10 Publications

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[10]
2014 | Journal Article | IST-REx-ID: 2042 | OA
Kupczok, Anne, and Jonathan P. Bollback. “Motif Depletion in Bacteriophages Infecting Hosts with CRISPR Systems.” BMC Genomics, vol. 15, no. 1, 663, BioMed Central, 2014, doi:10.1186/1471-2164-15-663.
View | Files available | DOI
 
[9]
2013 | Journal Article | IST-REx-ID: 2410 | OA
Fernandes Redondo, Rodrigo A., et al. “Complete Genome Sequence of the Novel Phage MG-B1 Infecting Bacillus Weihenstephanensis.” Genome Announcements, vol. 1, no. 3, American Society for Microbiology, 2013, doi:10.1128/genomeA.00216-13.
View | Files available | DOI
 
[8]
2013 | Journal Article | IST-REx-ID: 2412 | OA
Kupczok, Anne, and Jonathan P. Bollback. “Probabilistic Models for CRISPR Spacer Content Evolution .” BMC Evolutionary Biology, vol. 13, no. 1, BioMed Central, 2013, pp. 54–54, doi:10.1186/1471-2148-13-54.
View | Files available | DOI
 
[7]
2012 | Journal Article | IST-REx-ID: 2411 | OA
Ebersberger, Ingo, et al. “A Consistent Phylogenetic Backbone for the Fungi.” Molecular Biology and Evolution, vol. 29, no. 5, Oxford University Press, 2012, pp. 1319–34, doi:10.1093/molbev/msr285.
View | Files available | DOI
 
[6]
2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, Anne. “Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods.” Systematic Biology, vol. 60, no. 2, Oxford University Press, 2011, pp. 218–25, doi:10.1093/sysbio/syq086.
View | DOI | Download Submitted Version (ext.)
 
[5]
2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok, Anne. “Split Based Computation of Majority Rule Supertrees.” BMC Evolutionary Biology, vol. 11, no. 205, 205, BioMed Central, 2011, doi:10.1186/1471-2148-11-205.
View | Files available | DOI
 
[4]
2010 | Journal Article | IST-REx-ID: 2409 | OA
Kupczok, Anne, et al. “Accuracy of Phylogeny Reconstruction Methods Combining Overlapping Gene Data Sets .” Algorithms for Molecular Biology, vol. 5, no. 1, 37, BioMed Central, 2010, doi:10.1186/1748-7188-5-37.
View | Files available | DOI
 
[3]
2009 | Journal Article | IST-REx-ID: 3768
Kupczok, Anne, and Arndt Von Haeseler. “Comment on ‘{A} Congruence Index for Testing Topological Similarity between Trees’.” Bioinformatics, vol. 25, no. 1, Oxford University Press, 2009, pp. 147–49, doi:4199.
View | DOI
 
[2]
2008 | Journal Article | IST-REx-ID: 3769
Kupczok, Anne, et al. “An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees.” Journal of Computational Biology, vol. 15, no. 6, Mary Ann Liebert, 2008, pp. 577–91, doi:4200.
View | DOI
 
[1]
2006 | Journal Article | IST-REx-ID: 3767
Kupczok, Anne, and Peter Dittrich. “Determinants of Simulated RNA Evolution.” Journal of Theoretical Biology, vol. 238, no. 3, Elsevier, 2006, pp. 726–35, doi:10.1016/j.jtbi.2005.06.019.
View | DOI
 

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10 Publications

Mark all

[10]
2014 | Journal Article | IST-REx-ID: 2042 | OA
Kupczok, Anne, and Jonathan P. Bollback. “Motif Depletion in Bacteriophages Infecting Hosts with CRISPR Systems.” BMC Genomics, vol. 15, no. 1, 663, BioMed Central, 2014, doi:10.1186/1471-2164-15-663.
View | Files available | DOI
 
[9]
2013 | Journal Article | IST-REx-ID: 2410 | OA
Fernandes Redondo, Rodrigo A., et al. “Complete Genome Sequence of the Novel Phage MG-B1 Infecting Bacillus Weihenstephanensis.” Genome Announcements, vol. 1, no. 3, American Society for Microbiology, 2013, doi:10.1128/genomeA.00216-13.
View | Files available | DOI
 
[8]
2013 | Journal Article | IST-REx-ID: 2412 | OA
Kupczok, Anne, and Jonathan P. Bollback. “Probabilistic Models for CRISPR Spacer Content Evolution .” BMC Evolutionary Biology, vol. 13, no. 1, BioMed Central, 2013, pp. 54–54, doi:10.1186/1471-2148-13-54.
View | Files available | DOI
 
[7]
2012 | Journal Article | IST-REx-ID: 2411 | OA
Ebersberger, Ingo, et al. “A Consistent Phylogenetic Backbone for the Fungi.” Molecular Biology and Evolution, vol. 29, no. 5, Oxford University Press, 2012, pp. 1319–34, doi:10.1093/molbev/msr285.
View | Files available | DOI
 
[6]
2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, Anne. “Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods.” Systematic Biology, vol. 60, no. 2, Oxford University Press, 2011, pp. 218–25, doi:10.1093/sysbio/syq086.
View | DOI | Download Submitted Version (ext.)
 
[5]
2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok, Anne. “Split Based Computation of Majority Rule Supertrees.” BMC Evolutionary Biology, vol. 11, no. 205, 205, BioMed Central, 2011, doi:10.1186/1471-2148-11-205.
View | Files available | DOI
 
[4]
2010 | Journal Article | IST-REx-ID: 2409 | OA
Kupczok, Anne, et al. “Accuracy of Phylogeny Reconstruction Methods Combining Overlapping Gene Data Sets .” Algorithms for Molecular Biology, vol. 5, no. 1, 37, BioMed Central, 2010, doi:10.1186/1748-7188-5-37.
View | Files available | DOI
 
[3]
2009 | Journal Article | IST-REx-ID: 3768
Kupczok, Anne, and Arndt Von Haeseler. “Comment on ‘{A} Congruence Index for Testing Topological Similarity between Trees’.” Bioinformatics, vol. 25, no. 1, Oxford University Press, 2009, pp. 147–49, doi:4199.
View | DOI
 
[2]
2008 | Journal Article | IST-REx-ID: 3769
Kupczok, Anne, et al. “An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees.” Journal of Computational Biology, vol. 15, no. 6, Mary Ann Liebert, 2008, pp. 577–91, doi:4200.
View | DOI
 
[1]
2006 | Journal Article | IST-REx-ID: 3767
Kupczok, Anne, and Peter Dittrich. “Determinants of Simulated RNA Evolution.” Journal of Theoretical Biology, vol. 238, no. 3, Elsevier, 2006, pp. 726–35, doi:10.1016/j.jtbi.2005.06.019.
View | DOI
 

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