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38 Publications


2022 | Journal Article | IST-REx-ID: 12261 | OA
Angermayr A, Pang TY, Chevereau G, Mitosch K, Lercher MJ, Bollenbach MT. 2022. Growth‐mediated negative feedback shapes quantitative antibiotic response. Molecular Systems Biology. 18(9), e10490.
[Published Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 7026 | OA
Lukacisin M, Bollenbach MT. 2019. Emergent gene expression responses to drug combinations predict higher-order drug interactions. Cell Systems. 9(5), 423-433.e1-e3.
[Published Version] View | Files available | DOI | WoS
 

2019 | Thesis | IST-REx-ID: 6392 | OA
Lukacisin M. 2019. Quantitative investigation of gene expression principles through combinatorial drug perturbation and theory. IST Austria.
[Published Version] View | Files available | DOI
 

2018 | Thesis | IST-REx-ID: 6263 | OA
Lukacisinova M. 2018. Genetic determinants of antibiotic resistance evolution. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 520
Du W, Angermayr A, Jongbloets J, Molenaar D, Bachmann H, Hellingwerf K, Branco Dos Santos F. 2017. Nonhierarchical flux regulation exposes the fitness burden associated with lactate production in Synechocystis sp. PCC6803. ACS Synthetic Biology. 6(3), 395–401.
View | DOI | PubMed | Europe PMC
 

2017 | Research Data Reference | IST-REx-ID: 9849
Lukacisinova M, Novak S, Paixao T. 2017. Modelling and simulation details, Public Library of Science, 10.1371/journal.pcbi.1005609.s001.
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9850
Lukacisinova M, Novak S, Paixao T. 2017. Extensions of the model, Public Library of Science, 10.1371/journal.pcbi.1005609.s002.
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9851
Lukacisinova M, Novak S, Paixao T. 2017. Heuristic prediction for multiple stresses, Public Library of Science, 10.1371/journal.pcbi.1005609.s003.
[Published Version] View | Files available | DOI
 

2017 | Research Data Reference | IST-REx-ID: 9852
Lukacisinova M, Novak S, Paixao T. 2017. Resistance frequencies for different combination strategies, Public Library of Science, 10.1371/journal.pcbi.1005609.s004.
[Published Version] View | Files available | DOI
 

2017 | Thesis | IST-REx-ID: 818 | OA
Mitosch K. 2017. Timing, variability and cross-protection in bacteria – insights from dynamic gene expression responses to antibiotics. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 666 | OA
Mitosch K, Rieckh G, Bollenbach MT. 2017. Noisy response to antibiotic stress predicts subsequent single cell survival in an acidic environment. Cell Systems. 4(4), 393–403.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 822 | OA
de Vos M, Zagórski MP, Mcnally A, Bollenbach MT. 2017. Interaction networks, ecological stability, and collective antibiotic tolerance in polymicrobial infections. PNAS. 114(40), 10666–10671.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

2017 | Research Data | IST-REx-ID: 5563 | OA
Lukacisin M. 2017. MATLAB analysis code for ‘Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:64.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 1029 | OA
Lukacisin M, Landon M, Jajoo R. 2017. Sequence-specific thermodynamic properties of nucleic acids influence both transcriptional pausing and backtracking in yeast. PLoS One. 12(3), e0174066.
[Published Version] View | Files available | DOI | WoS
 

2017 | Journal Article | IST-REx-ID: 696 | OA
Lukacisinova M, Novak S, Paixao T. 2017. Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology. 13(7), e1005609.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 1027 | OA
Lukacisinova M, Bollenbach MT. 2017. Toward a quantitative understanding of antibiotic resistance evolution. Current Opinion in Biotechnology. 46, 90–97.
[Published Version] View | Files available | DOI | WoS
 

2016 | Journal Article | IST-REx-ID: 1154 | OA
Schwarz J, Bierbaum V, Merrin J, Frank T, Hauschild R, Bollenbach MT, Tay S, Sixt MK, Mehling M. 2016. A microfluidic device for measuring cell migration towards substrate bound and soluble chemokine gradients. Scientific Reports. 6, 36440.
[Published Version] View | Files available | DOI
 

2016 | Journal Article | IST-REx-ID: 1218 | OA
Angermayr A, Van Alphen P, Hasdemir D, Kramer G, Iqbal M, Van Grondelle W, Hoefsloot H, Choi Y, Hellingwerf K. 2016. Culturing synechocystis sp. Strain pcc 6803 with N2 and CO2 in a diel regime reveals multiphase glycogen dynamics with low maintenance costs. Applied and Environmental Microbiology. 82(14), 4180–4189.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 

2016 | Journal Article | IST-REx-ID: 1552 | OA
Qi Q, Toll Riera M, Heilbron K, Preston G, Maclean RC. 2016. The genomic basis of adaptation to the fitness cost of rifampicin resistance in Pseudomonas aeruginosa. Proceedings of the Royal Society of London Series B Biological Sciences. 283(1822), 20152452.
[Published Version] View | Files available | DOI
 

2016 | Research Data | IST-REx-ID: 5556 | OA
Lukacisin M, Landon M, Jajoo R. 2016. MATLAB analysis code for ‘Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:45.
[Published Version] View | Files available | DOI
 

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