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3208 Publications


2016 | Research Data | IST-REx-ID: 5550 | OA View | Files available | DOI
 

2016 | Research Data | IST-REx-ID: 5551 | OA View | Files available | DOI
 
 

2016 | Research Data | IST-REx-ID: 5553 | OA View | Files available | DOI
 

2016 | Research Data | IST-REx-ID: 5555 | OA View | Files available | DOI
 
 

2016 | Research Data | IST-REx-ID: 5557 | OA View | Files available | DOI
 

2016 | Research Data | IST-REx-ID: 5558 | OA View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1270 | OA View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1271 | OA
Steering cell migration by alternating blebs and actin-rich protrusions
A. Diz Muñoz, P. Romanczuk, W. Yu, M. Bergert, K. Ivanovitch, G. Salbreux, C.-P.J. Heisenberg, E. Paluch, BMC Biology 14 (2016).
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2016 | Journal Article | IST-REx-ID: 1272 | OA
Generalized offsetting of planar structures using skeletons
M. Held, S. Huber, P. Palfrader, Computer-Aided Design and Applications 13 (2016) 712–721.
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2016 | Journal Article | IST-REx-ID: 1273 | OA
Lateral root emergence in Arabidopsis is dependent on transcription factor LBD29 regulation of auxin influx carrier LAX3
S. Porco, A. Larrieu, Y. Du, A. Gaudinier, T. Goh, K. Swarup, R. Swarup, B. Kuempers, A. Bishopp, J. Lavenus, I. Casimiro, K. Hill, E. Benková, H. Fukaki, S. Brady, B. Scheres, B. Peéet, M. Bennett, Development 143 (2016) 3340–3349.
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2016 | Journal Article | IST-REx-ID: 1274 | OA
Vascular cambium regeneration and vessel formation in wounded inflorescence stems of Arabidopsis
E. Mazur, E. Benková, J. Friml, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1275
Callan-Jones et al. Reply
A. Callan Jones, V. Ruprecht, S. Wieser, C.-P.J. Heisenberg, R. Voituriez, Physical Review Letters 117 (2016).
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2016 | Journal Article | IST-REx-ID: 1276 | OA
Atomistic determinants of co-enzyme Q reduction at the Qi-site of the cytochrome bc1 complex
P. Postila, K. Kaszuba, P. Kuleta, I. Vattulainen, M. Sarewicz, A. Osyczka, T. Róg, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1277 | OA
Danger-associated peptide signaling in Arabidopsis requires clathrin
F. Ortiz Morea, D. Savatin, W. Dejonghe, R. Kumar, Y. Luo, M. Adamowski, J. Van Begin, K. Dressano, G. De Oliveira, X. Zhao, Q. Lu, A. Madder, J. Friml, D. De Moura, E. Russinova, PNAS 113 (2016) 11028–11033.
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2016 | Journal Article | IST-REx-ID: 1278 | OA View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1279 | OA
Optogenetically blocking sharp wave ripple events in sleep does not interfere with the formation of stable spatial representation in the CA1 area of the hippocampus
K. Kovács, J. O’Neill, P. Schönenberger, M. Penttonen, D.K. Rangel Guerrero, J.L. Csicsvari, PLoS One 11 (2016).
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2016 | Journal Article | IST-REx-ID: 1280 | OA
Fixed energy universality for generalized wigner matrices
P. Bourgade, L. Erdös, H. Yau, J. Yin, Communications on Pure and Applied Mathematics 69 (2016) 1815–1881.
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2016 | Journal Article | IST-REx-ID: 1281 | OA
Nitrate controls root development through posttranscriptional regulation of the NRT1.1/NPF6.3 transporter sensor
E. Bouguyon, F. Perrine Walker, M. Pervent, J. Rochette, C. Cuesta, E. Benková, A. Martinière, L. Bach, G. Krouk, A. Gojon, P. Nacry, Plant Physiology 172 (2016) 1237–1248.
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2016 | Journal Article | IST-REx-ID: 1282 | OA
On eigenvalues of random complexes
A. Gundert, U. Wagner, Israel Journal of Mathematics 216 (2016) 545–582.
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2016 | Journal Article | IST-REx-ID: 1283
Seedlings’ strategy to overcome a soil barrier
Q. Zhu, E. Benková, Trends in Plant Science 21 (2016) 809–811.
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2016 | Journal Article | IST-REx-ID: 1285
Focal adhesion-independent cell migration
E. Paluch, I. Aspalter, M.K. Sixt, Annual Review of Cell and Developmental Biology 32 (2016) 469–490.
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2016 | Journal Article | IST-REx-ID: 1286 | OA
Rotation of cold molecular ions inside a Bose-Einstein condensate
B. Midya, M. Tomza, R. Schmidt, M. Lemeshko, Physical Review A - Atomic, Molecular, and Optical Physics 94 (2016).
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2016 | Journal Article | IST-REx-ID: 1287 | OA
Modes and exceptional points in waveguides with impedance boundary conditions
B. Midya, V. Konotop, Optics Letters 41 (2016) 4621–4624.
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2016 | Journal Article | IST-REx-ID: 1288
Reversible FMN dissociation from Escherichia coli respiratory complex I
P. Holt, R. Efremov, E. Nakamaru Ogiso, L.A. Sazanov, Biochimica et Biophysica Acta - Bioenergetics 1857 (2016) 1777–1785.
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2016 | Journal Article | IST-REx-ID: 1289 | OA
The classification of endoscopy images with persistent homology
O. Dunaeva, H. Edelsbrunner, A. Lukyanov, M. Machin, D. Malkova, R. Kuvaev, S. Kashin, Pattern Recognition Letters 83 (2016) 13–22.
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2016 | Journal Article | IST-REx-ID: 1290 | OA
Compounds that select against the tetracycline-resistance efflux pump
L. Stone, M. Baym, T. Lieberman, R.P. Chait, J. Clardy, R. Kishony, Nature Chemical Biology 12 (2016) 902–904.
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2016 | Journal Article | IST-REx-ID: 1291 | OA
Periodic striped ground states in Ising models with competing interactions
A. Giuliani, R. Seiringer, Communications in Mathematical Physics 347 (2016) 983–1007.
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2016 | Journal Article | IST-REx-ID: 1292 | OA
Computing the Thurston–Bennequin invariant in open books
S. Durst, M. Kegel, M.D. Klukas, Acta Mathematica Hungarica 150 (2016) 441–455.
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2016 | Journal Article | IST-REx-ID: 1293 | OA
Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors
L.T. Solus, C. Uhler, R. Yoshida, Linear Algebra and Its Applications 509 (2016) 247–275.
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2016 | Journal Article | IST-REx-ID: 1295
Multiple covers with balls II: Weighted averages
H. Edelsbrunner, M. Iglesias Ham, Electronic Notes in Discrete Mathematics 54 (2016) 169–174.
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2016 | Conference Paper | IST-REx-ID: 1319
DefSense: computational design of customized deformable input devices
M. Bächer, B. Hepp, F. Pece, P. Kry, B. Bickel, B. Thomaszewski, O. Hilliges, in:, ACM, 2016, pp. 3806–3816.
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2016 | Conference Paper | IST-REx-ID: 1320 View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1322 | OA
Asymmetric power boosts extortion in an economic experiment
C. Hilbe, K. Hagel, M. Milinski, PLoS One 11 (2016).
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2016 | Journal Article | IST-REx-ID: 1323 | OA View | Files available | DOI
 

2016 | Conference Paper | IST-REx-ID: 1324
Indefinite-horizon reachability in Goal-DEC-POMDPs
K. Chatterjee, M. Chmelik, in:, Proceedings of the Twenty-Sixth International Conference on International Conference on Automated Planning and Scheduling, AAAI Press, 2016, pp. 88–96.
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2016 | Conference Paper | IST-REx-ID: 1325 | OA
Stability in graphs and games
T. Brázdil, V. Forejt, A. Kučera, P. Novotný, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
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2016 | Conference Paper | IST-REx-ID: 1326 | OA
Optimizing the expected mean payoff in Energy Markov Decision Processes
T. Brázdil, A. Kučera, P. Novotný, in:, Springer, 2016, pp. 32–49.
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2016 | Conference Paper | IST-REx-ID: 1327 | OA
Stochastic shortest path with energy constraints in POMDPs
T. Brázdil, K. Chatterjee, M. Chmelik, A. Gupta, P. Novotný, in:, Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems, ACM, 2016, pp. 1465–1466.
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2016 | Journal Article | IST-REx-ID: 1328 | OA
Heavy-hole states in germanium hut wires
H. Watzinger, C. Kloeffel, L. Vukušić, M. Rossell, V. Sessi, J. Kukucka, R. Kirchschlager, E. Lausecker, A. Truhlar, M. Glaser, A. Rastelli, A. Fuhrer, D. Loss, G. Katsaros, Nano Letters 16 (2016) 6879–6885.
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2016 | Journal Article | IST-REx-ID: 1329 | OA
De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata
A.K. Huylmans, A. López Ezquerra, J. Parsch, M. Cordellier, Genome Biology and Evolution 8 (2016) 3120–3139.
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2016 | Journal Article | IST-REx-ID: 1330 | OA
Billiards in convex bodies with acute angles
A. Akopyan, A. Balitskiy, Israel Journal of Mathematics 216 (2016) 833–845.
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2016 | Journal Article | IST-REx-ID: 1331
Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress
P. Zwack, I. De Clercq, T. Howton, H.T. Hallmark, A. Hurny, E. Keshishian, A. Parish, E. Benková, M.S. Mukhtar, F. Van Breusegem, A. Rashotte, Plant Physiology 172 (2016) 1249–1258.
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2016 | Journal Article | IST-REx-ID: 1332 | OA
Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments
R.P. Chait, A. Palmer, I. Yelin, R. Kishony, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1333 | OA
Humans choose representatives who enforce cooperation in social dilemmas through extortion
M. Milinski, C. Hilbe, D. Semmann, R. Sommerfeld, J. Marotzke, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1334 | OA
Activity dependent plasticity of hippocampal place maps
P. Schönenberger, J. O’Neill, J.L. Csicsvari, Nature Communications 7 (2016).
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2016 | Conference Paper | IST-REx-ID: 1335 | OA
Quantitative monitor automata
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Springer, 2016, pp. 23–38.
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2016 | Journal Article | IST-REx-ID: 1339 | OA
Tunable mechanical coupling between driven microelectromechanical resonators
G. Verbiest, D. Xu, M. Goldsche, T. Khodkov, S. Barzanjeh, N. Von Den Driesch, D. Buca, C. Stampfer, Applied  Physics Letter 109 (2016).
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2016 | Conference Paper | IST-REx-ID: 1340 | OA
The big match in small space
K. Hansen, R. Ibsen-Jensen, M. Koucký, in:, Springer, 2016, pp. 64–76.
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2016 | Conference Paper | IST-REx-ID: 1341 | OA
Dynamic resource allocation games
G. Avni, T.A. Henzinger, O. Kupferman, in:, Springer, 2016, pp. 153–166.
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2016 | Journal Article | IST-REx-ID: 1342 | OA
Spatiotemporal microbial evolution on antibiotic landscapes
M. Baym, T. Lieberman, E. Kelsic, R.P. Chait, R. Gross, I. Yelin, R. Kishony, Science 353 (2016) 1147–1151.
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2016 | Journal Article | IST-REx-ID: 1343 | OA
Dissipative preparation of antiferromagnetic order in the Fermi-Hubbard model
J. Kaczmarczyk, H. Weimer, M. Lemeshko, New Journal of Physics 18 (2016).
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2016 | Journal Article | IST-REx-ID: 1344 | OA View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1345 | OA
Plasma membrane: Negative attraction
G. Molnar, M. Fendrych, J. Friml, Nature Plants 2 (2016).
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2016 | Journal Article | IST-REx-ID: 1346 | OA
Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification
Dejonghe W, Kuenen S, Mylle E, Vasileva MK, Keech O, Viotti C, Swerts J, Fendrych M, Ortiz Morea F, Mishev K, Delang S, Scholl S, Zarza X, Heilmann M, Kourelis J, Kasprowicz J, Nguyen L, Drozdzecki A, Van Houtte I, Szatmári A, Majda M, Baisa G, Bednarek S, Robert S, Audenaert D, Testerink C, Munnik T, Van Damme D, Heilmann I, Schumacher K, Winne J, Friml J, Verstreken P, Russinova E. 2016. Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification. Nature Communications. 7, 11710.
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2016 | Journal Article | IST-REx-ID: 1347 | OA
Deformation of a quantum many-particle system by a rotating impurity
R. Schmidt, M. Lemeshko, Physical Review X 6 (2016).
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2016 | Conference Paper | IST-REx-ID: 1348 | OA
Bounded embeddings of graphs in the plane
R. Fulek, in:, Springer, 2016, pp. 31–42.
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2016 | Conference Paper | IST-REx-ID: 1349 | OA
When non-elitism outperforms elitism for crossing fitness valleys
P. Oliveto, T. Paixao, J. Heredia, D. Sudholt, B. Trubenova, in:, Proceedings of the Genetic and Evolutionary Computation Conference 2016 , ACM, 2016, pp. 1163–1170.
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2016 | Journal Article | IST-REx-ID: 1350 | OA
Synaptic mechanisms of pattern completion in the hippocampal CA3 network
J. Guzmán, A. Schlögl, M. Frotscher, P.M. Jonas, Science 353 (2016) 1117–1123.
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2016 | Journal Article | IST-REx-ID: 1352 | OA
Coexistence of nematic order and superconductivity in the Hubbard model
J. Kaczmarczyk, T. Schickling, J. Bünemann, Physical Review B - Condensed Matter and Materials Physics 94 (2016).
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2016 | Journal Article | IST-REx-ID: 1353 | OA
Deciding absorption
L. Barto, A. Kazda, International Journal of Algebra and Computation 26 (2016) 1033–1060.
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2016 | Journal Article | IST-REx-ID: 1354 | OA
Superconducting cavity electromechanics on a silicon-on-insulator platform
P. Dieterle, M. Kalaee, J.M. Fink, O. Painter, Physical Review Applied 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1355 | OA
Quantum electromechanics on silicon nitride nanomembranes
J.M. Fink, M. Kalaee, A. Pitanti, R. Norte, L. Heinzle, M. Davanço, K. Srinivasan, O. Painter, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1356 | OA View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1357 | OA
Richard Hudson and Norman Kaplan on the coalescent process
N.H. Barton, Genetics 202 (2016) 865–866.
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2016 | Journal Article | IST-REx-ID: 1358 | OA
Intrinsic limits to gene regulation by global crosstalk
T. Friedlander, R. Prizak, C.C. Guet, N.H. Barton, G. Tkačik, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1359 | OA
The effect of gene interactions on the long-term response to selection
T. Paixao, N.H. Barton, PNAS 113 (2016) 4422–4427.
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2016 | Journal Article | IST-REx-ID: 1360 | OA
Elementary approach to closed billiard trajectories in asymmetric normed spaces
A. Akopyan, A. Balitskiy, R. Karasev, A. Sharipova, Proceedings of the American Mathematical Society 144 (2016) 4501–4513.
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2016 | Conference Paper | IST-REx-ID: 1361 | OA
Surface only liquids
F. Da, D. Hahn, C. Batty, C.J. Wojtan, E. Grinspun, in:, ACM, 2016.
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2016 | Conference Paper | IST-REx-ID: 1362 | OA View | Files available | DOI
 

2016 | Conference Paper | IST-REx-ID: 1363 | OA
Generalized non-reflecting boundaries for fluid re-simulation
M. Bojsen-Hansen, C.J. Wojtan, in:, ACM, 2016.
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2016 | Conference Paper | IST-REx-ID: 1364 | OA
Computational design of stable planar-rod structures
E. Miguel Villalba, M. Lepoutre, B. Bickel, in:, ACM, 2016.
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2016 | Conference Paper | IST-REx-ID: 1365 | OA
Efficiently computing data-independent memory-hard functions
J.F. Alwen, J. Blocki, in:, Springer, 2016, pp. 241–271.
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2016 | Conference Paper | IST-REx-ID: 1366 | OA
Provably robust sponge-based PRNGs and KDFs
P. Gazi, S. Tessaro, in:, Springer, 2016, pp. 87–116.
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2016 | Journal Article | IST-REx-ID: 1368 | OA
Correlation driven d wave superconductivity in Anderson lattice model: Two gaps
M. Wysokiński, J. Kaczmarczyk, J. Spałek, Physical Review B - Condensed Matter and Materials Physics 94 (2016).
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2016 | Conference Paper | IST-REx-ID: 1369 | OA
Seed, expand and constrain: Three principles for weakly-supervised image segmentation
A. Kolesnikov, C. Lampert, in:, Springer, 2016, pp. 695–711.
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2016 | Journal Article | IST-REx-ID: 1370 | OA
Phonon Josephson junction with nanomechanical resonators
S. Barzanjeh, D. Vitali, Physical Review A - Atomic, Molecular, and Optical Physics 93 (2016).
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2016 | Journal Article | IST-REx-ID: 1371
Drivers of structural features in gene regulatory networks: From biophysical constraints to biological function
O. Martin, A. Krzywicki, M.P. Zagórski, Physics of Life Reviews 17 (2016) 124–158.
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2016 | Journal Article | IST-REx-ID: 1372 | OA
Cytokinins influence root gravitropism via differential regulation of auxin transporter expression and localization in Arabidopsis
M. Pernisová, T. Prat, P. Grones, D. Haruštiaková, M. Matonohova, L. Spíchal, T. Nodzyński, J. Friml, J. Hejátko, New Phytologist 212 (2016) 497–509.
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2016 | Journal Article | IST-REx-ID: 1377 | OA
Total variation on a tree
V. Kolmogorov, T. Pock, M. Rolinek, SIAM Journal on Imaging Sciences 9 (2016) 605–636.
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2016 | Conference Paper | IST-REx-ID: 1378 | OA
On expansion and topological overlap
D. Dotterrer, T. Kaufman, U. Wagner, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 2016, p. 35.1-35.10.
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2016 | Conference Paper | IST-REx-ID: 1379 | OA
Finding non-orientable surfaces in 3-manifolds
B. Burton, A.N. de Mesmay, U. Wagner, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 2016, p. 24.1-24.15.
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2016 | Journal Article | IST-REx-ID: 1380 | OA
On the complexity of the orbit problem
V.K. Chonev, J. Ouaknine, J. Worrell, Journal of the ACM 63 (2016).
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2016 | Conference Paper | IST-REx-ID: 1381 | OA
Eliminating higher-multiplicity intersections, II. The deleted product criterion in the r-metastable range
I. Mabillard, U. Wagner, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, 2016, p. 51.1-51.12.
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2016 | Journal Article | IST-REx-ID: 1382 View | Files available | DOI
 

2016 | Conference Paper | IST-REx-ID: 1389 | OA
On recurrent reachability for continuous linear dynamical systems
V.K. Chonev, J. Ouaknine, J. Worrell, in:, LICS ’16, IEEE, 2016, pp. 515–524.
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2016 | Conference Paper | IST-REx-ID: 1390
QLOSE: Program repair with quantitative objectives
L. D’Antoni, R. Samanta, R. Singh, in:, Springer, 2016, pp. 383–401.
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2016 | Conference Paper | IST-REx-ID: 1391 | OA
Array folds logic
P. Daca, T.A. Henzinger, A. Kupriyanov, in:, Springer, 2016, pp. 230–248.
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2016 | Journal Article | IST-REx-ID: 1394 | OA View | DOI | Download Preprint (ext.)
 

2016 | Thesis | IST-REx-ID: 1397
Algorithms for partially observable markov decision processes
M. Chmelik, Algorithms for Partially Observable Markov Decision Processes, IST Austria, 2016.
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2016 | Thesis | IST-REx-ID: 1398 | OA
The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone
T. Ellis, The Role of Pollinator-Mediated Selection in the Maintenance of a Flower Color Polymorphism in an Antirrhinum Majus Hybrid Zone, IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1408 | OA
On computability and triviality of well groups
P. Franek, M. Krcál, Discrete & Computational Geometry 56 (2016) 126–164.
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2016 | Journal Article | IST-REx-ID: 1409 | OA
Genomics of hybridization and its evolutionary consequences
R. Abbott, N.H. Barton, J. Good, Molecular Ecology 25 (2016) 2325–2332.
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2016 | Journal Article | IST-REx-ID: 1410 | OA
Phosphatidylinositol 4-phosphate 5-kinases 1 and 2 are involved in the regulation of vacuole morphology during Arabidopsis thaliana pollen development
J. Ugalde, C. Rodríguez Furlán, R. De Rycke, L. Norambuena, J. Friml, G. León, R. Tejos, Plant Science 250 (2016) 10–19.
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2016 | Journal Article | IST-REx-ID: 1411 | OA
Untangling two systems of noncrossing curves
J. Matoušek, E. Sedgwick, M. Tancer, U. Wagner, Israel Journal of Mathematics 212 (2016) 37–79.
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2016 | Journal Article | IST-REx-ID: 1412 | OA
A practical method for high-resolution embedded liquid surfaces
R. Goldade, C. Batty, C.J. Wojtan, Computer Graphics Forum 35 (2016) 233–242.
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2016 | Journal Article | IST-REx-ID: 1413 View | DOI
 

2016 | Journal Article | IST-REx-ID: 1414
Modeling and estimation of energy-based hyperelastic objects
E. Miguel Villalba, D. Miraut, M. Otaduy, Computer Graphics Forum 35 (2016) 385–396.
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