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Marjon de Vos

S. Andreas Angermayr

Marta Lukacisinova

Qin Qi

Karin Mitosch

Martin Lukacisin

Guillaume Chevereau

Julia Tischler

Mark Bollenbach



28 Publications

2019 | Journal Article | IST-REx-ID: 7026   OA
Emergent gene expression responses to drug combinations predict higher-order drug interactions
M. Lukacisin, T. Bollenbach, Cell Systems 9 (2019) 423-433.e1-e3.
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2019 | Thesis | IST-REx-ID: 6392
Quantitative investigation of gene expression principles through combinatorial drug perturbation and theory
M. Lukacisin, Quantitative Investigation of Gene Expression Principles through Combinatorial Drug Perturbation and Theory, IST Austria, 2019.
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2018 | Thesis | IST-REx-ID: 6263   OA
Genetic determinants of antibiotic resistance evolution
M. Lukacisinova, Genetic Determinants of Antibiotic Resistance Evolution, IST Austria, 2018.
View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 1027
Toward a quantitative understanding of antibiotic resistance evolution
M. Lukacisinova, M.T. Bollenbach, Current Opinion in Biotechnology 46 (2017) 90–97.
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2017 | Journal Article | IST-REx-ID: 822   OA
Interaction networks, ecological stability, and collective antibiotic tolerance in polymicrobial infections
M. De Vos, M.P. Zagórski, A. Mcnally, M.T. Bollenbach, PNAS 114 (2017) 10666–10671.
View | DOI | Download (ext.) | PubMed | Europe PMC
 
2017 | Journal Article | IST-REx-ID: 520
Nonhierarchical flux regulation exposes the fitness burden associated with lactate production in Synechocystis sp. PCC6803
W. Du, A. Angermayr, J. Jongbloets, D. Molenaar, H. Bachmann, K. Hellingwerf, F. Branco Dos Santos, ACS Synthetic Biology 6 (2017) 395–401.
View | DOI | PubMed | Europe PMC
 
2017 | Journal Article | IST-REx-ID: 1029
Sequence-specific thermodynamic properties of nucleic acids influence both transcriptional pausing and backtracking in yeast
M. Lukacisin, M. Landon, R. Jajoo, PLoS One 12 (2017).
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2017 | Journal Article | IST-REx-ID: 696
Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes
M. Lukacisinova, S. Novak, T. Paixao, PLoS Computational Biology 13 (2017).
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2017 | Thesis | IST-REx-ID: 818
Timing, variability and cross-protection in bacteria – insights from dynamic gene expression responses to antibiotics
K. Mitosch, Timing, Variability and Cross-Protection in Bacteria – Insights from Dynamic Gene Expression Responses to Antibiotics, IST Austria, 2017.
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2017 | Journal Article | IST-REx-ID: 666   OA
Noisy response to antibiotic stress predicts subsequent single cell survival in an acidic environment
K. Mitosch, G. Rieckh, T. Bollenbach, Cell Systems 4 (2017) 393–403.
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2016 | Journal Article | IST-REx-ID: 1154   OA
A microfluidic device for measuring cell migration towards substrate bound and soluble chemokine gradients
J. Schwarz, V. Bierbaum, J. Merrin, T. Frank, R. Hauschild, M.T. Bollenbach, S. Tay, M.K. Sixt, M. Mehling, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1218   OA
Culturing synechocystis sp. Strain pcc 6803 with N2 and CO2 in a diel regime reveals multiphase glycogen dynamics with low maintenance costs
A. Angermayr, P. Van Alphen, D. Hasdemir, G. Kramer, M. Iqbal, W. Van Grondelle, H. Hoefsloot, Y. Choi, K. Hellingwerf, Applied and Environmental Microbiology 82 (2016) 4180–4189.
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2016 | Journal Article | IST-REx-ID: 1552   OA
The genomic basis of adaptation to the fitness cost of rifampicin resistance in Pseudomonas aeruginosa
Q. Qi, M. Toll Riera, K. Heilbron, G. Preston, R.C. Maclean, Proceedings of the Royal Society of London Series B Biological Sciences 283 (2016).
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2015 | Journal Article | IST-REx-ID: 1623   OA
Single-cell screening of photosynthetic growth and lactate production by cyanobacteria
P. Hammar, A. Angermayr, S. Sjostrom, J. Van Der Meer, K. Hellingwerf, E. Hudson, H. Joensson, Biotechnology for Biofuels 8 (2015).
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2015 | Journal Article | IST-REx-ID: 1509   OA
Embryo-lethal phenotypes in early abp1 mutants are due to disruption of the neighboring BSM gene
J. Michalko, M. Dravecka, T. Bollenbach, J. Friml, F1000 Research 4 (2015).
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2015 | Journal Article | IST-REx-ID: 1586
Metabolic engineering of cyanobacteria for the synthesis of commodity products
A. Angermayr, A. Gorchs, K. Hellingwerf, Trends in Biotechnology 33 (2015) 352–361.
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2015 | Journal Article | IST-REx-ID: 1810   OA
Antimicrobial interactions: Mechanisms and implications for drug discovery and resistance evolution
M.T. Bollenbach, Current Opinion in Microbiology 27 (2015) 1–9.
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2015 | Journal Article | IST-REx-ID: 1823   OA
Systematic discovery of drug interaction mechanisms
G. Chevereau, M.T. Bollenbach, Molecular Systems Biology 11 (2015).
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2015 | Journal Article | IST-REx-ID: 1619
Quantifying the determinants of evolutionary dynamics leading to drug resistance
G. Chevereau, M. Dravecka, T. Batur, A. Guvenek, D. Ayhan, E. Toprak, M.T. Bollenbach, PLoS Biology 13 (2015).
View | Files available | DOI
 
2015 | Journal Article | IST-REx-ID: 1571
Breaking evolutionary constraint with a tradeoff ratchet
M. De Vos, A. Dawid, V. Šunderlíková, S. Tans, PNAS 112 (2015) 14906–14911.
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