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159 Publications


2019 | Journal Article | IST-REx-ID: 7422 | OA
Sokolowski TR, Paijmans J, Bossen L, Miedema T, Wehrens M, Becker NB, Kaizu K, Takahashi K, Dogterom M, ten Wolde PR. 2019. eGFRD in all dimensions. The Journal of Chemical Physics. 150(5), 054108.
View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Preprint | IST-REx-ID: 7552 | OA
Bialek W, Gregor T, Tkačik G. Action at a distance in transcriptional regulation. arXiv:1912.08579, .
View | Download Preprint (ext.) | arXiv
 

2019 | Conference Paper | IST-REx-ID: 7606 | OA
Hledik M, Sokolowski TR, Tkačik G. 2019. A tight upper bound on mutual information. IEEE Information Theory Workshop, ITW 2019. Information Theory Workshop, 8989292.
View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 5817 | OA
Kavcic B, Sakashita A, Noguchi H, Ziherl P. 2019. Limiting shapes of confined lipid vesicles. Soft Matter. 15(4), 602–614.
View | Files available | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 5945 | OA
Petkova MD, Tkačik G, Bialek W, Wieschaus EF, Gregor T. 2019. Optimal decoding of cellular identities in a genetic network. Cell. 176(4), 844–855.e15.
View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6046 | OA
Mitosch K, Rieckh G, Bollenbach MT. 2019. Temporal order and precision of complex stress responses in individual bacteria. Molecular systems biology. 15(2), e8470.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6049 | OA
De Martino D. 2019. Feedback-induced self-oscillations in large interacting systems subjected to phase transitions. Journal of Physics A: Mathematical and Theoretical. 52(4), 045002.
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2019 | Thesis | IST-REx-ID: 6071 | OA
Prizak R. 2019. Coevolution of transcription factors and their binding sites in sequence space. IST Austria.
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2019 | Journal Article | IST-REx-ID: 6090 | OA
Carballo-Pacheco M, Desponds J, Gavrilchenko T, Mayer A, Prizak R, Reddy G, Nemenman I, Mora T. 2019. Receptor crosstalk improves concentration sensing of multiple ligands. Physical Review E. 99(2), 022423.
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2019 | Thesis | IST-REx-ID: 6473 | OA
Cepeda Humerez SA. 2019. Estimating information flow in single cells. IST Austria.
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2019 | Journal Article | IST-REx-ID: 6900 | OA
Cepeda Humerez SA, Ruess J, Tkačik G. 2019. Estimating information in time-varying signals. PLoS computational biology. 15(9), e1007290.
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2019 | Journal Article | IST-REx-ID: 7103 | OA
Wang JWJL, Lombardi F, Zhang X, Anaclet C, Ivanov PC. 2019. Non-equilibrium critical dynamics of bursts in θ and δ rhythms as fundamental characteristic of sleep and wake micro-architecture. PLOS Computational Biology. 15(11), e1007268.
View | Files available | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6784 | OA
Ruess J, Pleska M, Guet CC, Tkačik G. 2019. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 15(7), e1007168.
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2019 | Research Data Reference | IST-REx-ID: 9786
Ruess J, Pleska M, Guet CC, Tkačik G. 2019. Supporting text and results, Public Library of Science, 10.1371/journal.pcbi.1007168.s001.
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2018 | Journal Article | IST-REx-ID: 281 | OA
Granados A, Pietsch J, Cepeda Humerez SA, Farquhar I, Tkačik G, Swain P. 2018. Distributed and dynamic intracellular organization of extracellular information. PNAS. 115(23), 6088–6093.
View | Files available | DOI | Download Preprint (ext.) | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 292 | OA
Botella Soler V, Deny S, Martius GS, Marre O, Tkačik G. 2018. Nonlinear decoding of a complex movie from the mammalian retina. PLoS Computational Biology. 14(5), e1006057.
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2018 | Journal Article | IST-REx-ID: 19 | OA
Palmer A, Chait RP, Kishony R. 2018. Nonoptimal gene expression creates latent potential for antibiotic resistance. Molecular Biology and Evolution. 35(11), 2669–2684.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 543 | OA
Chalk MJ, Marre O, Tkačik G. 2018. Toward a unified theory of efficient, predictive, and sparse coding. PNAS. 115(1), 186–191.
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2018 | Research Data | IST-REx-ID: 5584 | OA
Deny S, Marre O, Botella-Soler V, Martius GS, Tkačik G. 2018. Nonlinear decoding of a complex movie from the mammalian retina, IST Austria, 10.15479/AT:ISTA:98.
View | Files available | DOI
 

2018 | Research Data | IST-REx-ID: 5587 | OA
De Martino D, Tkačik G. 2018. Supporting materials ‘STATISTICAL MECHANICS FOR METABOLIC NETWORKS IN STEADY-STATE GROWTH’, IST Austria, 10.15479/AT:ISTA:62.
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