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3078 Publications
2015 | Conference Paper | IST-REx-ID: 1605 |

S. Bogomolov, C. Schilling, E. Bartocci, G. Batt, H. Kong, and R. Grosu, “Abstraction-based parameter synthesis for multiaffine systems,” presented at the HVC: Haifa Verification Conference, Haifa, Israel, 2015, vol. 9434, pp. 19–35.
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2015 | Conference Paper | IST-REx-ID: 1607 |

K. Chatterjee, R. Ibsen-Jensen, and A. Pavlogiannis, “Faster algorithms for quantitative verification in constant treewidth graphs,” presented at the CAV: Computer Aided Verification, San Francisco, CA, USA, 2015, vol. 9206, pp. 140–157.
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2015 | Conference Paper | IST-REx-ID: 1609 |

K. Chatterjee, L. Doyen, and M. Vardi, “The complexity of synthesis from probabilistic components,” vol. 9135. Springer, pp. 108–120, 2015.
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2015 | Conference Paper | IST-REx-ID: 1610
K. Chatterjee, T. A. Henzinger, R. Ibsen-Jensen, and J. Otop, “Edit distance for pushdown automata,” vol. 9135, no. Part II. Springer, pp. 121–133, 2015.
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2015 | Journal Article | IST-REx-ID: 1611 |

J. Whitfield et al., “Construction of a robust and sensitive arginine biosensor through ancestral protein reconstruction,” Protein Science, vol. 24, no. 9. Wiley, pp. 1412–1422, 2015.
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| PubMed | Europe PMC
2015 | Journal Article | IST-REx-ID: 1614 |

M. Strüber, P. M. Jonas, and M. Bartos, “Strength and duration of perisomatic GABAergic inhibition depend on distance between synaptically connected cells,” PNAS, vol. 112, no. 4. National Academy of Sciences, pp. 1220–1225, 2015.
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| PubMed | Europe PMC
2015 | Journal Article | IST-REx-ID: 1615 |

M. Hammer et al., “Perturbed hippocampal synaptic inhibition and γ-oscillations in a neuroligin-4 knockout mouse model of autism,” Cell Reports, vol. 13, no. 3. Cell Press, pp. 516–523, 2015.
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2015 | Journal Article | IST-REx-ID: 1618 |

C. Veldkamp et al., “Solution structure of CCL19 and identification of overlapping CCR7 and PSGL-1 binding sites,” Biochemistry, vol. 54, no. 27. ACS, pp. 4163–4166, 2015.
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| PubMed | Europe PMC
2015 | Journal Article | IST-REx-ID: 1623 |

P. Hammar et al., “Single-cell screening of photosynthetic growth and lactate production by cyanobacteria,” Biotechnology for Biofuels, vol. 8, no. 1. BioMed Central, 2015.
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2015 | Journal Article | IST-REx-ID: 1624 |

A. Pavlogiannis, K. Chatterjee, B. Adlam, and M. Nowak, “Cellular cooperation with shift updating and repulsion,” Scientific Reports, vol. 5. Nature Publishing Group, 2015.
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2015 | Conference Paper | IST-REx-ID: 1625
A. Bermano, T. Beeler, Y. Kozlov, D. Bradley, B. Bickel, and M. Gross, “Detailed spatio-temporal reconstruction of eyelids,” presented at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques, Los Angeles, CA, United States, 2015, vol. 34, no. 4.
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2015 | Conference Paper | IST-REx-ID: 1628 |

C. Schumacher, B. Bickel, J. Rys, S. Marschner, C. Daraio, and M. Gross, “Microstructures to control elasticity in 3D printing,” presented at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques, Los Angeles, CA, USA, 2015, vol. 34, no. 4.
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2015 | Conference Paper | IST-REx-ID: 1630 |

P. Guerrero, S. Jeschke, M. Wimmer, and P. Wonka, “Learning shape placements by example,” presented at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques, Los Angeles, CA, United States, 2015, vol. 34, no. 4.
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2015 | Conference Paper | IST-REx-ID: 1632 |

R. Ando, N. Thuerey, and C. J. Wojtan, “A stream function solver for liquid simulations,” presented at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques, Los Angeles, CA, USA, 2015, vol. 34, no. 4.
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2015 | Conference Paper | IST-REx-ID: 1633 |

D. Hahn and C. J. Wojtan, “High-resolution brittle fracture simulation with boundary elements,” presented at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques, Los Angeles, CA, United States, 2015, vol. 34, no. 4.
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2015 | Conference Paper | IST-REx-ID: 1634 |

F. Da, C. Batty, C. J. Wojtan, and E. Grinspun, “Double bubbles sans toil and trouble: discrete circulation-preserving vortex sheets for soap films and foams,” presented at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques, Los Angeles, CA, United States, 2015, vol. 34, no. 4.
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2015 | Journal Article | IST-REx-ID: 1635 |

M. Erbar, J. Maas, and P. Tetali, “Discrete Ricci curvature bounds for Bernoulli-Laplace and random transposition models,” Annales de la faculté des sciences de Toulouse, vol. 24, no. 4. Univ. Paul Sabatier, pp. 781–800, 2015.
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2015 | Conference Paper | IST-REx-ID: 1636 |

V. Kolmogorov, M. Rolinek, and R. Takhanov, “Effectiveness of structural restrictions for hybrid CSPs,” vol. 9472. Springer, pp. 566–577, 2015.
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2015 | Conference Paper | IST-REx-ID: 1637 |

V. Kolmogorov, A. Krokhin, and M. Rolinek, “The complexity of general-valued CSPs,” presented at the FOCS: Foundations of Computer Science, Berkeley, CA, United States, 2015, pp. 1246–1258.
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2015 | Journal Article | IST-REx-ID: 1639 |

J. Maas, M. Rumpf, C. Schönlieb, and S. Simon, “A generalized model for optimal transport of images including dissipation and density modulation,” ESAIM: Mathematical Modelling and Numerical Analysis, vol. 49, no. 6. EDP Sciences, pp. 1745–1769, 2015.
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| arXiv
2015 | Journal Article | IST-REx-ID: 1640 |

M. Šimášková et al., “Cytokinin response factors regulate PIN-FORMED auxin transporters,” Nature Communications, vol. 6. Nature Publishing Group, 2015.
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2015 | Journal Article | IST-REx-ID: 1642 |

R. Fulek, J. Kynčl, I. Malinovič, and D. Pálvölgyi, “Clustered planarity testing revisited,” Electronic Journal of Combinatorics, vol. 22, no. 4. Electronic Journal of Combinatorics, 2015.
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2015 | Conference Paper | IST-REx-ID: 1644 |

G. Demay, P. Gazi, U. Maurer, and B. Tackmann, “Query-complexity amplification for random oracles,” presented at the ICITS: International Conference on Information Theoretic Security, Lugano, Switzerland, 2015, vol. 9063, pp. 159–180.
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2015 | Conference Paper | IST-REx-ID: 1646 |

A. Banerjee, G. Fuchsbauer, C. Peikert, K. Z. Pietrzak, and S. Stevens, “Key-homomorphic constrained pseudorandom functions,” vol. 9015. Springer, pp. 31–60, 2015.
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2015 | Conference Paper | IST-REx-ID: 1647 |

G. Fuchsbauer, C. Hanser, and D. Slamanig, “Practical round-optimal blind signatures in the standard model,” presented at the CRYPTO: International Cryptology Conference, Santa Barbara, CA, United States, 2015, vol. 9216, pp. 233–253.
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2015 | Conference Paper | IST-REx-ID: 1648 |

G. Fuchsbauer, Z. Jafargholi, and K. Z. Pietrzak, “A quasipolynomial reduction for generalized selective decryption on trees,” presented at the CRYPTO: International Cryptology Conference, Santa Barbara, CA, USA, 2015, vol. 9215, pp. 601–620.
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2015 | Conference Paper | IST-REx-ID: 1649 |

F. Benhamouda, S. Krenn, V. Lyubashevsky, and K. Z. Pietrzak, “Efficient zero-knowledge proofs for commitments from learning with errors over rings,” vol. 9326. Springer, pp. 305–325, 2015.
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2015 | Conference Paper | IST-REx-ID: 1650 |

M. Skórski, A. Golovnev, and K. Z. Pietrzak, “Condensed unpredictability ,” presented at the ICALP: Automata, Languages and Programming, Kyoto, Japan, 2015, vol. 9134, pp. 1046–1057.
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2015 | Conference Paper | IST-REx-ID: 1652 |

J. F. Alwen and V. Serbinenko, “High parallel complexity graphs and memory-hard functions,” in Proceedings of the 47th annual ACM symposium on Theory of computing, Portland, OR, United States, 2015, pp. 595–603.
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2015 | Conference Paper | IST-REx-ID: 1654 |

P. Gazi, K. Z. Pietrzak, and S. Tessaro, “Generic security of NMAC and HMAC with input whitening,” vol. 9453. Springer, pp. 85–109, 2015.
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2015 | Journal Article | IST-REx-ID: 1655 |

G. S. Martius and E. Olbrich, “Quantifying emergent behavior of autonomous robots,” Entropy, vol. 17, no. 10. Multidisciplinary Digital Publishing Institute, pp. 7266–7297, 2015.
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2015 | Conference Paper | IST-REx-ID: 1656
K. Chatterjee, T. A. Henzinger, and J. Otop, “Nested weighted automata,” in Proceedings - Symposium on Logic in Computer Science, Kyoto, Japan, 2015, vol. 2015–July.
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| arXiv
2015 | Conference Paper | IST-REx-ID: 1657
K. Chatterjee, Z. Komárková, and J. Kretinsky, “Unifying two views on multiple mean-payoff objectives in Markov decision processes.” IEEE, pp. 244–256, 2015.
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2015 | Conference Paper | IST-REx-ID: 1658
S. Bogomolov, T. A. Henzinger, A. Podelski, J. Ruess, and C. Schilling, “Adaptive moment closure for parameter inference of biochemical reaction networks,” vol. 9308. Springer, pp. 77–89, 2015.
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2015 | Conference Paper | IST-REx-ID: 1659 |

U. Boker, T. A. Henzinger, and J. Otop, “The target discounted-sum problem,” in LICS, Kyoto, Japan, 2015, pp. 750–761.
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2015 | Conference Paper | IST-REx-ID: 1660 |

T. Brázdil, S. Kiefer, A. Kučera, and P. Novotný, “Long-run average behaviour of probabilistic vector addition systems,” presented at the LICS: Logic in Computer Science, Kyoto, Japan, 2015, pp. 44–55.
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2015 | Conference Paper | IST-REx-ID: 1661 |

K. Chatterjee, M. Henzinger, and V. Loitzenbauer, “Improved algorithms for one-pair and k-pair Streett objectives,” in Proceedings - Symposium on Logic in Computer Science, Kyoto, Japan, 2015, vol. 2015–July.
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2015 | Journal Article | IST-REx-ID: 1663
K. Kovács, M. Steinmann, O. Halfon, P. Magistretti, and J. Cardinaux, “Complex regulation of CREB-binding protein by homeodomain-interacting protein kinase 2,” Cellular Signalling, vol. 27, no. 11. Elsevier, pp. 2252–2260, 2015.
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2015 | Journal Article | IST-REx-ID: 1664 |

D. Barkley, B. Song, M. Vasudevan, G. M. Lemoult, M. Avila, and B. Hof, “The rise of fully turbulent flow,” Nature, vol. 526, no. 7574. Nature Publishing Group, pp. 550–553, 2015.
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2015 | Journal Article | IST-REx-ID: 1665 |

D. Landau et al., “Mutations driving CLL and their evolution in progression and relapse,” Nature, vol. 526, no. 7574. Nature Publishing Group, pp. 525–530, 2015.
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| PubMed | Europe PMC
2015 | Conference Paper | IST-REx-ID: 1667 |

T. Brázdil, L. Korenčiak, J. Krčál, P. Novotný, and V. Řehák, “Optimizing performance of continuous-time stochastic systems using timeout synthesis,” vol. 9259. Springer, pp. 141–159, 2015.
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2015 | Conference Paper | IST-REx-ID: 1668 |

P. Gazi, J. Lee, Y. Seurin, J. Steinberger, and S. Tessaro, “Relaxing full-codebook security: A refined analysis of key-length extension schemes,” vol. 9054. Springer, pp. 319–341, 2015.
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2015 | Conference Paper | IST-REx-ID: 1669 |

K. Z. Pietrzak and M. Skórski, “The chain rule for HILL pseudoentropy, revisited,” vol. 9230. Springer, pp. 81–98, 2015.
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2015 | Conference Paper | IST-REx-ID: 1670
S. Bogomolov, D. Magazzeni, S. Minopoli, and M. Wehrle, “PDDL+ planning with hybrid automata: Foundations of translating must behavior,” presented at the ICAPS: International Conference on Automated Planning and Scheduling, Jerusalem, Israel, 2015, pp. 42–46.
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2015 | Conference Paper | IST-REx-ID: 1671 |

P. Gazi, K. Z. Pietrzak, and S. Tessaro, “The exact PRF security of truncation: Tight bounds for keyed sponges and truncated CBC,” presented at the CRYPTO: International Cryptology Conference, Santa Barbara, CA, United States, 2015, vol. 9215, pp. 368–387.
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2015 | Conference Paper | IST-REx-ID: 1672 |

J. F. Alwen, R. Ostrovsky, H. Zhou, and V. Zikas, “Incoercible multi-party computation and universally composable receipt-free voting,” vol. 9216. Springer, pp. 763–780, 2015.
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2015 | Journal Article | IST-REx-ID: 1673 |

B. Adlam, K. Chatterjee, and M. Nowak, “Amplifiers of selection,” Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, vol. 471, no. 2181. Royal Society of London, 2015.
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2015 | Journal Article | IST-REx-ID: 1674 |

J. Lee and K. Schnelli, “Edge universality for deformed Wigner matrices,” Reviews in Mathematical Physics, vol. 27, no. 8. World Scientific Publishing, 2015.
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2015 | Conference Paper | IST-REx-ID: 1675
S. Dziembowski, S. Faust, V. Kolmogorov, and K. Z. Pietrzak, “Proofs of space,” vol. 9216. Springer, pp. 585–605, 2015.
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2015 | Journal Article | IST-REx-ID: 1677 |

J. Alt, “The local semicircle law for random matrices with a fourfold symmetry,” Journal of Mathematical Physics, vol. 56, no. 10. American Institute of Physics, 2015.
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2015 | Journal Article | IST-REx-ID: 1678 |

Á. Inglés Prieto et al., “Light-assisted small-molecule screening against protein kinases,” Nature Chemical Biology, vol. 11, no. 12. Nature Publishing Group, pp. 952–954, 2015.
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2015 | Journal Article | IST-REx-ID: 1679 |

G. M. Lemoult, P. Maier, and B. Hof, “Taylor’s Forest,” Physics of Fluids, vol. 27, no. 9. American Institute of Physics, 2015.
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2015 | Journal Article | IST-REx-ID: 1681 |

T. Priklopil and K. Chatterjee, “Evolution of decisions in population games with sequentially searching individuals,” Games, vol. 6, no. 4. Multidisciplinary Digital Publishing Institute, pp. 413–437, 2015.
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2015 | Journal Article | IST-REx-ID: 1682 |

P. Franek and M. Krcál, “Robust satisfiability of systems of equations,” Journal of the ACM, vol. 62, no. 4. ACM, 2015.
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2015 | Conference Paper | IST-REx-ID: 1685 |

V. Cohen Addad and A. N. de Mesmay, “A fixed parameter tractable approximation scheme for the optimal cut graph of a surface,” presented at the ESA: European Symposium on Algorithms, Patras, Greece, 2015, vol. 9294, pp. 386–398.
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2015 | Thesis | IST-REx-ID: 1401 |

V. Sharmanska, “Learning with attributes for object recognition: Parametric and non-parametrics views,” IST Austria, 2015.
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2015 | Conference Paper | IST-REx-ID: 1729
P. Cerny et al., “From non-preemptive to preemptive scheduling using synchronization synthesis,” vol. 9207. Springer, pp. 180–197, 2015.
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2015 | Journal Article | IST-REx-ID: 1666 |

M. Tugrul, T. Paixao, N. H. Barton, and G. Tkačik, “Dynamics of transcription factor binding site evolution,” PLoS Genetics, vol. 11, no. 11. Public Library of Science, 2015.
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2015 | Journal Article | IST-REx-ID: 1619 |

G. Chevereau et al., “Quantifying the determinants of evolutionary dynamics leading to drug resistance,” PLoS Biology, vol. 13, no. 11. Public Library of Science, 2015.
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2014 | Journal Article | IST-REx-ID: 2261 |

F. Zhu et al., “DICE, an efficient system for iterative genomic editing in human pluripotent stem cells,” Nucleic Acids Research, vol. 42, no. 5. Oxford University Press, 2014.
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2014 | Conference Paper | IST-REx-ID: 2275 |

C. Olsson, J. Ulen, Y. Boykov, and V. Kolmogorov, “Partial enumeration and curvature regularization,” presented at the ICCV: International Conference on Computer Vision, Sydney, Australia, 2014, pp. 2936–2943.
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2014 | Journal Article | IST-REx-ID: 2285 |

J. Hosp et al., “Morpho-physiological criteria divide dentate gyrus interneurons into classes,” Hippocampus, vol. 23, no. 2. Wiley-Blackwell, pp. 189–203, 2014.
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2014 | Journal Article | IST-REx-ID: 2699 |

L. Erdös, P. Bourgade, and H. Yau, “Universality of general β-ensembles,” Duke Mathematical Journal, vol. 163, no. 6. Duke University Press, pp. 1127–1190, 2014.
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2014 | Journal Article | IST-REx-ID: 2716 |

K. Chatterjee, M. Randour, and J. Raskin, “Strategy synthesis for multi-dimensional quantitative objectives,” Acta Informatica, vol. 51, no. 3–4. Springer, pp. 129–163, 2014.
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2014 | Journal Article | IST-REx-ID: 2852
M. Fischlin, A. Lehmann, and K. Z. Pietrzak, “Robust multi-property combiners for hash functions,” Journal of Cryptology, vol. 27, no. 3. Springer, pp. 397–428, 2014.
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2014 | Conference Paper | IST-REx-ID: 2905 |

H. Edelsbrunner and D. Morozovy, “Persistent homology: Theory and practice,” presented at the ECM: European Congress of Mathematics, Kraków, Poland, 2014, pp. 31–50.
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2014 | Conference Paper | IST-REx-ID: 8044 |

R. Seiringer, “Structure of the excitation spectrum for many-body quantum systems,” in Proceeding of the International Congress of Mathematicans, Seoul, South Korea, 2014, vol. 3, pp. 1175–1194.
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2014 | Conference Paper | IST-REx-ID: 1702 |

A. Gupta, C. Popeea, and A. Rybalchenko, “Generalised interpolation by solving recursion free-horn clauses,” in Electronic Proceedings in Theoretical Computer Science, EPTCS, Vienna, Austria, 2014, vol. 169, pp. 31–38.
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2014 | Conference Paper | IST-REx-ID: 1708
C. Savin and S. Denève, “Spatio-temporal representations of uncertainty in spiking neural networks,” presented at the NIPS: Neural Information Processing Systems, Montreal, Canada, 2014, vol. 3, no. January, pp. 2024–2032.
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2014 | Journal Article | IST-REx-ID: 1733 |

P. Cerny, M. Chmelik, T. A. Henzinger, and A. Radhakrishna, “Interface simulation distances,” Theoretical Computer Science, vol. 560, no. 3. Elsevier, pp. 348–363, 2014.
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2014 | Journal Article | IST-REx-ID: 1816 |

S. Huber, M. Held, P. Meerwald, and R. Kwitt, “Topology-preserving watermarking of vector graphics,” International Journal of Computational Geometry and Applications, vol. 24, no. 1. World Scientific Publishing, pp. 61–86, 2014.
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2014 | Journal Article | IST-REx-ID: 1821 |

R. Seiringer, “Bose gases, Bose-Einstein condensation, and the Bogoliubov approximation,” Journal of Mathematical Physics, vol. 55, no. 7. American Institute of Physics, 2014.
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2014 | Journal Article | IST-REx-ID: 1842 |

J. Cibulka, P. Gao, M. Krcál, T. Valla, and P. Valtr, “On the geometric ramsey number of outerplanar graphs,” Discrete & Computational Geometry, vol. 53, no. 1. Springer, pp. 64–79, 2014.
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2014 | Journal Article | IST-REx-ID: 1844 |

V. Risso et al., “Mutational studies on resurrected ancestral proteins reveal conservation of site-specific amino acid preferences throughout evolutionary history,” Molecular Biology and Evolution, vol. 32, no. 2. Oxford University Press, pp. 440–455, 2014.
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2014 | Journal Article | IST-REx-ID: 1852 |

M. Sassi et al., “An auxin-mediated shift toward growth isotropy promotes organ formation at the shoot meristem in Arabidopsis,” Current Biology, vol. 24, no. 19. Cell Press, pp. 2335–2342, 2014.
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2014 | Journal Article | IST-REx-ID: 1854 |

P. Guerrero, T. Auzinger, M. Wimmer, and S. Jeschke, “Partial shape matching using transformation parameter similarity,” Computer Graphics Forum, vol. 34, no. 1. Wiley, pp. 239–252, 2014.
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2014 | Journal Article | IST-REx-ID: 1862 |

X. Chen et al., “Inhibition of cell expansion by rapid ABP1-mediated auxin effect on microtubules,” Nature, vol. 516, no. 729. Nature Publishing Group, pp. 90–93, 2014.
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2014 | Conference Paper | IST-REx-ID: 1870 |

T. A. Henzinger, J. Otop, and R. Samanta, “Lipschitz robustness of finite-state transducers,” in Leibniz International Proceedings in Informatics, LIPIcs, Delhi, India, 2014, vol. 29, pp. 431–443.
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2014 | Conference Paper | IST-REx-ID: 1872 |

A. Gupta, L. Kovács, B. Kragl, and A. Voronkov, “Extensional crisis and proving identity,” in ATVA 2014, Sydney, Australia, 2014, vol. 8837, pp. 185–200.
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2014 | Conference Paper | IST-REx-ID: 1875 |

R. Samanta, O. Olivo, and E. Allen, “Cost-aware automatic program repair,” presented at the SAS: Static Analysis Symposium, Munich, Germany, 2014, vol. 8723, pp. 268–284.
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2014 | Journal Article | IST-REx-ID: 1876 |

N. Dolbilin, H. Edelsbrunner, A. Glazyrin, and O. Musin, “Functionals on triangulations of delaunay sets,” Moscow Mathematical Journal, vol. 14, no. 3. Independent University of Moscow, pp. 491–504, 2014.
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2014 | Journal Article | IST-REx-ID: 1884
D. Landau et al., “Novel putative driver gene mutations in chronic lymphocytic leukemia (CLL): results from a combined analysis of whole exome sequencing of 262 primary CLL aamples,” Blood, vol. 124, no. 21. American Society of Hematology, pp. 1952–1952, 2014.
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2014 | Journal Article | IST-REx-ID: 1886 |

A. Hermundstad, J. Briguglio, M. Conte, J. Victor, V. Balasubramanian, and G. Tkačik, “Variance predicts salience in central sensory processing,” eLife, no. November. eLife Sciences Publications, 2014.
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