Amberg, Nicole, Florian Pauler, Carmen Streicher, and Simon Hippenmeyer. “Tissue-Wide Genetic and Cellular Landscape Shapes the Execution of Sequential PR Functions in Neural Stem Cell Lineage Progression.”https://doi.org/10.1126/sciadv.abq1263__Science Advances. American Association for the Advancement of Science, 2022.https://doi.org/10.1126/sciadv.abq1263 .
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Assen, Frank P, Jun Abe, Miroslav Hons, Robert Hauschild, Shayan Shamipour, Walter Kaufmann, Tommaso Costanzo, et al. “Multitier Mechanics Control Stromal Adaptations in Swelling Lymph Nodes.”https://doi.org/10.1038/s41590-022-01257-4__Nature Immunology. Springer Nature, 2022.https://doi.org/10.1038/s41590-022-01257-4 .
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Cheung, Giselle T, Danijela Bataveljic, Josien Visser, Naresh Kumar, Julien Moulard, Glenn Dallérac, Daria Mozheiko, et al. “Physiological Synaptic Activity and Recognition Memory Require Astroglial Glutamine.”https://doi.org/10.1038/s41467-022-28331-7__Nature Communications. Springer Nature, 2022.https://doi.org/10.1038/s41467-022-28331-7 .
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Schaaf, Zachary A., Lyvin Tat, Noemi Cannizzaro, Ralph Green, Thomas Rülicke, Simon Hippenmeyer, and Konstantinos S. Zarbalis. “WDF Mutation Alters Laminar Position and Morphology of Cortical Neurons.”https://doi.org/10.1186/s13229-022-00508-3__Molecular Autism. Springer Nature, 2022.https://doi.org/10.1186/s13229-022-00508-3 .
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Anderson, Donovan J., Florian Pauler, Aaron Mckenna, Jay Shendure, Simon Hippenmeyer, and Marshall S. Horwitz. “Simultaneous Brain Cell Type and Lineage Determined by ScRNA-Seq Reveals Stereotyped Cortical Development.”https://doi.org/10.1016/j.cels.2022.03.006__Cell Systems. Elsevier, 2022.https://doi.org/10.1016/j.cels.2022.03.006 .
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Atherton, Joseph, Melissa A Stouffer, Fiona Francis, and Carolyn A. Moores. “Visualising the Cytoskeletal Machinery in Neuronal Growth Cones Using Cryo-Electron Tomography.”https://doi.org/10.1242/jcs.259234__Journal of Cell Science. The Company of Biologists, 2022.https://doi.org/10.1242/jcs.259234 .
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Amberg, Nicole, Melissa A Stouffer, and Irene Vercellino. “Operation STEM Fatale – How an Equity, Diversity and Inclusion Initiative Has Brought Us to Reflect on the Current Challenges in Cell Biology and Science as a Whole.”https://doi.org/10.1242/jcs.260017__Journal of Cell Science. The Company of Biologists, 2022.https://doi.org/10.1242/jcs.260017 .
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Schaaf, Zachary, Lyvin Tat, Noemi Cannizzaro, Ralph Green, Thomas Rülicke, Simon Hippenmeyer, and K Zarbalis. “WDF Cell Autonomously Controls Neuronal Migration.”https://doi.org/10.21203/rs.3.rs-1316167/v1__Research Square, n.d.https://doi.org/10.21203/rs.3.rs-1316167/v1 .
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Hansen, Andi H, Florian Pauler, Michael Riedl, Carmen Streicher, Anna-Magdalena Heger, Susanne Laukoter, Christoph M Sommer, et al. “Tissue-Wide Effects Override Cell-Intrinsic Gene Function in Radial Neuron Migration.”https://doi.org/10.1093/oons/kvac009__Oxford Open Neuroscience. Oxford Academic, 2022.https://doi.org/10.1093/oons/kvac009 .
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Anderson, Donovan J., Florian Pauler, Aaron McKenna, Jay Shendure, Simon Hippenmeyer, and Marshall S. Horwitz. “Simultaneous Identification of Brain Cell Type and Lineage via Single Cell RNA Sequencing.”https://doi.org/10.1101/2020.12.31.425016__BioRxiv. Cold Spring Harbor Laboratory, n.d.https://doi.org/10.1101/2020.12.31.425016 .
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Samarasinghe, Ranmal A., Osvaldo Miranda, Jessie E. Buth, Simon Mitchell, Isabella Ferando, Momoko Watanabe, Arinnae Kurdian, et al. Identification of Neural Oscillations and Epileptiform Changes in Human Brain Organoids. Vol. 24. Springer Nature, 2021.https://doi.org/10.1038/s41593-021-00906-5 .
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Zhang, Tingting, Tengyuan Liu, Natalia Mora, Justine Guegan, Mathilde Bertrand, Ximena Contreras, Andi H Hansen, et al. “Generation of Excitatory and Inhibitory Neurons from Common Progenitors via Notch Signaling in the Cerebellum.”https://doi.org/10.1016/j.celrep.2021.109208__Cell Reports. Elsevier, 2021.https://doi.org/10.1016/j.celrep.2021.109208 .
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Pauler, Florian, Quanah Hudson, Susanne Laukoter, and Simon Hippenmeyer. “Inducible Uniparental Chromosome Disomy to Probe Genomic Imprinting at Single-Cell Level in Brain and Beyond.”https://doi.org/10.1016/j.neuint.2021.104986__Neurochemistry International. Elsevier, 2021.https://doi.org/10.1016/j.neuint.2021.104986 .
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Santini, Laura, Florian Halbritter, Fabian Titz-Teixeira, Toru Suzuki, Maki Asami, Xiaoyan Ma, Julia Ramesmayer, et al. “Genomic Imprinting in Mouse Blastocysts Is Predominantly Associated with K27me3.”https://doi.org/10.1038/s41467-021-23510-4__Nature Communications. Springer Nature, 2021.https://doi.org/10.1038/s41467-021-23510-4 .
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Contreras, Ximena, Nicole Amberg, Amarbayasgalan Davaatseren, Andi H Hansen, Johanna Sonntag, Lill Andersen, Tina Bernthaler, et al. “A Genome-Wide Library of MADM Mice for Single-Cell Genetic Mosaic Analysis.”https://doi.org/10.1016/j.celrep.2021.109274__Cell Reports. Cell Press, 2021.https://doi.org/10.1016/j.celrep.2021.109274 .
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Yotova, Iveta, Quanah J. Hudson, Florian Pauler, Katharina Proestling, Isabella Haslinger, Lorenz Kuessel, Alexandra Perricos, Heinrich Husslein, and René Wenzl. “LIN133 Inhibits Invasion and Promotes Proliferation in an Endometriosis Epithelial Cell Line.”https://doi.org/10.3390/ijms22168385__International Journal of Molecular Sciences. MDPI, 2021.https://doi.org/10.3390/ijms22168385 .
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Hanganu-Opatz, Ileana L., Simon J. B. Butt, Simon Hippenmeyer, Natalia V. De Marco García, Jessica A. Cardin, Bradley Voytek, and Alysson R. Muotri. “The Logic of Developing Neocortical Circuits in Health and Disease.”https://doi.org/10.1523/jneurosci.1655-20.2020__The Journal of Neuroscience. Society for Neuroscience, 2021.https://doi.org/10.1523/jneurosci.1655-20.2020 .
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Baldwin, Katherine T., Christabel X. Tan, Samuel T. Strader, Changyu Jiang, Justin T. Savage, Xabier Elorza-Vidal, Ximena Contreras, et al. “HepaCAM Controls Astrocyte Self-Organization and Coupling.”https://doi.org/10.1016/j.neuron.2021.05.025__Neuron. Elsevier, 2021.https://doi.org/10.1016/j.neuron.2021.05.025 .
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Maes, Margaret E, Gabriele M. Wögenstein, Gloria Colombo, Raquel Casado Polanco, and Sandra Siegert. “Optimizing AA/6 Microglial Targeting Identified Enhanced Efficiency in the Photoreceptor Degenerative Environment.”https://doi.org/10.1016/j.omtm.2021.09.006__Molecular Therapy - Methods and Clinical Development. Elsevier, 2021.https://doi.org/10.1016/j.omtm.2021.09.006 .
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Amberg, Nicole, and Simon Hippenmeyer. “Genetic Mosaic Dissection of Candidate Genes in Mice Using Mosaic Analysis with Double Markers.”https://doi.org/10.1016/j.xpro.2021.100939__STAR Protocols. Cell Press, 2021.https://doi.org/10.1016/j.xpro.2021.100939 .
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Takeo, Yukari H., S. Andrew Shuster, Linnie Jiang, Miley Hu, David J. Luginbuhl, Thomas Rülicke, Ximena Contreras, et al. “Glu- and Cbln1-Mediated Competitive Synaptogenesis Shapes the Dendritic Arbors of Cerebellar Purkinje Cells.”https://doi.org/10.1016/j.neuron.2020.11.028__Neuron. Elsevier, 2021.https://doi.org/10.1016/j.neuron.2020.11.028 .
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Hansen, Andi H. “Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects in Radial Projection Neuron Migration.”https://doi.org/10.15479/at:ista:9962__Institute of Science and Technology Austria, 2021.https://doi.org/10.15479/at:ista:9962 .
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Beattie, Robert J, Simon Hippenmeyer, and Florian Pauler. “SCOPES: Sparking Curiosity through Open-Source Platforms in Education and Science.”https://doi.org/10.3389/feduc.2020.00048__Frontiers in Education. Frontiers Media, 2020.https://doi.org/10.3389/feduc.2020.00048 .
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Gao, Xiaofei, Jun-Liszt Li, Xingjun Chen, Bo Ci, Fei Chen, Nannan Lu, Bo Shen, et al. “Reduction of Neuronal Activity Mediated by Blood-Vessel Regression in the Brain.”https://doi.org/10.1101/2020.09.15.262782__BioRxiv. Cold Spring Harbor Laboratory, n.d.https://doi.org/10.1101/2020.09.15.262782 .
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Laukoter, Susanne, Nicole Amberg, Florian Pauler, and Simon Hippenmeyer. “Generation and Isolation of Single Cells from Mouse Brain with Mosaic Analysis with Double Markers-Induced Uniparental Chromosome Disomy.”https://doi.org/10.1016/j.xpro.2020.100215__STAR Protocols. Elsevier, 2020.https://doi.org/10.1016/j.xpro.2020.100215 .
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Laukoter, Susanne, Robert J Beattie, Florian Pauler, Nicole Amberg, Keiichi I. Nakayama, and Simon Hippenmeyer. “Imprinted Cdkn1c Genomic Locus Cell-Autonomously Promotes Cell Survival in Cerebral Cortex Development.”https://doi.org/10.1038/s41467-019-14077-2__Nature Communications. Springer Nature, 2020.https://doi.org/10.1038/s41467-019-14077-2 .
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Moon, Hyang Mi, Simon Hippenmeyer, Liqun Luo, and Anthony Wynshaw-Boris. “LI Determines Cleavage Plane Positioning by Regulating Actomyosin-Mediated Cell Membrane Contractility.”https://doi.org/10.7554/elife.51512__ELife. eLife Sciences Publications, 2020.https://doi.org/10.7554/elife.51512 .
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Hippe, Andreas, Stephan Alexander Braun, Péter Oláh, Peter Arne Gerber, Anne Schorr, Stephan Seeliger, Stephanie Holtz, et al. “EGFR/Ras-Induced CCL20 Production Modulates the Tumour Microenvironment.”https://doi.org/10.1038/s41416-020-0943-2__British Journal of Cancer. Springer Nature, 2020.https://doi.org/10.1038/s41416-020-0943-2 .
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Laukoter, Susanne, Florian Pauler, Robert J Beattie, Nicole Amberg, Andi H Hansen, Carmen Streicher, Thomas Penz, Christoph Bock, and Simon Hippenmeyer. “Cell-Type Specificity of Genomic Imprinting in Cerebral Cortex.”https://doi.org/10.1016/j.neuron.2020.06.031__Neuron. Elsevier, 2020.https://doi.org/10.1016/j.neuron.2020.06.031 .
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Tian, Anhao, Bo Kang, Baizhou Li, Biying Qiu, Wenhong Jiang, Fangjie Shao, Qingqing Gao, et al. “Oncogenic State and Cell Identity Combinatorially Dictate the Susceptibility of Cells within Glioma Development Hierarchy to IGR Targeting.”https://doi.org/10.1002/advs.202001724__Advanced Science. Wiley, 2020.https://doi.org/10.1002/advs.202001724 .
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Zhang, Xuying, Christine V. Mennicke, Guanxi Xiao, Robert J Beattie, Mansoor Haider, Simon Hippenmeyer, and H. Troy Ghashghaei. “Clonal Analysis of Gliogenesis in the Cerebral Cortex Reveals Stochastic Expansion of Glia and Cell Autonomous Responses to Egfr Dosage.”https://doi.org/10.3390/cells9122662__Cells. MDPI, 2020.https://doi.org/10.3390/cells9122662 .
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Santini, Laura, Florian Halbritter, Fabian Titz-Teixeira, Toru Suzuki, Maki Asami, Julia Ramesmayer, Xiaoyan Ma, et al. “Novel Imprints in Mouse Blastocysts Are Predominantly DNA Methylation Independent.”https://doi.org/10.1101/2020.11.03.366948__BioRxiv. Cold Spring Harbor Laboratory, n.d.https://doi.org/10.1101/2020.11.03.366948 .
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Hansen, Andi H, and Simon Hippenmeyer. “Non-Cell-Autonomous Mechanisms in Radial Projection Neuron Migration in the Developing Cerebral Cortex.”https://doi.org/10.3389/fcell.2020.574382__Frontiers in Cell and Developmental Biology. Frontiers, 2020.https://doi.org/10.3389/fcell.2020.574382 .
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Beattie, Robert J, Carmen Streicher, Nicole Amberg, Giselle T Cheung, Ximena Contreras, Andi H Hansen, and Simon Hippenmeyer. “Lineage Tracing and Clonal Analysis in Developing Cerebral Cortex Using Mosaic Analysis with Double Markers (MADM).”https://doi.org/10.3791/61147__Journal of Visual Experiments. MyJove Corporation, 2020.https://doi.org/10.3791/61147 .
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Contreras, Ximena. “Genetic Dissection of Neural Development in Health and Disease at Single Cell Resolution.”https://doi.org/10.15479/AT:ISTA:7902__Institute of Science and Technology Austria, 2020.https://doi.org/10.15479/AT:ISTA:7902 .
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Henderson, Nathan T., Sylvain J. Le Marchand, Martin Hruska, Simon Hippenmeyer, Liqun Luo, and Matthew B. Dalva. “Ephrin- Controls Excitatory Synapse Density through Cell-Cell Competition for EphBs.”https://doi.org/10.7554/eLife.41563__ELife. eLife Sciences Publications, 2019.https://doi.org/10.7554/eLife.41563 .
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Picco, Noemi, Simon Hippenmeyer, Julio Rodarte, Carmen Streicher, Zoltán Molnár, Philip K. Maini, and Thomas E. Woolley. “A Mathematical Insight into Cell Labelling Experiments for Clonal Analysis.”https://doi.org/10.1111/joa.13001__Journal of Anatomy. Wiley, 2019.https://doi.org/10.1111/joa.13001 .
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Cheung, Giselle T, and Michael A. Cousin. “Synaptic Vesicle Generation from Activitydependent Bulk Endosomes Requires a Dephosphorylationdependent Dynamin–Syndapin Interaction.”https://doi.org/10.1111/jnc.14862__Journal of Neurochemistry. Wiley, 2019.https://doi.org/10.1111/jnc.14862 .
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Telley, L, G Agirman, J Prados, Nicole Amberg, S Fièvre, P Oberst, G Bartolini, et al. “Temporal Patterning of Apical Progenitors and Their Daughter Neurons in the Developing Neocortex.”https://doi.org/10.1126/science.aav2522__Science. AAAS, 2019.https://doi.org/10.1126/science.aav2522 .
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Ortiz-Álvarez, G, M Daclin, A Shihavuddin, P Lansade, A Fortoul, M Faucourt, S Clavreul, et al. “Adult Neural Stem Cells and Multiciliated Ependymal Cells Share a Common Lineage Regulated by the Geminin Family Members.”https://doi.org/10.1016/j.neuron.2019.01.051__Neuron. Elsevier, 2019.https://doi.org/10.1016/j.neuron.2019.01.051 .
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Llorca, Alfredo, Gabriele Ciceri, Robert J Beattie, Fong Kuan Wong, Giovanni Diana, Eleni Serafeimidou-Pouliou, Marian Fernández-Otero, et al. “A Stochastic Framework of Neurogenesis Underlies the Assembly of Neocortical Cytoarchitecture.”https://doi.org/10.7554/eLife.51381__ELife. eLife Sciences Publications, 2019.https://doi.org/10.7554/eLife.51381 .
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Amberg, Nicole, Panagiota A. Sotiropoulou, Gerwin Heller, Beate M. Lichtenberger, Martin Holcmann, Bahar Camurdanoglu, Temenuschka Baykuscheva-Gentscheva, Cedric Blanpain, and Maria Sibilia. “EGFR Controls Hair Shaft Differentiation in a -Independent Manner.”https://doi.org/10.1016/j.isci.2019.04.018__IScience. Elsevier, 2019.https://doi.org/10.1016/j.isci.2019.04.018 .
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Amberg, Nicole, Susanne Laukoter, and Simon Hippenmeyer. “Epigenetic Cues Modulating the Generation of Cell Type Diversity in the Cerebral Cortex.”https://doi.org/10.1111/jnc.14601__Journal of Neurochemistry. Wiley, 2019.https://doi.org/10.1111/jnc.14601 .
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Andergassen, Daniel, Markus Muckenhuber, Philipp C. Bammer, Tomasz M. Kulinski, Hans-Christian Theussl, Takahiko Shimizu, Josef M. Penninger, Florian Pauler, and Quanah J. Hudson. “The Airn LncRNA Does Not Require Any DNA Elements within Its Locus to Silence Distant Imprinted Genes.”https://doi.org/10.1371/journal.pgen.1008268__PLoS Genetics. Public Library of Science, 2019.https://doi.org/10.1371/journal.pgen.1008268 .
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Contreras, Ximena, and Simon Hippenmeyer. “Memo1 Tiles the Radial Glial Cell Grid.”https://doi.org/10.1016/j.neuron.2019.08.021__Neuron. Elsevier, 2019.https://doi.org/10.1016/j.neuron.2019.08.021 .
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Llorca, Alfredo, Gabriele Ciceri, Robert J Beattie, Fong K. Wong, Giovanni Diana, Eleni Serafeimidou, Marian Fernández-Otero, et al. “Heterogeneous Progenitor Cell Behaviors Underlie the Assembly of Neocortical Cytoarchitecture.”https://doi.org/10.1101/494088__BioRxiv. Cold Spring Harbor Laboratory, n.d.https://doi.org/10.1101/494088 .
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Higareda Almaraz, Juan, Michael Karbiener, Maude Giroud, Florian Pauler, Teresa Gerhalter, Stephan Herzig, and Marcel Scheideler. “Norepinephrine Triggers an Immediate-Early Regulatory Network Response in Primary Human White Adipocytes.”https://doi.org/10.1186/s12864-018-5173-0__BMC Genomics. BioMed Central, 2018.https://doi.org/10.1186/s12864-018-5173-0 .
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Higareda Almaraz, Juan, Michael Karbiener, Maude Giroud, Florian Pauler, Teresa Gerhalter, Stephan Herzig, and Marcel Scheideler. “Additional File 1: Of Norepinephrine Triggers an Immediate-Early Regulatory Network Response in Primary Human White Adipocytes.”https://doi.org/10.6084/m9.figshare.7295339.v1__Springer Nature, 2018.https://doi.org/10.6084/m9.figshare.7295339.v1 .
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Higareda Almaraz, Juan, Michael Karbiener, Maude Giroud, Florian Pauler, Teresa Gerhalter, Stephan Herzig, and Marcel Scheideler. “Additional File 3: Of Norepinephrine Triggers an Immediate-Early Regulatory Network Response in Primary Human White Adipocytes.”https://doi.org/10.6084/m9.figshare.7295369.v1__Springer Nature, 2018.https://doi.org/10.6084/m9.figshare.7295369.v1 .
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Laukoter, Susanne. “Role of Genomic Imprinting in Cerebral Cortex Development.”https://doi.org/10.15479/AT:ISTA:th1057__Institute of Science and Technology Austria, 2018.https://doi.org/10.15479/AT:ISTA:th1057 .
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