Data and Python scripts supporting Python package FAPS
Ellis T. 2018. Data and Python scripts supporting Python package FAPS, Institute of Science and Technology Austria, 10.15479/AT:ISTA:95.
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IST-2018-95-v1+1_amajus_GPS_2012.csv
122.05 KB
IST-2018-95-v1+2_offspring_SNPs_2012.csv
235.98 KB
IST-2018-95-v1+3_parents_SNPs_2012.csv
311.71 KB
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Abstract
Data and scripts are provided in support of the manuscript "Efficient inference of paternity and sibship inference given known maternity via hierarchical clustering", and the associated Python package FAPS, available from www.github.com/ellisztamas/faps.
Simulation scripts cover:
1. Performance under different mating scenarios.
2. Comparison with Colony2.
3. Effect of changing the number of Monte Carlo draws
The final script covers the analysis of half-sib arrays from wild-pollinated seed in an Antirrhinum majus hybrid zone.
Publishing Year
Date Published
2018-02-12
IST-REx-ID
Cite this
Ellis T. Data and Python scripts supporting Python package FAPS. 2018. doi:10.15479/AT:ISTA:95
Ellis, T. (2018). Data and Python scripts supporting Python package FAPS. Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:95
Ellis, Thomas. “Data and Python Scripts Supporting Python Package FAPS.” Institute of Science and Technology Austria, 2018. https://doi.org/10.15479/AT:ISTA:95.
T. Ellis, “Data and Python scripts supporting Python package FAPS.” Institute of Science and Technology Austria, 2018.
Ellis T. 2018. Data and Python scripts supporting Python package FAPS, Institute of Science and Technology Austria, 10.15479/AT:ISTA:95.
Ellis, Thomas. Data and Python Scripts Supporting Python Package FAPS. Institute of Science and Technology Austria, 2018, doi:10.15479/AT:ISTA:95.
All files available under the following license(s):
Creative Commons Public Domain Dedication (CC0 1.0):
Main File(s)
File Name
IST-2018-95-v1+1_amajus_GPS_2012.csv
122.05 KB
Access Level
Open Access
Date Uploaded
2018-12-12
MD5 Checksum
fc6aab51439f2622ba6df8632e66fd4f
File Name
IST-2018-95-v1+2_offspring_SNPs_2012.csv
235.98 KB
Access Level
Open Access
Date Uploaded
2018-12-12
MD5 Checksum
92347586ae4f8a6eb7c04354797bf314
File Name
IST-2018-95-v1+3_parents_SNPs_2012.csv
311.71 KB
Access Level
Open Access
Date Uploaded
2018-12-12
MD5 Checksum
3300813645a54e6c5c39f41917228354
File Name
IST-2018-95-v1+4_faps_scripts.zip
342.09 KB
Access Level
Open Access
Date Uploaded
2018-12-12
MD5 Checksum
e739fc473567fd8f39438b445fc46147
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