations of Maculinea alcon
A. Tartally, A. Kelager, M. Fürst, D. Nash, PeerJ 2016 (2016).
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2016 | Journal Article | IST-REx-ID: 1432 | OA
Symmetric spike timing-dependent plasticity at CA3–CA3 synapses optimizes storage and recall in autoassociative networks
R.K. Mishra, S. Kim, J. Guzmán, P.M. Jonas, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1434 | OA
Local stability of the free additive convolution
Z. Bao, L. Erdös, K. Schnelli, Journal of Functional Analysis 271 (2016) 672–719.
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2016 | Journal Article | IST-REx-ID: 1435 | OA
P2Y receptors in synaptic transmission and plasticity: Therapeutic potential in cognitive dysfunction
J. Guzmán, Z. Gerevich, Neural Plasticity 2016 (2016).
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2016 | Journal Article | IST-REx-ID: 1436 | OA
Kinetic energy estimates for the accuracy of the time-dependent Hartree-Fock approximation with Coulomb interaction
V. Bach, S. Breteaux, S.P. Petrat, P. Pickl, T. Tzaneteas, Journal de Mathématiques Pures et Appliquées 105 (2016) 1–30.
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2016 | Conference Paper | IST-REx-ID: 1437 | OA
Algorithms for algebraic path properties in concurrent systems of constant treewidth components
K. Chatterjee, A. Goharshady, R. Ibsen-Jensen, A. Pavlogiannis, in:, ACM, 2016, pp. 733–747.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2016 | Conference Paper | IST-REx-ID: 1438 | OA
Algorithmic analysis of qualitative and quantitative termination problems for affine probabilistic programs
K. Chatterjee, H. Fu, P. Novotny, R. Hasheminezhad, in:, ACM, 2016, pp. 327–342.
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2016 | Conference Paper | IST-REx-ID: 1439 | OA
PSYNC: A partially synchronous language for fault-tolerant distributed algorithms
C. Dragoi, T.A. Henzinger, D. Zufferey, in:, ACM, 2016, pp. 400–415.
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2016 | Journal Article | IST-REx-ID: 1440
Light at the end of the protein: Crystal structure of a C-terminal light-sensing domain
H.L. Janovjak, Structure 24 (2016) 213–215.
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2016 | Journal Article | IST-REx-ID: 1441 | OA
A phytochrome sensory domain permits receptor activation by red light
E. Gschaider-Reichhart, Á. Inglés Prieto, A.-M. Tichy, C. Mckenzie, H.L. Janovjak, Angewandte Chemie - International Edition 55 (2016) 6339–6342.
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2016 | Journal Article | IST-REx-ID: 1445
Erratum to: On the uncertainty of interdisciplinarity measurements due to incomplete bibliographic data
M. Calatrava Moreno, T. Auzinger, H. Werthner, Scientometrics 107 (2016) 233–234.
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2016 | Journal Article | IST-REx-ID: 1446 | OA
On the uncertainty of interdisciplinarity measurements due to incomplete bibliographic data
M. Calatrava Moreno, T. Auzinger, H. Werthner, Scientometrics 107 (2016) 213–232.
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2016 | Journal Article | IST-REx-ID: 1448 | OA
Entropic Ricci curvature bounds for discrete interacting systems
M. Fathi, J. Maas, The Annals of Applied Probability 26 (2016) 1774–1806.
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2016 | Journal Article | IST-REx-ID: 1475 | OA
Yeast Eps15-like endocytic protein Pan1p regulates the interaction between endocytic vesicles, endosomes and the actin cytoskeleton
J. Toshima, E. Furuya, M. Nagano, C. Kanno, Y. Sakamoto, M. Ebihara, D.E. Siekhaus, J. Toshima, ELife 5 (2016).
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