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87 Publications
2024 | Journal Article | IST-REx-ID: 14979 | 
J. Datler et al., “Multi-modal cryo-EM reveals trimers of protein A10 to form the palisade layer in poxvirus cores,” Nature Structural & Molecular Biology. Springer Nature, 2024.
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2024 | Thesis | IST-REx-ID: 15020 |
M. Hledik, “Genetic information and biological optimization,” Institute of Science and Technology Austria, 2024.
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2024 | Journal Article | IST-REx-ID: 15146 |
B. Zens et al., “Lift-out cryo-FIBSEM and cryo-ET reveal the ultrastructural landscape of extracellular matrix,” Journal of Cell Biology, vol. 223, no. 6. Rockefeller University Press, 2024.
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2024 | Journal Article | IST-REx-ID: 15323
I. Vercellino and L. A. Sazanov, “SCAF1 drives the compositional diversity of mammalian respirasomes,” Nature Structural and Molecular Biology. Springer Nature, 2024.
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2024 | Journal Article | IST-REx-ID: 15313 |
L. N. Agasthya and C. J. Muller, “Dynamics and scaling of internally cooled convection,” Communications in Nonlinear Science and Numerical Simulation, vol. 134. Elsevier, 2024.
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2023 | Conference Paper | IST-REx-ID: 13053 |
E.-A. Peste, A. Vladu, E. Kurtic, C. Lampert, and D.-A. Alistarh, “CrAM: A Compression-Aware Minimizer,” in 11th International Conference on Learning Representations , Kigali, Rwanda .
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2023 | Thesis | IST-REx-ID: 13074 |
E.-A. Peste, “Efficiency and generalization of sparse neural networks,” Institute of Science and Technology Austria, 2023.
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2023 | Thesis | IST-REx-ID: 12732 |
P. Brighi, “Ergodicity breaking in disordered and kinetically constrained quantum many-body systems,” Institute of Science and Technology Austria, 2023.
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2023 | Journal Article | IST-REx-ID: 14341
D. Scarselli, J. M. Lopez Alonso, A. Varshney, and B. Hof, “Turbulence suppression by cardiac-cycle-inspired driving of pipe flow,” Nature, vol. 621, no. 7977. Springer Nature, pp. 71–74, 2023.
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2023 | Journal Article | IST-REx-ID: 12349 |
D. Gupta, W. F. Mlynarski, A. L. Sumser, O. Symonova, J. Svaton, and M. A. Jösch, “Panoramic visual statistics shape retina-wide organization of receptive fields,” Nature Neuroscience, vol. 26. Springer Nature, pp. 606–614, 2023.
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2023 | Research Data | IST-REx-ID: 12370 |
D. Gupta, A. L. Sumser, and M. A. Jösch, “Research Data for: Panoramic visual statistics shape retina-wide organization of receptive fields.” Institute of Science and Technology Austria, 2023.
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2023 | Conference Paper | IST-REx-ID: 14461 |
I. Markov, A. Vladu, Q. Guo, and D.-A. Alistarh, “Quantized distributed training of large models with convergence guarantees,” in Proceedings of the 40th International Conference on Machine Learning, Honolulu, Hawaii, HI, United States, 2023, vol. 202, pp. 24020–24044.
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2023 | Conference Paper | IST-REx-ID: 14458 |
E. Frantar and D.-A. Alistarh, “SparseGPT: Massive language models can be accurately pruned in one-shot,” in Proceedings of the 40th International Conference on Machine Learning, Honolulu, Hawaii, HI, United States, 2023, vol. 202, pp. 10323–10337.
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2023 | Journal Article | IST-REx-ID: 12334 |
F. Fäßler et al., “ArpC5 isoforms regulate Arp2/3 complex–dependent protrusion through differential Ena/VASP positioning,” Science Advances, vol. 9, no. 3. American Association for the Advancement of Science, 2023.
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2023 | Research Data | IST-REx-ID: 14562 |
F. K. Schur, “Research data of the publication ‘ArpC5 isoforms regulate Arp2/3 complex-dependent protrusion through differential Ena/VASP positioning.’” Institute of Science and Technology Austria, 2023.
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2023 | Journal Article | IST-REx-ID: 14040 |
Z. Zhao et al., “The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis,” Nature Communications, vol. 14. Springer Nature, 2023.
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2023 | Journal Article | IST-REx-ID: 14077 |
G. Puixeu Sala, A. Macon, and B. Vicoso, “Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster,” G3: Genes, Genomes, Genetics, vol. 13, no. 8. Oxford University Press, 2023.
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2023 | Thesis | IST-REx-ID: 14651 |
L. S. Arathoon, “Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus,” Institute of Science and Technology Austria, 2023.
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2023 | Journal Article | IST-REx-ID: 14240 |
S. Jeschke and C. Wojtan, “Generalizing shallow water simulations with dispersive surface waves,” ACM Transactions on Graphics, vol. 42, no. 4. Association for Computing Machinery, 2023.
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2023 | Research Data | IST-REx-ID: 12817 |
J. G. Danzl, “Research data for the publication ‘Dense 4D nanoscale reconstruction of living brain tissue.’” Institute of Science and Technology Austria, 2023.
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2023 | Journal Article | IST-REx-ID: 13267 |
P. Velicky et al., “Dense 4D nanoscale reconstruction of living brain tissue,” Nature Methods, vol. 20. Springer Nature, pp. 1256–1265, 2023.
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2023 | Research Data | IST-REx-ID: 13126 |
J. G. Danzl, “Research data for the publication ‘Imaging brain tissue architecture across millimeter to nanometer scales.’” Institute of Science and Technology Austria, 2023.
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2023 | Journal Article | IST-REx-ID: 14613 |
C. Lasne, M. N. Elkrewi, M. A. Toups, L. A. Layana Franco, A. Macon, and B. Vicoso, “The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome,” Molecular Biology and Evolution, vol. 40, no. 12. Oxford University Press, 2023.
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2023 | Journal Article | IST-REx-ID: 14257 |
J. M. Michalska et al., “Imaging brain tissue architecture across millimeter to nanometer scales,” Nature Biotechnology. Springer Nature, 2023.
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2023 | Thesis | IST-REx-ID: 12470 |
J. M. Michalska, “A versatile toolbox for the comprehensive analysis of nervous tissue organization with light microscopy,” Institute of Science and Technology Austria, 2023.
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2022 | Journal Article | IST-REx-ID: 12495 |
E. B. Iofinova, N. H. Konstantinov, and C. Lampert, “FLEA: Provably robust fair multisource learning from unreliable training data,” Transactions on Machine Learning Research. ML Research Press, 2022.
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2022 | Thesis | IST-REx-ID: 11128 |
L. Matejovicova, “Genetic basis of flower colour as a model for adaptive evolution,” Institute of Science and Technology Austria, 2022.
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2022 | Journal Article | IST-REx-ID: 11432 |
C. Schreck and C. Wojtan, “Coupling 3D liquid simulation with 2D wave propagation for large scale water surface animation using the equivalent sources method,” Computer Graphics Forum, vol. 41, no. 2. Wiley, pp. 343–353, 2022.
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2022 | Journal Article | IST-REx-ID: 10826 |
G. Valperga and M. de Bono, “Impairing one sensory modality enhances another by reconfiguring peptidergic signalling in Caenorhabditis elegans,” eLife, vol. 11. eLife Sciences Publications, 2022.
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2022 | Journal Article | IST-REx-ID: 11155 |
M. Obr, W. J. H. Hagen, R. A. Dick, L. Yu, A. Kotecha, and F. K. Schur, “Exploring high-resolution cryo-ET and subtomogram averaging capabilities of contemporary DEDs,” Journal of Structural Biology, vol. 214, no. 2. Elsevier, 2022.
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2022 | Journal Article | IST-REx-ID: 11470 |
P. Brighi, A. A. Michailidis, D. A. Abanin, and M. Serbyn, “Propagation of many-body localization in an Anderson insulator,” Physical Review B, vol. 105, no. 22. American Physical Society, 2022.
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2022 | Journal Article | IST-REx-ID: 11736 |
G. Sperl, R. M. Sánchez-Banderas, M. Li, C. Wojtan, and M. A. Otaduy, “Estimation of yarn-level simulation models for production fabrics,” ACM Transactions on Graphics, vol. 41, no. 4. Association for Computing Machinery, 2022.
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2022 | Journal Article | IST-REx-ID: 12109 |
F. Pertl, J. C. A. Sobarzo Ponce, L. B. Shafeek, T. Cramer, and S. R. Waitukaitis, “Quantifying nanoscale charge density features of contact-charged surfaces with an FEM/KPFM-hybrid approach,” Physical Review Materials, vol. 6, no. 12. American Physical Society, 2022.
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2022 | Journal Article | IST-REx-ID: 12138 |
V. Kravchuk, O. Petrova, D. Kampjut, A. Wojciechowska-Bason, Z. Breese, and L. A. Sazanov, “A universal coupling mechanism of respiratory complex I,” Nature, vol. 609, no. 7928. Springer Nature, pp. 808–814, 2022.
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2022 | Journal Article | IST-REx-ID: 12142 |
S. E. Ojavee, Z. Kutalik, and M. R. Robinson, “Liability-scale heritability estimation for biobank studies of low-prevalence disease,” The American Journal of Human Genetics, vol. 109, no. 11. Elsevier, pp. 2009–2017, 2022.
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2022 | Journal Article | IST-REx-ID: 10284 |
B. E. Casillas Perez, C. Pull, F. Naiser, E. Naderlinger, J. Matas, and S. Cremer, “Early queen infection shapes developmental dynamics and induces long-term disease protection in incipient ant colonies,” Ecology Letters, vol. 25, no. 1. Wiley, pp. 89–100, 2022.
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2022 | Journal Article | IST-REx-ID: 11469 |
P. Brighi, A. Michailidis, K. Kirova, D. A. Abanin, and M. Serbyn, “Localization of a mobile impurity interacting with an Anderson insulator,” Physical Review B, vol. 105, no. 22. American Physical Society, 2022.
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2022 | Journal Article | IST-REx-ID: 11411 |
P. Surendranadh, L. S. Arathoon, C. Baskett, D. Field, M. Pickup, and N. H. Barton, “Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus,” Genetics, vol. 221, no. 3. Oxford University Press, 2022.
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2022 | Journal Article | IST-REx-ID: 12244 |
G. Colombo et al., “A tool for mapping microglial morphology, morphOMICs, reveals brain-region and sex-dependent phenotypes,” Nature Neuroscience, vol. 25, no. 10. Springer Nature, pp. 1379–1393, 2022.
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2022 | Thesis | IST-REx-ID: 12378 |
G. Colombo, “MorphOMICs, a tool for mapping microglial morphology, reveals brain region- and sex-dependent phenotypes,” Institute of Science and Technology Austria, 2022.
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2022 | Journal Article | IST-REx-ID: 12248 |
M. N. Elkrewi et al., “ZW sex-chromosome evolution and contagious parthenogenesis in Artemia brine shrimp,” Genetics, vol. 222, no. 2. Oxford University Press, 2022.
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2021 | Journal Article | IST-REx-ID: 10535 |
K. Bodova, E. Szep, and N. H. Barton, “Dynamic maximum entropy provides accurate approximation of structured population dynamics,” PLoS Computational Biology, vol. 17, no. 12. Public Library of Science, 2021.
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2021 | Conference Paper | IST-REx-ID: 11458 |
E.-A. Peste, E. B. Iofinova, A. Vladu, and D.-A. Alistarh, “AC/DC: Alternating Compressed/DeCompressed training of deep neural networks,” in 35th Conference on Neural Information Processing Systems, Virtual, Online, 2021, vol. 34, pp. 8557–8570.
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2021 | Journal Article | IST-REx-ID: 9168 |
C. Fraisse and H. Sachdeva, “The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes,” Genetics, vol. 217, no. 2. Genetics Society of America, 2021.
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2021 | Journal Article | IST-REx-ID: 9431 |
M. Obr et al., “Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer,” Nature Communications, vol. 12, no. 1. Nature Research, 2021.
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2021 | Journal Article | IST-REx-ID: 9558 |
G. Yalniz, B. Hof, and N. B. Budanur, “Coarse graining the state space of a turbulent flow using periodic orbits,” Physical Review Letters, vol. 126, no. 24. American Physical Society, 2021.
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2021 | Journal Article | IST-REx-ID: 9818 |
G. Sperl, R. Narain, and C. Wojtan, “Mechanics-aware deformation of yarn pattern geometry,” ACM Transactions on Graphics, vol. 40, no. 4. Association for Computing Machinery, 2021.
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2021 | Journal Article | IST-REx-ID: 10167 |
M. N. Elkrewi, M. A. Moldovan, M. A. L. Picard, and B. Vicoso, “Schistosome W-Linked genes inform temporal dynamics of sex chromosome evolution and suggest candidate for sex determination,” Molecular Biology and Evolution. Oxford University Press , 2021.
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2021 | Journal Article | IST-REx-ID: 10146
I. Vercellino and L. A. Sazanov, “Structure and assembly of the mammalian mitochondrial supercomplex CIII2CIV,” Nature, vol. 598, no. 7880. Springer Nature, pp. 364–367, 2021.
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