Anne Kupczok

Bollback Group

10 Publications

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[10]
2014 | Journal Article | IST-REx-ID: 2042 | OA
Kupczok A, Bollback JP. 2014. Motif depletion in bacteriophages infecting hosts with CRISPR systems. BMC Genomics. 15(1), 663.
[Published Version] View | Files available | DOI
 
[9]
2013 | Journal Article | IST-REx-ID: 2412 | OA
Kupczok A, Bollback JP. 2013. Probabilistic models for CRISPR spacer content evolution . BMC Evolutionary Biology. 13(1), 54–54.
[Published Version] View | Files available | DOI
 
[8]
2013 | Journal Article | IST-REx-ID: 2410 | OA
Fernandes Redondo RA, Kupczok A, Stift G, Bollback JP. 2013. Complete genome sequence of the novel phage MG-B1 infecting bacillus weihenstephanensis. Genome Announcements. 1(3).
[Published Version] View | Files available | DOI
 
[7]
2012 | Journal Article | IST-REx-ID: 2411 | OA
Ebersberger I, De Matos Simoes R, Kupczok A, Gube M, Kothe E, Voigt K, Von Haeseler A. 2012. A consistent phylogenetic backbone for the fungi. Molecular Biology and Evolution. 29(5), 1319–1334.
[Published Version] View | Files available | DOI
 
[6]
2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok A. 2011. Consequences of different null models on the tree shape bias of supertree methods. Systematic Biology. 60(2), 218–225.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[5]
2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok A. 2011. Split based computation of majority rule supertrees. BMC Evolutionary Biology. 11(205), 205.
[Published Version] View | Files available | DOI
 
[4]
2010 | Journal Article | IST-REx-ID: 2409 | OA
Kupczok A, Schmidt H, Von Haeseler A. 2010. Accuracy of phylogeny reconstruction methods combining overlapping gene data sets . Algorithms for Molecular Biology. 5(1), 37.
[Published Version] View | Files available | DOI
 
[3]
2009 | Journal Article | IST-REx-ID: 3768
Kupczok A, Von Haeseler A. 2009. Comment on ‘{A} congruence index for testing topological similarity between trees’. Bioinformatics. 25(1), 147–149.
View | DOI
 
[2]
2008 | Journal Article | IST-REx-ID: 3769
Kupczok A, Von Haeseler A, Klaere S. 2008. An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees. Journal of Computational Biology. 15(6), 577–591.
View | DOI
 
[1]
2006 | Journal Article | IST-REx-ID: 3767
Kupczok A, Dittrich P. 2006. Determinants of simulated RNA evolution. Journal of Theoretical Biology. 238(3), 726–35.
View | DOI
 
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10 Publications

Mark all

[10]
2014 | Journal Article | IST-REx-ID: 2042 | OA
Kupczok A, Bollback JP. 2014. Motif depletion in bacteriophages infecting hosts with CRISPR systems. BMC Genomics. 15(1), 663.
[Published Version] View | Files available | DOI
 
[9]
2013 | Journal Article | IST-REx-ID: 2412 | OA
Kupczok A, Bollback JP. 2013. Probabilistic models for CRISPR spacer content evolution . BMC Evolutionary Biology. 13(1), 54–54.
[Published Version] View | Files available | DOI
 
[8]
2013 | Journal Article | IST-REx-ID: 2410 | OA
Fernandes Redondo RA, Kupczok A, Stift G, Bollback JP. 2013. Complete genome sequence of the novel phage MG-B1 infecting bacillus weihenstephanensis. Genome Announcements. 1(3).
[Published Version] View | Files available | DOI
 
[7]
2012 | Journal Article | IST-REx-ID: 2411 | OA
Ebersberger I, De Matos Simoes R, Kupczok A, Gube M, Kothe E, Voigt K, Von Haeseler A. 2012. A consistent phylogenetic backbone for the fungi. Molecular Biology and Evolution. 29(5), 1319–1334.
[Published Version] View | Files available | DOI
 
[6]
2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok A. 2011. Consequences of different null models on the tree shape bias of supertree methods. Systematic Biology. 60(2), 218–225.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[5]
2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok A. 2011. Split based computation of majority rule supertrees. BMC Evolutionary Biology. 11(205), 205.
[Published Version] View | Files available | DOI
 
[4]
2010 | Journal Article | IST-REx-ID: 2409 | OA
Kupczok A, Schmidt H, Von Haeseler A. 2010. Accuracy of phylogeny reconstruction methods combining overlapping gene data sets . Algorithms for Molecular Biology. 5(1), 37.
[Published Version] View | Files available | DOI
 
[3]
2009 | Journal Article | IST-REx-ID: 3768
Kupczok A, Von Haeseler A. 2009. Comment on ‘{A} congruence index for testing topological similarity between trees’. Bioinformatics. 25(1), 147–149.
View | DOI
 
[2]
2008 | Journal Article | IST-REx-ID: 3769
Kupczok A, Von Haeseler A, Klaere S. 2008. An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees. Journal of Computational Biology. 15(6), 577–591.
View | DOI
 
[1]
2006 | Journal Article | IST-REx-ID: 3767
Kupczok A, Dittrich P. 2006. Determinants of simulated RNA evolution. Journal of Theoretical Biology. 238(3), 726–35.
View | DOI
 
Marked Publication(s)

Search

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    Citation Style: ISTA Annual Report

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