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30 Publications


2019 | Thesis | IST-REx-ID: 6392 | OA
Lukacisin, Martin. Quantitative Investigation of Gene Expression Principles through Combinatorial Drug Perturbation and Theory. IST Austria, 2019. https://doi.org/10.15479/AT:ISTA:6392.
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2019 | Journal Article | IST-REx-ID: 7026 | OA
Lukacisin, Martin, and Mark Tobias Bollenbach. “Emergent Gene Expression Responses to Drug Combinations Predict Higher-Order Drug Interactions.” Cell Systems 9, no. 5 (2019): 423-433.e1-e3. https://doi.org/10.1016/j.cels.2019.10.004.
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2018 | Thesis | IST-REx-ID: 6263 | OA
Lukacisinova, Marta. Genetic Determinants of Antibiotic Resistance Evolution. IST Austria, 2018. https://doi.org/10.15479/AT:ISTA:th1072.
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2017 | Journal Article | IST-REx-ID: 520
Du, Wei, Andreas Angermayr, Joeri Jongbloets, Douwe Molenaar, Herwig Bachmann, Klaas Hellingwerf, and Filipe Branco Dos Santos. “Nonhierarchical Flux Regulation Exposes the Fitness Burden Associated with Lactate Production in Synechocystis Sp. PCC6803.” ACS Synthetic Biology 6, no. 3 (2017): 395–401. https://doi.org/10.1021/acssynbio.6b00235.
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2017 | Research Data | IST-REx-ID: 5563 | OA
Lukacisin, Martin. MATLAB Analysis Code for “Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast.” IST Austria, 2017. https://doi.org/10.15479/AT:ISTA:64.
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2017 | Journal Article | IST-REx-ID: 666 | OA
Mitosch, Karin, Georg Rieckh, and Mark Tobias Bollenbach. “Noisy Response to Antibiotic Stress Predicts Subsequent Single Cell Survival in an Acidic Environment.” Cell Systems 4, no. 4 (2017): 393–403. https://doi.org/10.1016/j.cels.2017.03.001.
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2017 | Journal Article | IST-REx-ID: 696 | OA
Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Stress Induced Mutagenesis: Stress Diversity Facilitates the Persistence of Mutator Genes.” PLoS Computational Biology 13, no. 7 (2017). https://doi.org/10.1371/journal.pcbi.1005609.
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2017 | Thesis | IST-REx-ID: 818 | OA
Mitosch, Karin. Timing, Variability and Cross-Protection in Bacteria – Insights from Dynamic Gene Expression Responses to Antibiotics. IST Austria, 2017. https://doi.org/10.15479/AT:ISTA:th_862.
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2017 | Journal Article | IST-REx-ID: 822 | OA
De Vos, Marjon, Marcin P Zagórski, Alan Mcnally, and Mark Tobias Bollenbach. “Interaction Networks, Ecological Stability, and Collective Antibiotic Tolerance in Polymicrobial Infections.” PNAS 114, no. 40 (2017): 10666–71. https://doi.org/10.1073/pnas.1713372114.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 1027 | OA
Lukacisinova, Marta, and Mark Tobias Bollenbach. “Toward a Quantitative Understanding of Antibiotic Resistance Evolution.” Current Opinion in Biotechnology 46 (2017): 90–97. https://doi.org/10.1016/j.copbio.2017.02.013.
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2017 | Journal Article | IST-REx-ID: 1029 | OA
Lukacisin, Martin, Matthieu Landon, and Rishi Jajoo. “Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast.” PLoS One 12, no. 3 (2017). https://doi.org/10.1371/journal.pone.0174066.
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2016 | Journal Article | IST-REx-ID: 1552 | OA
Qi, Qin, Macarena Toll Riera, Karl Heilbron, Gail Preston, and R Craig Maclean. “The Genomic Basis of Adaptation to the Fitness Cost of Rifampicin Resistance in Pseudomonas Aeruginosa.” Proceedings of the Royal Society of London Series B Biological Sciences 283, no. 1822 (2016). https://doi.org/10.1098/rspb.2015.2452.
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2016 | Journal Article | IST-REx-ID: 1218 | OA
Angermayr, Andreas, Pascal Van Alphen, Dicle Hasdemir, Gertjan Kramer, Muzamal Iqbal, Wilmar Van Grondelle, Huub Hoefsloot, Younghae Choi, and Klaas Hellingwerf. “Culturing Synechocystis Sp. Strain Pcc 6803 with N2 and CO2 in a Diel Regime Reveals Multiphase Glycogen Dynamics with Low Maintenance Costs.” Applied and Environmental Microbiology 82, no. 14 (2016): 4180–89. https://doi.org/10.1128/AEM.00256-16.
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2016 | Journal Article | IST-REx-ID: 1154 | OA
Schwarz, Jan, Veronika Bierbaum, Jack Merrin, Tino Frank, Robert Hauschild, Mark Tobias Bollenbach, Savaş Tay, Michael K Sixt, and Matthias Mehling. “A Microfluidic Device for Measuring Cell Migration towards Substrate Bound and Soluble Chemokine Gradients.” Scientific Reports 6 (2016). https://doi.org/10.1038/srep36440.
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2016 | Research Data | IST-REx-ID: 5556 | OA
Lukacisin, Martin, Matthieu Landon, and Rishi Jajoo. MATLAB Analysis Code for “Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast.” IST Austria, 2016. https://doi.org/10.15479/AT:ISTA:45.
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2015 | Journal Article | IST-REx-ID: 1571
De Vos, Marjon, Alexandre Dawid, Vanda Šunderlíková, and Sander Tans. “Breaking Evolutionary Constraint with a Tradeoff Ratchet.” PNAS 112, no. 48 (2015): 14906–11. https://doi.org/10.1073/pnas.1510282112.
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2015 | Journal Article | IST-REx-ID: 1586
Angermayr, Andreas, Aleix Gorchs, and Klaas Hellingwerf. “Metabolic Engineering of Cyanobacteria for the Synthesis of Commodity Products.” Trends in Biotechnology 33, no. 6 (2015): 352–61. https://doi.org/10.1016/j.tibtech.2015.03.009.
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2015 | Journal Article | IST-REx-ID: 1619 | OA
Chevereau, Guillaume, Marta Lukacisinova, Tugce Batur, Aysegul Guvenek, Dilay Ayhan, Erdal Toprak, and Mark Tobias Bollenbach. “Quantifying the Determinants of Evolutionary Dynamics Leading to Drug Resistance.” PLoS Biology 13, no. 11 (2015). https://doi.org/10.1371/journal.pbio.1002299.
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2015 | Journal Article | IST-REx-ID: 1623 | OA
Hammar, Petter, Andreas Angermayr, Staffan Sjostrom, Josefin Van Der Meer, Klaas Hellingwerf, Elton Hudson, and Hakaan Joensson. “Single-Cell Screening of Photosynthetic Growth and Lactate Production by Cyanobacteria.” Biotechnology for Biofuels 8, no. 1 (2015). https://doi.org/10.1186/s13068-015-0380-2.
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2015 | Journal Article | IST-REx-ID: 1810 | OA
Bollenbach, Mark Tobias. “Antimicrobial Interactions: Mechanisms and Implications for Drug Discovery and Resistance Evolution.” Current Opinion in Microbiology 27 (2015): 1–9. https://doi.org/10.1016/j.mib.2015.05.008.
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