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87 Publications
2024 | Journal Article | IST-REx-ID: 14979 | 
Datler, J., Hansen, J., Thader, A., Schlögl, A., Bauer, L. W., Hodirnau, V.-V., & Schur, F. K. (2024). Multi-modal cryo-EM reveals trimers of protein A10 to form the palisade layer in poxvirus cores. Nature Structural & Molecular Biology. Springer Nature. https://doi.org/10.1038/s41594-023-01201-6
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2024 | Thesis | IST-REx-ID: 15020 |
Hledik, M. (2024). Genetic information and biological optimization. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:15020
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2024 | Journal Article | IST-REx-ID: 15146 |
Zens, B., Fäßler, F., Hansen, J., Hauschild, R., Datler, J., Hodirnau, V.-V., … Schur, F. K. (2024). Lift-out cryo-FIBSEM and cryo-ET reveal the ultrastructural landscape of extracellular matrix. Journal of Cell Biology. Rockefeller University Press. https://doi.org/10.1083/jcb.202309125
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2024 | Journal Article | IST-REx-ID: 15323
Vercellino, I., & Sazanov, L. A. (2024). SCAF1 drives the compositional diversity of mammalian respirasomes. Nature Structural and Molecular Biology. Springer Nature. https://doi.org/10.1038/s41594-024-01255-0
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2024 | Journal Article | IST-REx-ID: 15313 |
Agasthya, L. N., & Muller, C. J. (2024). Dynamics and scaling of internally cooled convection. Communications in Nonlinear Science and Numerical Simulation. Elsevier. https://doi.org/10.1016/j.cnsns.2024.108011
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2023 | Conference Paper | IST-REx-ID: 13053 |
Peste, E.-A., Vladu, A., Kurtic, E., Lampert, C., & Alistarh, D.-A. (n.d.). CrAM: A Compression-Aware Minimizer. In 11th International Conference on Learning Representations . Kigali, Rwanda .
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2023 | Thesis | IST-REx-ID: 13074 |
Peste, E.-A. (2023). Efficiency and generalization of sparse neural networks. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:13074
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2023 | Thesis | IST-REx-ID: 12732 |
Brighi, P. (2023). Ergodicity breaking in disordered and kinetically constrained quantum many-body systems. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:12732
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2023 | Journal Article | IST-REx-ID: 14341
Scarselli, D., Lopez Alonso, J. M., Varshney, A., & Hof, B. (2023). Turbulence suppression by cardiac-cycle-inspired driving of pipe flow. Nature. Springer Nature. https://doi.org/10.1038/s41586-023-06399-5
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2023 | Journal Article | IST-REx-ID: 12349 |
Gupta, D., Mlynarski, W. F., Sumser, A. L., Symonova, O., Svaton, J., & Jösch, M. A. (2023). Panoramic visual statistics shape retina-wide organization of receptive fields. Nature Neuroscience. Springer Nature. https://doi.org/10.1038/s41593-023-01280-0
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2023 | Research Data | IST-REx-ID: 12370 |
Gupta, D., Sumser, A. L., & Jösch, M. A. (2023). Research Data for: Panoramic visual statistics shape retina-wide organization of receptive fields. Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:12370
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2023 | Conference Paper | IST-REx-ID: 14461 |
Markov, I., Vladu, A., Guo, Q., & Alistarh, D.-A. (2023). Quantized distributed training of large models with convergence guarantees. In Proceedings of the 40th International Conference on Machine Learning (Vol. 202, pp. 24020–24044). Honolulu, Hawaii, HI, United States: ML Research Press.
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2023 | Conference Paper | IST-REx-ID: 14458 |
Frantar, E., & Alistarh, D.-A. (2023). SparseGPT: Massive language models can be accurately pruned in one-shot. In Proceedings of the 40th International Conference on Machine Learning (Vol. 202, pp. 10323–10337). Honolulu, Hawaii, HI, United States: ML Research Press.
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2023 | Journal Article | IST-REx-ID: 12334 |
Fäßler, F., Javoor, M., Datler, J., Döring, H., Hofer, F., Dimchev, G. A., … Schur, F. K. (2023). ArpC5 isoforms regulate Arp2/3 complex–dependent protrusion through differential Ena/VASP positioning. Science Advances. American Association for the Advancement of Science. https://doi.org/10.1126/sciadv.add6495
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2023 | Research Data | IST-REx-ID: 14562 |
Schur, F. K. (2023). Research data of the publication “ArpC5 isoforms regulate Arp2/3 complex-dependent protrusion through differential Ena/VASP positioning.” Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:14562
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2023 | Journal Article | IST-REx-ID: 14040 |
Zhao, Z., Vercellino, I., Knoppová, J., Sobotka, R., Murray, J. W., Nixon, P. J., … Komenda, J. (2023). The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-023-40388-6
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2023 | Journal Article | IST-REx-ID: 14077 |
Puixeu Sala, G., Macon, A., & Vicoso, B. (2023). Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster. G3: Genes, Genomes, Genetics. Oxford University Press. https://doi.org/10.1093/g3journal/jkad121
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2023 | Thesis | IST-REx-ID: 14651 |
Arathoon, L. S. (2023). Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:14651
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2023 | Journal Article | IST-REx-ID: 14240 |
Jeschke, S., & Wojtan, C. (2023). Generalizing shallow water simulations with dispersive surface waves. ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3592098
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2023 | Research Data | IST-REx-ID: 12817 |
Danzl, J. G. (2023). Research data for the publication “Dense 4D nanoscale reconstruction of living brain tissue.” Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:12817
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2023 | Journal Article | IST-REx-ID: 13267 |
Velicky, P., Miguel Villalba, E., Michalska, J. M., Lyudchik, J., Wei, D., Lin, Z., … Danzl, J. G. (2023). Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. Springer Nature. https://doi.org/10.1038/s41592-023-01936-6
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2023 | Research Data | IST-REx-ID: 13126 |
Danzl, J. G. (2023). Research data for the publication “Imaging brain tissue architecture across millimeter to nanometer scales.” Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:13126
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2023 | Journal Article | IST-REx-ID: 14257 |
Michalska, J. M., Lyudchik, J., Velicky, P., Korinkova, H., Watson, J., Cenameri, A., … Danzl, J. G. (2023). Imaging brain tissue architecture across millimeter to nanometer scales. Nature Biotechnology. Springer Nature. https://doi.org/10.1038/s41587-023-01911-8
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2023 | Conference Abstract | IST-REx-ID: 14748
Chen, Y.-L., Ly, M., & Wojtan, C. (2023). Unified treatment of contact, friction and shock-propagation in rigid body animation. In Proceedings of the ACM SIGGRAPH/Eurographics Symposium on Computer Animation. Los Angeles, CA, United States: Association for Computing Machinery. https://doi.org/10.1145/3606037.3606836
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2023 | Thesis | IST-REx-ID: 12470 |
Michalska, J. M. (2023). A versatile toolbox for the comprehensive analysis of nervous tissue organization with light microscopy. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:12470
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2023 | Journal Article | IST-REx-ID: 14613 |
Lasne, C., Elkrewi, M. N., Toups, M. A., Layana Franco, L. A., Macon, A., & Vicoso, B. (2023). The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome. Molecular Biology and Evolution. Oxford University Press. https://doi.org/10.1093/molbev/msad245
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2022 | Journal Article | IST-REx-ID: 12495 |
Iofinova, E. B., Konstantinov, N. H., & Lampert, C. (2022). FLEA: Provably robust fair multisource learning from unreliable training data. Transactions on Machine Learning Research. ML Research Press.
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2022 | Thesis | IST-REx-ID: 11128 |
Matejovicova, L. (2022). Genetic basis of flower colour as a model for adaptive evolution. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:11128
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2022 | Journal Article | IST-REx-ID: 11432 |
Schreck, C., & Wojtan, C. (2022). Coupling 3D liquid simulation with 2D wave propagation for large scale water surface animation using the equivalent sources method. Computer Graphics Forum. Wiley. https://doi.org/10.1111/cgf.14478
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2022 | Journal Article | IST-REx-ID: 10826 |
Valperga, G., & de Bono, M. (2022). Impairing one sensory modality enhances another by reconfiguring peptidergic signalling in Caenorhabditis elegans. ELife. eLife Sciences Publications. https://doi.org/10.7554/eLife.68040
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2022 | Journal Article | IST-REx-ID: 11155 |
Obr, M., Hagen, W. J. H., Dick, R. A., Yu, L., Kotecha, A., & Schur, F. K. (2022). Exploring high-resolution cryo-ET and subtomogram averaging capabilities of contemporary DEDs. Journal of Structural Biology. Elsevier. https://doi.org/10.1016/j.jsb.2022.107852
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2022 | Journal Article | IST-REx-ID: 11470 |
Brighi, P., Michailidis, A. A., Abanin, D. A., & Serbyn, M. (2022). Propagation of many-body localization in an Anderson insulator. Physical Review B. American Physical Society. https://doi.org/10.1103/physrevb.105.l220203
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2022 | Journal Article | IST-REx-ID: 11736 |
Sperl, G., Sánchez-Banderas, R. M., Li, M., Wojtan, C., & Otaduy, M. A. (2022). Estimation of yarn-level simulation models for production fabrics. ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3528223.3530167
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2022 | Journal Article | IST-REx-ID: 12109 |
Pertl, F., Sobarzo Ponce, J. C. A., Shafeek, L. B., Cramer, T., & Waitukaitis, S. R. (2022). Quantifying nanoscale charge density features of contact-charged surfaces with an FEM/KPFM-hybrid approach. Physical Review Materials. American Physical Society. https://doi.org/10.1103/PhysRevMaterials.6.125605
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2022 | Journal Article | IST-REx-ID: 12142 |
Ojavee, S. E., Kutalik, Z., & Robinson, M. R. (2022). Liability-scale heritability estimation for biobank studies of low-prevalence disease. The American Journal of Human Genetics. Elsevier. https://doi.org/10.1016/j.ajhg.2022.09.011
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2022 | Journal Article | IST-REx-ID: 10284 |
Casillas Perez, B. E., Pull, C., Naiser, F., Naderlinger, E., Matas, J., & Cremer, S. (2022). Early queen infection shapes developmental dynamics and induces long-term disease protection in incipient ant colonies. Ecology Letters. Wiley. https://doi.org/10.1111/ele.13907
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2022 | Journal Article | IST-REx-ID: 11469 |
Brighi, P., Michailidis, A., Kirova, K., Abanin, D. A., & Serbyn, M. (2022). Localization of a mobile impurity interacting with an Anderson insulator. Physical Review B. American Physical Society. https://doi.org/10.1103/physrevb.105.224208
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2022 | Journal Article | IST-REx-ID: 11411 |
Surendranadh, P., Arathoon, L. S., Baskett, C., Field, D., Pickup, M., & Barton, N. H. (2022). Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus. Genetics. Oxford University Press. https://doi.org/10.1093/genetics/iyac083
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2022 | Journal Article | IST-REx-ID: 12138 |
Kravchuk, V., Petrova, O., Kampjut, D., Wojciechowska-Bason, A., Breese, Z., & Sazanov, L. A. (2022). A universal coupling mechanism of respiratory complex I. Nature. Springer Nature. https://doi.org/10.1038/s41586-022-05199-7
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2022 | Journal Article | IST-REx-ID: 12244 |
Colombo, G., Cubero, R. J., Kanari, L., Venturino, A., Schulz, R., Scolamiero, M., … Siegert, S. (2022). A tool for mapping microglial morphology, morphOMICs, reveals brain-region and sex-dependent phenotypes. Nature Neuroscience. Springer Nature. https://doi.org/10.1038/s41593-022-01167-6
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2022 | Thesis | IST-REx-ID: 12378 |
Colombo, G. (2022). MorphOMICs, a tool for mapping microglial morphology, reveals brain region- and sex-dependent phenotypes. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:12378
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2022 | Journal Article | IST-REx-ID: 12248 |
Elkrewi, M. N., Khauratovich, U., Toups, M. A., Bett, V. K., Mrnjavac, A., Macon, A., … Vicoso, B. (2022). ZW sex-chromosome evolution and contagious parthenogenesis in Artemia brine shrimp. Genetics. Oxford University Press. https://doi.org/10.1093/genetics/iyac123
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2021 | Journal Article | IST-REx-ID: 10535 |
Bodova, K., Szep, E., & Barton, N. H. (2021). Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1009661
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2021 | Conference Paper | IST-REx-ID: 11458 |
Peste, E.-A., Iofinova, E. B., Vladu, A., & Alistarh, D.-A. (2021). AC/DC: Alternating Compressed/DeCompressed training of deep neural networks. In 35th Conference on Neural Information Processing Systems (Vol. 34, pp. 8557–8570). Virtual, Online: Curran Associates.
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2021 | Journal Article | IST-REx-ID: 9168 |
Fraisse, C., & Sachdeva, H. (2021). The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes. Genetics. Genetics Society of America. https://doi.org/10.1093/genetics/iyaa025
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2021 | Journal Article | IST-REx-ID: 9431 |
Obr, M., Ricana, C. L., Nikulin, N., Feathers, J.-P. R., Klanschnig, M., Thader, A., … Dick, R. A. (2021). Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer. Nature Communications. Nature Research. https://doi.org/10.1038/s41467-021-23506-0
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2021 | Journal Article | IST-REx-ID: 9558 |
Yalniz, G., Hof, B., & Budanur, N. B. (2021). Coarse graining the state space of a turbulent flow using periodic orbits. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.126.244502
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2021 | Journal Article | IST-REx-ID: 9818 |
Sperl, G., Narain, R., & Wojtan, C. (2021). Mechanics-aware deformation of yarn pattern geometry. ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3450626.3459816
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2021 | Journal Article | IST-REx-ID: 10167 |
Elkrewi, M. N., Moldovan, M. A., Picard, M. A. L., & Vicoso, B. (2021). Schistosome W-Linked genes inform temporal dynamics of sex chromosome evolution and suggest candidate for sex determination. Molecular Biology and Evolution. Oxford University Press . https://doi.org/10.1093/molbev/msab178
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2021 | Journal Article | IST-REx-ID: 10146
Vercellino, I., & Sazanov, L. A. (2021). Structure and assembly of the mammalian mitochondrial supercomplex CIII2CIV. Nature. Springer Nature. https://doi.org/10.1038/s41586-021-03927-z
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