ISTA Research Explorer

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Anastasiia Heurteur

Gabriele Buchner-Kranzl

Roland Gansch

386 Publications

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2024 | Journal Article | IST-REx-ID: 15301 |

L. Hörmayer et al., “Mechanical forces in plant tissue matrix orient cell divisions via microtubule stabilization,” Dev Cell. Elsevier, pp. S1534-5807(24)00177–1, 2024.

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2024 | Journal Article | IST-REx-ID: 15323

I. Vercellino and L. A. Sazanov, “SCAF1 drives the compositional diversity of mammalian respirasomes,” Nature Structural and Molecular Biology. Springer Nature, 2024.

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2024 | Journal Article | IST-REx-ID: 15313 |

L. N. Agasthya and C. J. Muller, “Dynamics and scaling of internally cooled convection,” Communications in Nonlinear Science and Numerical Simulation, vol. 134. Elsevier, 2024.

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2024 | Journal Article | IST-REx-ID: 15250 |

D. Boytsov et al., “Orphan lysosomal solute carrier MFSD1 facilitates highly selective dipeptide transport,” Proceedings of the National Academy of Sciences of the United States of America, vol. 121, no. 13. Proceedings of the National Academy of Sciences, 2024.

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2024 | Journal Article | IST-REx-ID: 15146 |

B. Zens et al., “Lift-out cryo-FIBSEM and cryo-ET reveal the ultrastructural landscape of extracellular matrix,” Journal of Cell Biology, vol. 223, no. 6. Rockefeller University Press, 2024.

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2024 | Journal Article | IST-REx-ID: 15182 |

T. Kleinhanns et al., “A route to high thermoelectric performance: Solution‐based control of microstructure and composition in Ag2Se,” Advanced Energy Materials. Wiley, 2024.

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2024 | Thesis | IST-REx-ID: 15101 |

J. Chen, “Developmental transformation of nanodomain coupling between Ca2+ channels and release sensors at a central GABAergic synapse,” Institute of Science and Technology Austria, 2024.

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2024 | Journal Article | IST-REx-ID: 15257 |

I. Kulich, J. Schmid, A. Teplova, L. Qi, and J. Friml, “Rapid translocation of NGR proteins driving polarization of PIN-activating D6 protein kinase during root gravitropism,” eLife, vol. 12. eLife Sciences Publications, 2024.

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2024 | Journal Article | IST-REx-ID: 15118

P. Nußbaum et al., “Proteins containing photosynthetic reaction centre domains modulate FtsZ-based archaeal cell division,” Nature Microbiology, vol. 9, no. 3. Springer Nature, pp. 698–711, 2024.

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2024 | Thesis | IST-REx-ID: 15020 |

M. Hledik, “Genetic information and biological optimization,” Institute of Science and Technology Austria, 2024.

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2024 | Journal Article | IST-REx-ID: 15084 |

P. Koppensteiner et al., “GABAB receptors induce phasic release from medial habenula terminals through activity-dependent recruitment of release-ready vesicles,” Proceedings of the National Academy of Sciences, vol. 121, no. 8. Proceedings of the National Academy of Sciences, 2024.

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2024 | Journal Article | IST-REx-ID: 14979 |

J. Datler et al., “Multi-modal cryo-EM reveals trimers of protein A10 to form the palisade layer in poxvirus cores,” Nature Structural & Molecular Biology. Springer Nature, 2024.

2024 | Journal Article | IST-REx-ID: 15048 |

A. Schauer, K. Pranjic-Ferscha, R. Hauschild, and C.-P. J. Heisenberg, “Robust axis elongation by Nodal-dependent restriction of BMP signaling,” Development, vol. 151, no. 4. The Company of Biologists, pp. 1–18, 2024.

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2024 | Thesis | IST-REx-ID: 14711 |

O. O. Olusanya, “Local adaptation, genetic load and extinction in metapopulations,” Institute of Science and Technology Austria, 2024.

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2024 | Journal Article | IST-REx-ID: 12875 |

G. T. Cheung et al., “Multipotent progenitors instruct ontogeny of the superior colliculus,” Neuron, vol. 112, no. 2. Elsevier, p. 230–246.e11, 2024.

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2024 | Journal Article | IST-REx-ID: 14843

J. Chen et al., “Developmental transformation of Ca2+ channel-vesicle nanotopography at a central GABAergic synapse,” Neuron. Elsevier.

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2024 | Journal Article | IST-REx-ID: 14846 |

S. Caballero Mancebo et al., “Friction forces determine cytoplasmic reorganization and shape changes of ascidian oocytes upon fertilization,” Nature Physics. Springer Nature, 2024.

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2024 | Journal Article | IST-REx-ID: 14795 |

F. N. Arslan, E. B. Hannezo, J. Merrin, M. Loose, and C.-P. J. Heisenberg, “Adhesion-induced cortical flows pattern E-cadherin-mediated cell contacts,” Current Biology, vol. 34, no. 1. Elsevier, p. 171–182.e8, 2024.

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2024 | Journal Article | IST-REx-ID: 14793 |

M. Valentini et al., “Parity-conserving Cooper-pair transport and ideal superconducting diode in planar germanium,” Nature Communications, vol. 15. Springer Nature, 2024.

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2024 | Journal Article | IST-REx-ID: 14794 |

A. H. Hansen and S. Hippenmeyer, “Time-lapse imaging of cortical projection neuron migration in mice using mosaic analysis with double markers,” STAR Protocols, vol. 5, no. 1. Elsevier, 2024.

2023 | Thesis | IST-REx-ID: 14697

J. A. Stopp, “Neutrophils on the hunt: Migratory strategies employed by neutrophils to fulfill their effector function,” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 14651 |

L. S. Arathoon, “Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 14683 |

N. Amberg, G. T. Cheung, and S. Hippenmeyer, “Protocol for sorting cells from mouse brains labeled with mosaic analysis with double markers by flow cytometry,” STAR Protocols, vol. 5, no. 1. Elsevier, 2023.

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2023 | Preprint | IST-REx-ID: 14644 |

K. Tluckova, A. P. Testa Salmazo, and C. Bernecky, “Mechanism of mammalian transcriptional repression by noncoding RNA.” Institute of Science and Technology Austria.

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2023 | Journal Article | IST-REx-ID: 14719

H. Mollania et al., “Nanostructured Li₂S cathodes for silicon-sulfur batteries,” ACS Applied Materials and Interfaces, vol. 15, no. 50. American Chemical Society, pp. 58462–58475, 2023.

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2023 | Journal Article | IST-REx-ID: 14613 |

C. Lasne, M. N. Elkrewi, M. A. Toups, L. A. Layana Franco, A. Macon, and B. Vicoso, “The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome,” Molecular Biology and Evolution, vol. 40, no. 12. Oxford University Press, 2023.

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2023 | Journal Article | IST-REx-ID: 13314 |

Z. Dunajova et al., “Chiral and nematic phases of flexible active filaments,” Nature Physics, vol. 19. Springer Nature, pp. 1916–1926, 2023.

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2023 | Thesis | IST-REx-ID: 14641

M. Hennessey-Wesen, “Adaptive mutation in E. coli modulated by luxS,” Institute of Science and Technology Austria, 2023.

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2023 | Research Data | IST-REx-ID: 14562 |

F. K. Schur, “Research data of the publication ‘ArpC5 isoforms regulate Arp2/3 complex-dependent protrusion through differential Ena/VASP positioning.’” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 14530 |

M. Riedl, “Synchronization in collectively moving active matter,” Institute of Science and Technology Austria, 2023.

[Updated Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 14547 |

D. T. Phan, “Resonant microwave spectroscopy of Al-InAs,” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 14510

N. Gnyliukh, “Mechanism of clathrin-coated vesicle formation during endocytosis in plants,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 14032 |

S. Mukhopadhyay et al., “Superconductivity from a melted insulator in Josephson junction arrays,” Nature Physics, vol. 19. Springer Nature, pp. 1630–1635, 2023.

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2023 | Journal Article | IST-REx-ID: 14517 |

M. Zemlicka et al., “Compact vacuum-gap transmon qubits: Selective and sensitive probes for superconductor surface losses,” Physical Review Applied, vol. 20, no. 4. American Physical Society, 2023.

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2023 | Journal Article | IST-REx-ID: 14363 |

M. E. Maes et al., “Mitochondrial network adaptations of microglia reveal sex-specific stress response after injury and UCP2 knockout,” iScience, vol. 26, no. 10. Elsevier, 2023.

2023 | Preprint | IST-REx-ID: 14591 |

N. Gnyliukh et al., “Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in plants,” bioRxiv. .

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2023 | Thesis | IST-REx-ID: 14280

P. Radler, “Spatiotemporal signaling during assembly of the bacterial divisome,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 13188 |

C. Hafner and B. Bickel, “The design space of Kirchhoff rods,” ACM Transactions on Graphics, vol. 42, no. 5. Association for Computing Machinery, 2023.

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2023 | Journal Article | IST-REx-ID: 14361 |

M. Riedl, I. D. Mayer, J. Merrin, M. K. Sixt, and B. Hof, “Synchronization in collectively moving inanimate and living active matter,” Nature Communications, vol. 14. Springer Nature, 2023.

2023 | Thesis | IST-REx-ID: 14323

K. Kuzmicz-Kowalska, “Regulation of neural progenitor survival by Shh and BMP in the developing spinal cord,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 14341

D. Scarselli, J. M. Lopez Alonso, A. Varshney, and B. Hof, “Turbulence suppression by cardiac-cycle-inspired driving of pipe flow,” Nature, vol. 621, no. 7977. Springer Nature, pp. 71–74, 2023.

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2023 | Journal Article | IST-REx-ID: 14257 |

J. M. Michalska et al., “Imaging brain tissue architecture across millimeter to nanometer scales,” Nature Biotechnology. Springer Nature, 2023.

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2023 | Journal Article | IST-REx-ID: 14255 |

J. Koch et al., “The phenuivirus Toscana virus makes an atypical use of vacuolar acidity to enter host cells,” PLoS Pathogens, vol. 19, no. 8. Public Library of Science, 2023.

2023 | Thesis | IST-REx-ID: 13984

A. Franschitz, “Individual and social immunity against viral infections in ants,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 12696 |

S. Metzler, J. Kirchner, A. V. Grasse, and S. Cremer, “Trade-offs between immunity and competitive ability in fighting ant males,” BMC Ecology and Evolution, vol. 23. Springer Nature, 2023.

2023 | Journal Article | IST-REx-ID: 14040 |

Z. Zhao et al., “The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis,” Nature Communications, vol. 14. Springer Nature, 2023.

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2023 | Research Data | IST-REx-ID: 13126 |

J. G. Danzl, “Research data for the publication ‘Imaging brain tissue architecture across millimeter to nanometer scales.’” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 14077 |

G. Puixeu Sala, A. Macon, and B. Vicoso, “Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster,” G3: Genes, Genomes, Genetics, vol. 13, no. 8. Oxford University Press, 2023.

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2023 | Journal Article | IST-REx-ID: 14082

T. Higashi et al., “ZnUMBA - a live imaging method to detect local barrier breaches,” Journal of Cell Science, vol. 136, no. 15. The Company of Biologists, 2023.

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2023 | Journal Article | IST-REx-ID: 14240 |

S. Jeschke and C. Wojtan, “Generalizing shallow water simulations with dispersive surface waves,” ACM Transactions on Graphics, vol. 42, no. 4. Association for Computing Machinery, 2023.

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2023 | Journal Article | IST-REx-ID: 13267 |

P. Velicky et al., “Dense 4D nanoscale reconstruction of living brain tissue,” Nature Methods, vol. 20. Springer Nature, pp. 1256–1265, 2023.

2023 | Conference Abstract | IST-REx-ID: 14748

Y.-L. Chen, M. Ly, and C. Wojtan, “Unified treatment of contact, friction and shock-propagation in rigid body animation,” in Proceedings of the ACM SIGGRAPH/Eurographics Symposium on Computer Animation, Los Angeles, CA, United States, 2023.

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2023 | Conference Paper | IST-REx-ID: 14461 |

I. Markov, A. Vladu, Q. Guo, and D.-A. Alistarh, “Quantized distributed training of large models with convergence guarantees,” in Proceedings of the 40th International Conference on Machine Learning, Honolulu, Hawaii, HI, United States, 2023, vol. 202, pp. 24020–24044.

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2023 | Conference Paper | IST-REx-ID: 14458 |

E. Frantar and D.-A. Alistarh, “SparseGPT: Massive language models can be accurately pruned in one-shot,” in Proceedings of the 40th International Conference on Machine Learning, Honolulu, Hawaii, HI, United States, 2023, vol. 202, pp. 10323–10337.

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2023 | Journal Article | IST-REx-ID: 13049 |

M. Freire, M. Bhargava, C. Schreck, P.-A. Hugron, B. Bickel, and S. Lefebvre, “PCBend: Light up your 3D shapes with foldable circuit boards,” Transactions on Graphics, vol. 42, no. 4. Association for Computing Machinery, 2023.

[Submitted Version] View | Files available | DOI | WoS

2023 | Research Data | IST-REx-ID: 13116 |

Z. Dunajova et al., “Chiral and nematic phases of flexible active filaments.” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 12984 |

M. Piovarci, A. Chapiro, and B. Bickel, “Skin-Screen: A computational fabrication framework for color tattoos,” Transactions on Graphics, vol. 42, no. 4. Association for Computing Machinery, 2023.

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2023 | Journal Article | IST-REx-ID: 14434

R. He et al., “A 3d‐4d‐5d high entropy alloy as a bifunctional oxygen catalyst for robust aqueous zinc–air batteries,” Advanced Materials. Wiley, 2023.

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2023 | Thesis | IST-REx-ID: 13286 |

M. Valentini, “Mesoscopic phenomena in hybrid semiconductor-superconductor nanodevices : From full-shell nanowires to two-dimensional hole gas in germanium,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 13968 |

R. Hasler et al., “Optical and electronic signal stabilization of plasmonic fiber optic gate electrodes: Towards improved real-time dual-mode biosensing,” Frontiers in Physics, vol. 11. Frontiers, 2023.

[Published Version] View | Files available | DOI | WoS

2023 | Journal Article | IST-REx-ID: 13227 |

F. Hassani, M. Peruzzo, L. Kapoor, A. Trioni, M. Zemlicka, and J. M. Fink, “Inductively shunted transmons exhibit noise insensitive plasmon states and a fluxon decay exceeding 3 hours,” Nature Communications, vol. 14. Springer Nature, 2023.

2023 | Journal Article | IST-REx-ID: 13212 |

H. Chen, L. Li, M. Zou, L. Qi, and J. Friml, “Distinct functions of TIR1 and AFB1 receptors in auxin signalling.,” Molecular Plant, vol. 16, no. 7. Elsevier , pp. 1117–1119, 2023.

2023 | Journal Article | IST-REx-ID: 13096 |

M. Degen et al., “Structural basis of NINJ1-mediated plasma membrane rupture in cell death,” Nature, vol. 618. Springer Nature, pp. 1065–1071, 2023.

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2023 | Preprint | IST-REx-ID: 13312 |

M. Valentini et al., “Radio frequency driven superconducting diode and parity conserving Cooper pair transport in a two-dimensional germanium hole gas,” arXiv. .

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2023 | Journal Article | IST-REx-ID: 13264 |

D. T. Phan et al., “Gate-tunable superconductor-semiconductor parametric amplifier,” Physical Review Applied, vol. 19, no. 6. American Physical Society, 2023.

2023 | Journal Article | IST-REx-ID: 13202 |

K. Eguchi, E. Le Monnier, and R. Shigemoto, “Nanoscale phosphoinositide distribution on cell membranes of mouse cerebellar neurons,” The Journal of Neuroscience, vol. 43, no. 23. Society for Neuroscience, pp. 4197–4216, 2023.

2023 | Journal Article | IST-REx-ID: 13127 |

B. E. Casillas Perez, K. Bodova, A. V. Grasse, G. Tkačik, and S. Cremer, “Dynamic pathogen detection and social feedback shape collective hygiene in ants,” Nature Communications, vol. 14. Springer Nature, 2023.

2023 | Thesis | IST-REx-ID: 13107 |

L. Knaus, “The metabolism of the developing brain : How large neutral amino acids modulate perinatal neuronal excitability and survival,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 13117 |

E. Redchenko, A. V. Poshakinskiy, R. Sett, M. Zemlicka, A. N. Poddubny, and J. M. Fink, “Tunable directional photon scattering from a pair of superconducting qubits,” Nature Communications, vol. 14. Springer Nature, 2023.

[Published Version] View | Files available | DOI | WoS | arXiv

2023 | Thesis | IST-REx-ID: 13074 |

E.-A. Peste, “Efficiency and generalization of sparse neural networks,” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 13081

L. Bocanegra, “Epithelial dynamics during mouse neural tube development,” Institute of Science and Technology Austria, 2023.

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2023 | Research Data | IST-REx-ID: 12817 |

J. G. Danzl, “Research data for the publication ‘Dense 4D nanoscale reconstruction of living brain tissue.’” Institute of Science and Technology Austria, 2023.

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2023 | Research Data | IST-REx-ID: 12945 |

S. Cremer, “Data from: ‘Dynamic pathogen detection and social feedback shape collective hygiene in ants’ .” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 12891

A. Schauer, “Mesendoderm formation in zebrafish gastrulation: The role of extraembryonic tissues,” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 13175 |

R. Sahu, “Cavity quantum electrooptics,” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 12900

R. Sahu, “Cavity quantum electrooptics,” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 12897 |

C. Hafner, “Inverse shape design with parametric representations: Kirchhoff Rods and parametric surface models,” Institute of Science and Technology Austria, 2023.

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2023 | Conference Paper | IST-REx-ID: 13053 |

E.-A. Peste, A. Vladu, E. Kurtic, C. Lampert, and D.-A. Alistarh, “CrAM: A Compression-Aware Minimizer,” in 11th International Conference on Learning Representations , Kigali, Rwanda .

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2023 | Thesis | IST-REx-ID: 12885 |

M. Calcabrini, “Nanoparticle-based semiconductor solids: From synthesis to consolidation,” Institute of Science and Technology Austria, 2023.

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2023 | Book Chapter | IST-REx-ID: 13052

A. F. Leithner, J. Merrin, and M. K. Sixt, “En-Face Imaging of T Cell-Dendritic Cell Immunological Synapses,” in The Immune Synapse, vol. 2654, C. Baldari and M. Dustin, Eds. New York, NY: Springer Nature, 2023, pp. 137–147.

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2023 | Journal Article | IST-REx-ID: 12802 |

L. Knaus et al., “Large neutral amino acid levels tune perinatal neuronal excitability and survival,” Cell, vol. 186, no. 9. Elsevier, p. 1950–1967.e25, 2023.

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2023 | Thesis | IST-REx-ID: 12826 |

V. Pokusaeva, “Neural control of optic flow-based navigation in Drosophila melanogaster,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 12830 |

K. Huljev et al., “A hydraulic feedback loop between mesendoderm cell migration and interstitial fluid relocalization promotes embryonic axis formation in zebrafish,” Developmental Cell, vol. 58, no. 7. Elsevier, p. 582–596.e7, 2023.

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2023 | Thesis | IST-REx-ID: 12809 |

C. Alcarva, “Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 12832

R. He et al., “A CrMnFeCoNi high entropy alloy boosting oxygen evolution/reduction reactions and zinc-air battery performance,” Energy Storage Materials, vol. 58, no. 4. Elsevier, pp. 287–298, 2023.

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2023 | Journal Article | IST-REx-ID: 12349 |

D. Gupta, W. F. Mlynarski, A. L. Sumser, O. Symonova, J. Svaton, and M. A. Jösch, “Panoramic visual statistics shape retina-wide organization of receptive fields,” Nature Neuroscience, vol. 26. Springer Nature, pp. 606–614, 2023.

2023 | Thesis | IST-REx-ID: 12781

V. Kravchuk, “Structural and mechanistic study of bacterial complex I and its cyanobacterial ortholog,” Institute of Science and Technology Austria, 2023.

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2023 | Thesis | IST-REx-ID: 12726

M. Riedl, “Synchronization in collectively moving active matter,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 12749

Cikes D, Elsayad K, Sezgin E, Koitai E, Ferenc T, Orthofer M, Yarwood R, Heinz LX, Sedlyarov V, Darwish-Miranda N, Taylor A, Grapentine S, al-Murshedi F, Abot A, Weidinger A, Kutchukian C, Sanchez C, Cronin SJF, Novatchkova M, Kavirayani A, Schuetz T, Haubner B, Haas L, Hagelkruys A, Jackowski S, Kozlov A, Jacquemond V, Knauf C, Superti-Furga G, Rullman E, Gustafsson T, McDermot J, Lowe M, Radak Z, Chamberlain JS, Bakovic M, Banka S, Penninger JM. 2023. PCYT2-regulated lipid biosynthesis is critical to muscle health and ageing. Nature Metabolism.

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2023 | Thesis | IST-REx-ID: 12732 |

P. Brighi, “Ergodicity breaking in disordered and kinetically constrained quantum many-body systems,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 12759 |

J. S. Rothman, C. Borges Merjane, N. Holderith, P. M. Jonas, and R. Angus Silver, “Validation of a stereological method for estimating particle size and density from 2D projections with high accuracy,” PLoS ONE, vol. 18, no. 3 March. Public Library of Science, 2023.

[Published Version] View | Files available | DOI | WoS

2023 | Thesis | IST-REx-ID: 12716 |

L. Burnett, “To flee, or not to flee? Using innate defensive behaviours to investigate rapid perceptual decision-making through subcortical circuits in mouse models of autism,” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 12543 |

M. Stock et al., “Pathogen evasion of social immunity,” Nature Ecology and Evolution, vol. 7. Springer Nature, pp. 450–460, 2023.

2023 | Journal Article | IST-REx-ID: 12789 |

N. Mujica and S. R. Waitukaitis, “Accurate determination of the shapes of granular charge distributions,” Physical Review E, vol. 107, no. 3. American Physical Society, 2023.

[Published Version] View | Files available | DOI | WoS

2023 | Thesis | IST-REx-ID: 12491 |

B. Zens, “Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography,” Institute of Science and Technology Austria, 2023.

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2023 | Research Data | IST-REx-ID: 12370 |

D. Gupta, A. L. Sumser, and M. A. Jösch, “Research Data for: Panoramic visual statistics shape retina-wide organization of receptive fields.” Institute of Science and Technology Austria, 2023.

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2023 | Journal Article | IST-REx-ID: 12334 |

F. Fäßler et al., “ArpC5 isoforms regulate Arp2/3 complex–dependent protrusion through differential Ena/VASP positioning,” Science Advances, vol. 9, no. 3. American Association for the Advancement of Science, 2023.

[Published Version] View | Files available | DOI | WoS

2023 | Thesis | IST-REx-ID: 12470 |

J. M. Michalska, “A versatile toolbox for the comprehensive analysis of nervous tissue organization with light microscopy,” Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 12109 |

F. Pertl, J. C. A. Sobarzo Ponce, L. B. Shafeek, T. Cramer, and S. R. Waitukaitis, “Quantifying nanoscale charge density features of contact-charged surfaces with an FEM/KPFM-hybrid approach,” Physical Review Materials, vol. 6, no. 12. American Physical Society, 2022.

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2022 | Journal Article | IST-REx-ID: 12572 |

E. B. Iofinova, N. H. Konstantinov, and C. Lampert, “FLEA: Provably robust fair multisource learning from unreliable training data,” fg. ML Research Press, 2022.

[Published Version] View | Files available | Download Published Version (ext.)

2022 | Journal Article | IST-REx-ID: 12495 |

E. B. Iofinova, N. H. Konstantinov, and C. Lampert, “FLEA: Provably robust fair multisource learning from unreliable training data,” Transactions on Machine Learning Research. ML Research Press, 2022.

[Published Version] View | Files available | Download Published Version (ext.) | arXiv

2022 | Journal Article | IST-REx-ID: 12117 |

V. Hübschmann, M. Korkut, and S. Siegert, “Assessing human iPSC-derived microglia identity and function by immunostaining, phagocytosis, calcium activity, and inflammation assay,” STAR Protocols, vol. 3, no. 4. Elsevier, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 12118 |

M. Valentini et al., “Majorana-like Coulomb spectroscopy in the absence of zero-bias peaks,” Nature, vol. 612, no. 7940. Springer Nature, pp. 442–447, 2022.

2022 | Journal Article | IST-REx-ID: 12209 |

D. C. Nunes Pinheiro, R. Kardos, E. B. Hannezo, and C.-P. J. Heisenberg, “Morphogen gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven unjamming,” Nature Physics, vol. 18, no. 12. Springer Nature, pp. 1482–1493, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Thesis | IST-REx-ID: 12378 |

G. Colombo, “MorphOMICs, a tool for mapping microglial morphology, reveals brain region- and sex-dependent phenotypes,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 12143 |

Zapletal D, Taborska E, Pasulka J, Malik R, Kubicek K, Zanova M, Much C, Sebesta M, Buccheri V, Horvat F, Jenickova I, Prochazkova M, Prochazka J, Pinkas M, Novacek J, Joseph DF, Sedlacek R, Bernecky C, O’Carroll D, Stefl R, Svoboda P. 2022. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. 82(21), 4064–4079.e13.

2022 | Journal Article | IST-REx-ID: 12142 |

S. E. Ojavee, Z. Kutalik, and M. R. Robinson, “Liability-scale heritability estimation for biobank studies of low-prevalence disease,” The American Journal of Human Genetics, vol. 109, no. 11. Elsevier, pp. 2009–2017, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 12144 |

L. Qi et al., “Adenylate cyclase activity of TIR1/AFB auxin receptors in plants,” Nature, vol. 611, no. 7934. Springer Nature, pp. 133–138, 2022.

2022 | Journal Article | IST-REx-ID: 11336 |

N. Amberg, F. Pauler, C. Streicher, and S. Hippenmeyer, “Tissue-wide genetic and cellular landscape shapes the execution of sequential PRC2 functions in neural stem cell lineage progression,” Science Advances, vol. 8, no. 44. American Association for the Advancement of Science, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 12239 |

A. J. Johnson et al., “Three-dimensional visualization of planta clathrin-coated vesicles at ultrastructural resolution,” Molecular Plant, vol. 15, no. 10. Elsevier, pp. 1533–1542, 2022.

2022 | Journal Article | IST-REx-ID: 12244 |

G. Colombo et al., “A tool for mapping microglial morphology, morphOMICs, reveals brain-region and sex-dependent phenotypes,” Nature Neuroscience, vol. 25, no. 10. Springer Nature, pp. 1379–1393, 2022.

2022 | Journal Article | IST-REx-ID: 12248 |

M. N. Elkrewi et al., “ZW sex-chromosome evolution and contagious parthenogenesis in Artemia brine shrimp,” Genetics, vol. 222, no. 2. Oxford University Press, 2022.

2022 | Thesis | IST-REx-ID: 12368 |

F. N. Arslan, “Remodeling of E-cadherin-mediated contacts via cortical flows,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Thesis | IST-REx-ID: 12366 |

E. Redchenko, “Controllable states of superconducting Qubit ensembles,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 12138 |

V. Kravchuk, O. Petrova, D. Kampjut, A. Wojciechowska-Bason, Z. Breese, and L. A. Sazanov, “A universal coupling mechanism of respiratory complex I,” Nature, vol. 609, no. 7928. Springer Nature, pp. 808–814, 2022.

2022 | Thesis | IST-REx-ID: 12358 |

G. Sperl, “Homogenizing yarn simulations: Large-scale mechanics, small-scale detail, and quantitative fitting,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 12288 |

A. L. Sumser, M. A. Jösch, P. M. Jonas, and Y. Ben Simon, “Fast, high-throughput production of improved rabies viral vectors for specific, efficient and versatile transsynaptic retrograde labeling,” eLife, vol. 11. eLife Sciences Publications, 2022.

2022 | Journal Article | IST-REx-ID: 12291 |

Friml J, Gallei MC, Gelová Z, Johnson AJ, Mazur E, Monzer A, Rodriguez Solovey L, Roosjen M, Verstraeten I, Živanović BD, Zou M, Fiedler L, Giannini C, Grones P, Hrtyan M, Kaufmann W, Kuhn A, Narasimhan M, Randuch M, Rýdza N, Takahashi K, Tan S, Teplova A, Kinoshita T, Weijers D, Rakusová H. 2022. ABP1–TMK auxin perception for global phosphorylation and auxin canalization. Nature. 609(7927), 575–581.

2022 | Journal Article | IST-REx-ID: 12262 |

M. Prattes et al., “Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1,” Nature Structural & Molecular Biology, vol. 29, no. 9. Springer Nature, pp. 942–953, 2022.

2022 | Journal Article | IST-REx-ID: 12082 |

M. Artan, M. Hartl, W. Chen, and M. de Bono, “Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans,” Journal of Biological Chemistry, vol. 298, no. 9. Elsevier, 2022.

2022 | Journal Article | IST-REx-ID: 12261 |

A. Angermayr, T. Y. Pang, G. Chevereau, K. Mitosch, M. J. Lercher, and M. T. Bollenbach, “Growth‐mediated negative feedback shapes quantitative antibiotic response,” Molecular Systems Biology, vol. 18, no. 9. Embo Press, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 12065 |

C. Prehal, S. Mondal, L. Lovicar, and S. A. Freunberger, “Exclusive solution discharge in Li-O₂ batteries?,” ACS Energy Letters, vol. 7, no. 9. American Chemical Society, pp. 3112–3119, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 11705 |

C. Chang et al., “Surface functionalization of surfactant-free particles: A strategy to tailor the properties of nanocomposites for enhanced thermoelectric performance,” Angewandte Chemie - International Edition, vol. 61, no. 35. Wiley, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Thesis | IST-REx-ID: 11945 |

R. Schulz, “Chimeric G protein-coupled receptors mimic distinct signaling pathways and modulate microglia function,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Thesis | IST-REx-ID: 11879 |

C. Artner, “Modulation of auxin transport via ZF proteins adjust plant response to high ambient temperature,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 11951 |

Y. Ben Simon, K. Käfer, P. Velicky, J. L. Csicsvari, J. G. Danzl, and P. M. Jonas, “A direct excitatory projection from entorhinal layer 6b neurons to the hippocampus contributes to spatial coding and memory,” Nature Communications, vol. 13. Springer Nature, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 11995 |

R. Schulz, M. Korkut, A. Venturino, G. Colombo, and S. Siegert, “Chimeric GPCRs mimic distinct signaling pathways and modulate microglia responses,” Nature Communications, vol. 13. Springer Nature, 2022.

2022 | Journal Article | IST-REx-ID: 12174 |

Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA, Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB, Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis. Brain. 145(8), 2687–2703.

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2022 | Journal Article | IST-REx-ID: 11843 |

K. Tomasek, A. F. Leithner, I. Glatzová, M. S. Lukesch, C. C. Guet, and M. K. Sixt, “Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14,” eLife, vol. 11. eLife Sciences Publications, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 11734 |

R. Abualia et al., “Molecular framework integrating nitrate sensing in root and auxin-guided shoot adaptive responses,” Proceedings of the National Academy of Sciences of the United States of America, vol. 119, no. 31. Proceedings of the National Academy of Sciences, 2022.

2022 | Journal Article | IST-REx-ID: 11736 |

G. Sperl, R. M. Sánchez-Banderas, M. Li, C. Wojtan, and M. A. Otaduy, “Estimation of yarn-level simulation models for production fabrics,” ACM Transactions on Graphics, vol. 41, no. 4. Association for Computing Machinery, 2022.

[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS

2022 | Journal Article | IST-REx-ID: 11478 |

K. Bartalska et al., “A systematic characterization of microglia-like cell occurrence during retinal organoid differentiation,” iScience, vol. 25, no. 7. Elsevier, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 9794 |

F. P. Assen et al., “Multitier mechanics control stromal adaptations in swelling lymph nodes,” Nature Immunology, vol. 23. Springer Nature, pp. 1246–1255, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 10791 |

A. H. Hansen et al., “Tissue-wide effects override cell-intrinsic gene function in radial neuron migration,” Oxford Open Neuroscience, vol. 1, no. 1. Oxford Academic, 2022.

[Published Version] View | Files available | DOI

2022 | Thesis | IST-REx-ID: 11473 |

K. Mysliwy, “Polarons in Bose gases and polar crystals: Some rigorous energy estimates,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 11411 |

P. Surendranadh, L. S. Arathoon, C. Baskett, D. Field, M. Pickup, and N. H. Barton, “Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus,” Genetics, vol. 221, no. 3. Oxford University Press, 2022.

2022 | Journal Article | IST-REx-ID: 11470 |

P. Brighi, A. A. Michailidis, D. A. Abanin, and M. Serbyn, “Propagation of many-body localization in an Anderson insulator,” Physical Review B, vol. 105, no. 22. American Physical Society, 2022.

2022 | Journal Article | IST-REx-ID: 11469 |

P. Brighi, A. Michailidis, K. Kirova, D. A. Abanin, and M. Serbyn, “Localization of a mobile impurity interacting with an Anderson insulator,” Physical Review B, vol. 105, no. 22. American Physical Society, 2022.

2022 | Journal Article | IST-REx-ID: 10841 |

D. Dahhan et al., “Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components,” Plant Cell, vol. 34, no. 6. Oxford Academic, pp. 2150–2173, 2022.

2022 | Journal Article | IST-REx-ID: 11155 |

M. Obr, W. J. H. Hagen, R. A. Dick, L. Yu, A. Kotecha, and F. K. Schur, “Exploring high-resolution cryo-ET and subtomogram averaging capabilities of contemporary DEDs,” Journal of Structural Biology, vol. 214, no. 2. Elsevier, 2022.

2022 | Thesis | IST-REx-ID: 11393 |

M. Jevtic, “Contextual fear learning induced changes in AMPA receptor subtypes along the proximodistal axis in dorsal hippocampus,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 11373 |

P. Radler et al., “In vitro reconstitution of Escherichia coli divisome activation,” Nature Communications, vol. 13. Springer Nature, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 11341 |

M. Lukacisin, A. Espinosa-Cantú, and M. T. Bollenbach, “Intron-mediated induction of phenotypic heterogeneity,” Nature, vol. 605. Springer Nature, pp. 113–118, 2022.

2022 | Journal Article | IST-REx-ID: 11448 |

L. Gonzalez Somermeyer et al., “Heterogeneity of the GFP fitness landscape and data-driven protein design,” eLife, vol. 11. eLife Sciences Publications, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 11432 |

C. Schreck and C. Wojtan, “Coupling 3D liquid simulation with 2D wave propagation for large scale water surface animation using the equivalent sources method,” Computer Graphics Forum, vol. 41, no. 2. Wiley, pp. 343–353, 2022.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS

2022 | Journal Article | IST-REx-ID: 10922 |

Z. Liu et al., “Worst-case rigidity analysis and optimization for assemblies with mechanical joints,” Computer Graphics Forum, vol. 41, no. 2. Wiley, pp. 507–519, 2022.

[Submitted Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 10713 |

M. Akhmanova et al., “Cell division in tissues enables macrophage infiltration,” Science, vol. 376, no. 6591. American Association for the Advancement of Science, pp. 394–396, 2022.

2022 | Thesis | IST-REx-ID: 11196 |

O. Kim, “Nanoarchitecture of hippocampal mossy fiber-CA3 pyramidal neuron synapses,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Thesis | IST-REx-ID: 11193 |

S. Wachner, “Transcriptional regulation by Dfos and BMP-signaling support tissue invasion of Drosophila immune cells,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Thesis | IST-REx-ID: 11128 |

L. Matejovicova, “Genetic basis of flower colour as a model for adaptive evolution,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Research Data | IST-REx-ID: 10934 |

P. Radler, “In vitro reconstitution of Escherichia coli divisome activation.” Institute of Science and Technology Austria, 2022.

[Submitted Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 11160 |

C. E. Villa et al., “CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories,” Cell Reports, vol. 39, no. 1. Elsevier, 2022.

2022 | Journal Article | IST-REx-ID: 10920 |

D. Jirovec et al., “Dynamics of hole singlet-triplet qubits with large g-factor differences,” Physical Review Letters, vol. 128, no. 12. American Physical Society, 2022.

[Published Version] View | Files available | DOI | WoS | arXiv

2022 | Journal Article | IST-REx-ID: 10918 |

S. Emtenani et al., “Macrophage mitochondrial bioenergetics and tissue invasion are boosted by an Atossa-Porthos axis in Drosophila,” The Embo Journal, vol. 41. Embo Press, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 10924 |

R. Sahu, W. J. Hease, A. R. Rueda Sanchez, G. M. Arnold, L. Qiu, and J. M. Fink, “Quantum-enabled operation of a microwave-optical interface,” Nature Communications, vol. 13. Springer Nature, 2022.

[Published Version] View | Files available | DOI | WoS | arXiv

2022 | Journal Article | IST-REx-ID: 10851 |

D. T. Phan et al., “Detecting induced p±ip pairing at the Al-InAs interface with a quantum microwave circuit,” Physical Review Letters, vol. 128, no. 10. American Physical Society, 2022.

2022 | Journal Article | IST-REx-ID: 10639 |

S. Windhaber et al., “The Orthobunyavirus Germiston enters host cells from late endosomes,” Journal of Virology, vol. 96, no. 5. American Society for Microbiology, 2022.

2022 | Journal Article | IST-REx-ID: 10826 |

G. Valperga and M. de Bono, “Impairing one sensory modality enhances another by reconfiguring peptidergic signalling in Caenorhabditis elegans,” eLife, vol. 11. eLife Sciences Publications, 2022.

2022 | Journal Article | IST-REx-ID: 10766 |

J. Slovakova et al., “Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion in zebrafish germ-layer progenitor cells,” Proceedings of the National Academy of Sciences of the United States of America, vol. 119, no. 8. Proceedings of the National Academy of Sciences, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 10712 |

M. Roblek et al., “The solute carrier MFSD1 decreases β1 integrin’s activation status and thus tumor metastasis,” Frontiers in Oncology, vol. 12. Frontiers, 2022.

[Published Version] View | Files available | DOI | WoS

2022 | Thesis | IST-REx-ID: 10727 |

S. Metzler, “Pathogen-mediated sexual selection and immunization in ant colonies,” Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 10703 |

F. Gaertner et al., “WASp triggers mechanosensitive actin patches to facilitate immune cell migration in dense tissues,” Developmental Cell, vol. 57, no. 1. Cell Press ; Elsevier, p. 47–62.e9, 2022.

2022 | Journal Article | IST-REx-ID: 10709 |

V. Belyaeva et al., “Fos regulates macrophage infiltration against surrounding tissue resistance by a cortical actin-based mechanism in Drosophila,” PLoS Biology, vol. 20, no. 1. Public Library of Science, p. e3001494, 2022.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2022 | Journal Article | IST-REx-ID: 10614 |

2022 | Journal Article | IST-REx-ID: 10654 |

L. Klotz, G. M. Lemoult, K. Avila, and B. Hof, “Phase transition to turbulence in spatially extended shear flows,” Physical Review Letters, vol. 128, no. 1. American Physical Society, 2022.

2022 | Journal Article | IST-REx-ID: 10284 |

B. E. Casillas Perez, C. Pull, F. Naiser, E. Naderlinger, J. Matas, and S. Cremer, “Early queen infection shapes developmental dynamics and induces long-term disease protection in incipient ant colonies,” Ecology Letters, vol. 25, no. 1. Wiley, pp. 89–100, 2022.

2021 | Journal Article | IST-REx-ID: 10123 |

Y. Liu et al., “The importance of surface adsorbates in solution‐processed thermoelectric materials: The case of SnSe,” Advanced Materials, vol. 33, no. 52. Wiley, 2021.

2021 | Journal Article | IST-REx-ID: 10606 |

B. G. Godard, R. Dumollard, C.-P. J. Heisenberg, and A. Mcdougall, “Combined effect of cell geometry and polarity domains determines the orientation of unequal division,” eLife, vol. 10. eLife Sciences Publications, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 10565 |

A. Venturino and S. Siegert, “Minimally invasive protocols and quantification for microglia-mediated perineuronal net disassembly in mouse brain,” STAR Protocols, vol. 2, no. 4. Elsevier ; Cell Press, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 10816 |

J. Guzmán, A. Schlögl, C. Espinoza Martinez, X. Zhang, B. Suter, and P. M. Jonas, “How connectivity rules and synaptic properties shape the efficacy of pattern separation in the entorhinal cortex–dentate gyrus–CA3 network,” Nature Computational Science, vol. 1, no. 12. Springer Nature, pp. 830–842, 2021.

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)

2021 | Journal Article | IST-REx-ID: 9887 |

A. J. Johnson et al., “The TPLATE complex mediates membrane bending during plant clathrin-mediated endocytosis,” Proceedings of the National Academy of Sciences, vol. 118, no. 51. National Academy of Sciences, 2021.

2021 | Journal Article | IST-REx-ID: 10655 |

M. E. Maes, G. M. Wögenstein, G. Colombo, R. Casado Polanco, and S. Siegert, “Optimizing AAV2/6 microglial targeting identified enhanced efficiency in the photoreceptor degenerative environment,” Molecular Therapy - Methods and Clinical Development, vol. 23. Elsevier, pp. 210–224, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Conference Paper | IST-REx-ID: 11458 |

E.-A. Peste, E. B. Iofinova, A. Vladu, and D.-A. Alistarh, “AC/DC: Alternating Compressed/DeCompressed training of deep neural networks,” in 35th Conference on Neural Information Processing Systems, Virtual, Online, 2021, vol. 34, pp. 8557–8570.

[Published Version] View | Files available | Download Published Version (ext.) | arXiv

2021 | Journal Article | IST-REx-ID: 10535 |

K. Bodova, E. Szep, and N. H. Barton, “Dynamic maximum entropy provides accurate approximation of structured population dynamics,” PLoS Computational Biology, vol. 17, no. 12. Public Library of Science, 2021.

2021 | Journal Article | IST-REx-ID: 9928 |

M. Peruzzo et al., “Geometric superinductance qubits: Controlling phase delocalization across a single Josephson junction,” PRX Quantum, vol. 2, no. 4. American Physical Society, p. 040341, 2021.

[Published Version] View | Files available | DOI | WoS | arXiv

2021 | Thesis | IST-REx-ID: 10303 |

R. Abualia, “Role of hormones in nitrate regulated growth,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Thesis | IST-REx-ID: 10307 |

K. Tomasek, “Pathogenic Escherichia coli hijack the host immune response,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 10223 |

L. Li et al., “Cell surface and intracellular auxin signalling for H⁺ fluxes in root growth,” Nature, vol. 599, no. 7884. Springer Nature, pp. 273–277, 2021.

2021 | Journal Article | IST-REx-ID: 10321 |

N. Amberg and S. Hippenmeyer, “Genetic mosaic dissection of candidate genes in mice using mosaic analysis with double markers,” STAR Protocols, vol. 2, no. 4. Cell Press, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 10290 |

G. A. Dimchev, B. Amiri, F. Fäßler, M. Falcke, and F. K. Schur, “Computational toolbox for ultrastructural quantitative analysis of filament networks in cryo-ET data,” Journal of Structural Biology, vol. 213, no. 4. Elsevier , 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Thesis | IST-REx-ID: 10199 |

V. Toman, “Improved verification techniques for concurrent systems,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Book Chapter | IST-REx-ID: 10268

L. Hörmayer, J. Friml, and M. Glanc, “Automated time-lapse imaging and manipulation of cell divisions in Arabidopsis roots by vertical-stage confocal microscopy,” in Plant Cell Division, vol. 2382, Humana Press, 2021, pp. 105–114.

View | DOI | PubMed | Europe PMC

2021 | Preprint | IST-REx-ID: 10316 |

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2021 | Journal Article | IST-REx-ID: 10146

I. Vercellino and L. A. Sazanov, “Structure and assembly of the mammalian mitochondrial supercomplex CIII₂CIV,” Nature, vol. 598, no. 7880. Springer Nature, pp. 364–367, 2021.

2021 | Journal Article | IST-REx-ID: 9376 |

R. Zhang, T. Auzinger, and B. Bickel, “Computational design of planar multistable compliant structures,” ACM Transactions on Graphics, vol. 40, no. 5. Association for Computing Machinery, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Thesis | IST-REx-ID: 10058 |

D. Jirovec, “Singlet-Triplet qubits and spin-orbit interaction in 2-dimensional Ge hole gases,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Thesis | IST-REx-ID: 10030 |

L. Portinale, “Discrete-to-continuum limits of transport problems and gradient flows in the space of measures,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 10166 |

A. K. Huylmans, A. Macon, F. Hontoria, and B. Vicoso, “Transitions to asexuality and evolution of gene expression in Artemia brine shrimp,” Proceedings of the Royal Society B: Biological Sciences, vol. 288, no. 1959. The Royal Society, 2021.

2021 | Journal Article | IST-REx-ID: 10073 |

C. Chang and M. Ibáñez, “Enhanced thermoelectric performance by surface engineering in SnTe-PbS nanocomposites,” Materials, vol. 14, no. 18. MDPI, 2021.

2021 | Thesis | IST-REx-ID: 9992 |

L. Hörmayer, “Wound healing in the Arabidopsis root meristem,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Preprint | IST-REx-ID: 10095 |

L. Li et al., “Cell surface and intracellular auxin signalling for H+-fluxes in root growth,” Research Square. .

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2021 | Thesis | IST-REx-ID: 9920 |

M. Peruzzo, “Geometric superinductors and their applications in circuit quantum electrodynamics,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 9818 |

G. Sperl, R. Narain, and C. Wojtan, “Mechanics-aware deformation of yarn pattern geometry,” ACM Transactions on Graphics, vol. 40, no. 4. Association for Computing Machinery, 2021.

[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS

2021 | Journal Article | IST-REx-ID: 9907 |

N. Labajová, N. S. Baranova, M. Jurásek, R. Vácha, M. Loose, and I. Barák, “Cardiolipin-containing lipid membranes attract the bacterial cell division protein diviva,” International Journal of Molecular Sciences, vol. 22, no. 15. MDPI, 2021.

2021 | Journal Article | IST-REx-ID: 8909 |

D. Jirovec et al., “A singlet triplet hole spin qubit in planar Ge,” Nature Materials, vol. 20, no. 8. Springer Nature, pp. 1106–1112, 2021.

2021 | Thesis | IST-REx-ID: 9728 |

N. Agrawal, “Transition to turbulence and drag reduction in particle-laden pipe flows,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Preprint | IST-REx-ID: 10066 |

Severin B, Lennon DT, Camenzind LC, Vigneau F, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, Kruijf M de, Carballido MJ, Svab S, Kuhlmann AV, Braakman FR, Geyer S, Froning FNM, Moon H, Osborne MA, Sejdinovic D, Katsaros G, Zumbühl DM, Briggs GAD, Ares N. Cross-architecture tuning of silicon and SiGe-based quantum devices using machine learning. arXiv, 2107.12975.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2021 | Preprint | IST-REx-ID: 10029 |

D. T. Phan et al., “Breakdown of induced p±ip pairing in a superconductor-semiconductor hybrid,” arXiv. .

[Preprint] View | Files available | Download Preprint (ext.) | arXiv

2021 | Journal Article | IST-REx-ID: 9642 |

A. Venturino et al., “Microglia enable mature perineuronal nets disassembly upon anesthetic ketamine exposure or 60-Hz light entrainment in the healthy brain,” Cell Reports, vol. 36, no. 1. Elsevier, 2021.

2021 | Journal Article | IST-REx-ID: 8910 |

M. Valentini et al., “Nontopological zero-bias peaks in full-shell nanowires induced by flux-tunable Andreev states,” Science, vol. 373, no. 6550. American Association for the Advancement of Science, 2021.

2021 | Thesis | IST-REx-ID: 9623 |

S. Caballero Mancebo, “Fertilization-induced deformations are controlled by the actin cortex and a mitochondria-rich subcortical layer in ascidian oocytes,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 9603 |

X. Contreras et al., “A genome-wide library of MADM mice for single-cell genetic mosaic analysis,” Cell Reports, vol. 35, no. 12. Cell Press, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 10167 |

M. N. Elkrewi, M. A. Moldovan, M. A. L. Picard, and B. Vicoso, “Schistosome W-Linked genes inform temporal dynamics of sex chromosome evolution and suggest candidate for sex determination,” Molecular Biology and Evolution. Oxford University Press , 2021.

2021 | Journal Article | IST-REx-ID: 9558 |

G. Yalniz, B. Hof, and N. B. Budanur, “Coarse graining the state space of a turbulent flow using periodic orbits,” Physical Review Letters, vol. 126, no. 24. American Physical Society, 2021.

2021 | Journal Article | IST-REx-ID: 9540 |

M. Prattes et al., “Structural basis for inhibition of the AAA-ATPase Drg1 by diazaborine,” Nature Communications, vol. 12, no. 1. Springer Nature, 2021.

2021 | Journal Article | IST-REx-ID: 9449 |

D. Jirovec et al., “A singlet-triplet hole spin qubit in planar Ge,” Nature Materials. Springer Nature, 2021.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | arXiv

2021 | Journal Article | IST-REx-ID: 9438 |

D. H. Vandael, Y. Okamoto, C. Borges Merjane, V. M. Vargas Barroso, B. Suter, and P. M. Jonas, “Subcellular patch-clamp techniques for single-bouton stimulation and simultaneous pre- and postsynaptic recording at cortical synapses,” Nature Protocols, vol. 16, no. 6. Springer Nature, pp. 2947–2967, 2021.

2021 | Thesis | IST-REx-ID: 9562 |

D. Kleindienst, “2B or not 2B: Hippocampal asymmetries mediated by NMDA receptor subunit GluN2B C-terminus and high-throughput image analysis by Deep-Learning,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 9287 |

M. Narasimhan et al., “Systematic analysis of specific and nonspecific auxin effects on endocytosis and trafficking,” Plant Physiology, vol. 186, no. 2. Oxford University Press, pp. 1122–1142, 2021.

2021 | Thesis | IST-REx-ID: 9418 |

M. Phuong, “Underspecification in deep learning,” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 9431 |

M. Obr et al., “Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer,” Nature Communications, vol. 12, no. 1. Nature Research, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 9429 |

J. Morandell et al., “Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development,” Nature Communications, vol. 12, no. 1. Springer Nature, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 9778 |

D. H. Vandael, Y. Okamoto, and P. M. Jonas, “Transsynaptic modulation of presynaptic short-term plasticity in hippocampal mossy fiber synapses,” Nature Communications, vol. 12, no. 1. Springer, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 10559 |

K. Aggarwal et al., “Enhancement of proximity-induced superconductivity in a planar Ge hole gas,” Physical Review Research, vol. 3, no. 2. American Physical Society, 2021.

[Published Version] View | Files available | DOI | arXiv

2021 | Journal Article | IST-REx-ID: 9330 |

C. L. Schöpf et al., “Presynaptic α2δ subunits are key organizers of glutamatergic synapses,” PNAS, vol. 118, no. 14. National Academy of Sciences, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 9301 |

C. Prehal et al., “In situ small-angle X-ray scattering reveals solution phase discharge of Li–O2 batteries with weakly solvating electrolytes,” Proceedings of the National Academy of Sciences, vol. 118, no. 14. National Academy of Sciences, 2021.

[Preprint] View | DOI | Download Preprint (ext.) | WoS

2021 | Journal Article | IST-REx-ID: 9316 |

N. Petridou, B. Corominas-Murtra, C.-P. J. Heisenberg, and E. B. Hannezo, “Rigidity percolation uncovers a structural basis for embryonic tissue phase transitions,” Cell, vol. 184, no. 7. Elsevier, p. 1914–1928.e19, 2021.

2021 | Journal Article | IST-REx-ID: 9205 |

D. Kampjut, J. Steiner, and L. A. Sazanov, “Cryo-EM grid optimization for membrane proteins,” iScience, vol. 24, no. 3. Elsevier, 2021.

2021 | Journal Article | IST-REx-ID: 9250 |

Y. K. Petit et al., “Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation,” Nature Chemistry, vol. 13, no. 5. Springer Nature, pp. 465–471, 2021.

2021 | Journal Article | IST-REx-ID: 9290 |

M. Glanc et al., “AGC kinases and MAB4/MEL proteins maintain PIN polarity by limiting lateral diffusion in plant cells,” Current Biology, vol. 31, no. 9. Elsevier, pp. 1918–1930, 2021.

2021 | Journal Article | IST-REx-ID: 9329 |

X. Zhang, A. Schlögl, D. H. Vandael, and P. M. Jonas, “MOD: A novel machine-learning optimal-filtering method for accurate and efficient detection of subthreshold synaptic events in vivo,” Journal of Neuroscience Methods, vol. 357, no. 6. Elsevier, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Book Chapter | IST-REx-ID: 9245

P. Xia and C.-P. J. Heisenberg, “Quantifying tissue tension in the granulosa layer after laser surgery,” in Germline Development in the Zebrafish, vol. 2218, R. Dosch, Ed. Humana, 2021, pp. 117–128.

View | DOI | PubMed | Europe PMC

2021 | Preprint | IST-REx-ID: 9238 |

S. Emtenani et al., “A genetic program boosts mitochondrial function to power macrophage tissue invasion,” bioRxiv. .

[Preprint] View | DOI | Download Preprint (ext.)

2021 | Journal Article | IST-REx-ID: 9168 |

C. Fraisse and H. Sachdeva, “The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes,” Genetics, vol. 217, no. 2. Genetics Society of America, 2021.

[Published Version] View | DOI | Download Published Version (ext.) | WoS

2021 | Journal Article | IST-REx-ID: 9010 |

K. Ötvös et al., “Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport,” EMBO Journal, vol. 40, no. 3. Embo Press, 2021.

2021 | Journal Article | IST-REx-ID: 8931 |

Z. Gelová et al., “Developmental roles of auxin binding protein 1 in Arabidopsis thaliana,” Plant Science, vol. 303. Elsevier, 2021.

2021 | Journal Article | IST-REx-ID: 8988 |

C. F. Düllberg, A. Auer, N. Canigova, K. Loibl, and M. Loose, “In vitro reconstitution reveals phosphoinositides as cargo-release factors and activators of the ARF6 GAP ADAP1,” PNAS, vol. 118, no. 1. National Academy of Sciences, 2021.

2021 | Journal Article | IST-REx-ID: 8582 |

H. Li et al., “Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana,” New Phytologist, vol. 229, no. 1. Wiley, pp. 351–369, 2021.

[Published Version] View | Files available | DOI | WoS

2021 | Research Data | IST-REx-ID: 9389 |

M. Valentini, “Research data for ‘Non-topological zero bias peaks in full-shell nanowires induced by flux tunable Andreev states.’” Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2020 | Thesis | IST-REx-ID: 8983 |

S. Emtenani, “Metabolic regulation of Drosophila macrophage tissue invasion,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 8971 |

F. Fäßler, G. A. Dimchev, V.-V. Hodirnau, W. Wan, and F. K. Schur, “Cryo-electron tomography structure of Arp2/3 complex in cells reveals new insights into the branch junction,” Nature Communications, vol. 11. Springer Nature, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 8957

B. G. Godard et al., “Apical relaxation during mitotic rounding promotes tension-oriented cell division,” Developmental Cell, vol. 55, no. 6. Elsevier, pp. 695–706, 2020.

2020 | Journal Article | IST-REx-ID: 8978 |

S. Laukoter, N. Amberg, F. Pauler, and S. Hippenmeyer, “Generation and isolation of single cells from mouse brain with mosaic analysis with double markers-induced uniparental chromosome disomy,” STAR Protocols, vol. 1, no. 3. Elsevier, 2020.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2020 | Preprint | IST-REx-ID: 8831 |

K. Aggarwal et al., “Enhancement of proximity induced superconductivity in planar Germanium,” arXiv. .

[Submitted Version] View | Files available | arXiv

2020 | Journal Article | IST-REx-ID: 8943 |

S. Tan et al., “Non-steroidal anti-inflammatory drugs target TWISTED DWARF1-regulated actin dynamics and auxin transport-mediated plant development,” Cell Reports, vol. 33, no. 9. Elsevier, 2020.

2020 | Journal Article | IST-REx-ID: 8586 |

F. Fäßler, B. Zens, R. Hauschild, and F. K. Schur, “3D printed cell culture grid holders for improved cellular specimen preparation in cryo-electron microscopy,” Journal of Structural Biology, vol. 212, no. 3. Elsevier, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 8562 |

K. Gavriil et al., “Computational design of cold bent glass façades,” ACM Transactions on Graphics, vol. 39, no. 6. Association for Computing Machinery, 2020.

[Submitted Version] View | Files available | DOI | WoS | arXiv

2020 | Journal Article | IST-REx-ID: 9114 |

W. J. Hease et al., “Bidirectional electro-optic wavelength conversion in the quantum ground state,” PRX Quantum, vol. 1, no. 2. American Physical Society, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Research Data | IST-REx-ID: 8761 |

R. Guseinov, “Supplementary data for ‘Computational design of cold bent glass façades.’” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Preprint | IST-REx-ID: 9750 |

J. Slovakova et al., “Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion,” bioRxiv. Cold Spring Harbor Laboratory, 2020.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2020 | Journal Article | IST-REx-ID: 8581

G. Pinke, L. Zhou, and L. A. Sazanov, “Cryo-EM structure of the entire mammalian F-type ATP synthase,” Nature Structural and Molecular Biology, vol. 27, no. 11. Springer Nature, pp. 1077–1085, 2020.

2020 | Journal Article | IST-REx-ID: 8737 |

D. Kampjut and L. A. Sazanov, “The coupling mechanism of mammalian respiratory complex I,” Science, vol. 370, no. 6516. American Association for the Advancement of Science, 2020.

2020 | Journal Article | IST-REx-ID: 8721 |

J. Hajny et al., “Receptor kinase module targets PIN-dependent auxin transport during canalization,” Science, vol. 370, no. 6516. American Association for the Advancement of Science, pp. 550–557, 2020.

2020 | Journal Article | IST-REx-ID: 8755 |

M. Peruzzo, A. Trioni, F. Hassani, M. Zemlicka, and J. M. Fink, “Surpassing the resistance quantum with a geometric superinductor,” Physical Review Applied, vol. 14, no. 4. American Physical Society, 2020.

[Published Version] View | Files available | DOI | WoS | arXiv

2020 | Thesis | IST-REx-ID: 8657 |

B. Kavcic, “Perturbations of protein synthesis: from antibiotics to genetics and physiology,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Thesis | IST-REx-ID: 8620 |

J. Morandell, “Illuminating the role of Cul3 in autism spectrum disorder pathogenesis,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Thesis | IST-REx-ID: 8589 |

H. Han, “Novel insights into PIN polarity regulation during Arabidopsis development,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 8162 |

S. Laukoter et al., “Cell-type specificity of genomic imprinting in cerebral cortex,” Neuron, vol. 107, no. 6. Elsevier, p. 1160–1179.e9, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 8261 |

X. Zhang, A. Schlögl, and P. M. Jonas, “Selective routing of spatial information flow from input to output in hippocampal granule cells,” Neuron, vol. 107, no. 6. Elsevier, pp. 1212–1225, 2020.

2020 | Thesis | IST-REx-ID: 8366 |

R. Guseinov, “Computational design of curved thin shells: From glass façades to programmable matter,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Preprint | IST-REx-ID: 8557 |

V. Belyaeva et al., “Cortical actin properties controlled by Drosophila Fos aid macrophage infiltration against surrounding tissue resistance,” bioRxiv. .

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2020 | Thesis | IST-REx-ID: 8386 |

R. Zhang, “Structure-aware computational design and its application to 3D printable volume scattering, mechanism, and multistability,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Thesis | IST-REx-ID: 8390 |

A. Royer, “Leveraging structure in Computer Vision tasks for flexible Deep Learning models,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Thesis | IST-REx-ID: 8358 |

P. R. Dos Santos Caldas, “Organization and dynamics of treadmilling filaments in cytoskeletal networks of FtsZ and its crosslinkers,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Thesis | IST-REx-ID: 8353 |

J. Steiner, “Biochemical and structural investigation of the Mrp antiporter, an ancestor of complex I,” Institute of Science and Technology Austria, 2020.

View | Files available | DOI

2020 | Thesis | IST-REx-ID: 8340 |

D. Kampjut, “Molecular mechanisms of mitochondrial redox-coupled proton pumping enzymes,” Institute of Science and Technology Austria, 2020.

View | Files available | DOI

2020 | Thesis | IST-REx-ID: 8350 |

S. Shamipour, “Bulk actin dynamics drive phase segregation in zebrafish oocytes ,” Institute of Science and Technology Austria, 2020.

View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 8529 |

G. M. Arnold et al., “Converting microwave and telecom photons with a silicon photonic nanomechanical interface,” Nature Communications, vol. 11. Springer Nature, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Thesis | IST-REx-ID: 8341 |

U. Bezeljak, “In vitro reconstitution of a Rab activation switch,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 15061 |

N. Pinotsis et al., “Calcium modulates the domain flexibility and function of an α-actinin similar to the ancestral α-actinin,” Proceedings of the National Academy of Sciences, vol. 117, no. 36. Proceedings of the National Academy of Sciences, pp. 22101–22112, 2020.

[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC

2020 | Journal Article | IST-REx-ID: 8142 |

J. C. Montesinos López et al., “Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage,” The Embo Journal, vol. 39, no. 17. Embo Press, 2020.

2020 | Journal Article | IST-REx-ID: 8336 |

K. Kubiasova et al., “Cytokinin fluoroprobe reveals multiple sites of cytokinin perception at plasma membrane and endoplasmic reticulum,” Nature Communications, vol. 11. Springer Nature, 2020.

2020 | Journal Article | IST-REx-ID: 8337 |

I. Antoniadi et al., “Cell-surface receptors enable perception of extracellular cytokinins,” Nature Communications, vol. 11. Springer Nature, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 8139 |

A. J. Johnson et al., “Experimental toolbox for quantitative evaluation of clathrin-mediated endocytosis in the plant model Arabidopsis,” Journal of Cell Science, vol. 133, no. 15. The Company of Biologists, 2020.

2020 | Journal Article | IST-REx-ID: 8001 |

D. H. Vandael, C. Borges Merjane, X. Zhang, and P. M. Jonas, “Short-term plasticity at hippocampal mossy fiber synapses is induced by natural activity patterns and associated with vesicle pool engram formation,” Neuron, vol. 107, no. 3. Elsevier, pp. 509–521, 2020.

2020 | Journal Article | IST-REx-ID: 8284 |

J. Steiner and L. A. Sazanov, “Structure and mechanism of the Mrp complex, an ancient cation/proton antiporter,” eLife, vol. 9. eLife Sciences Publications, 2020.

2020 | Research Data | IST-REx-ID: 8097 |

B. Kavcic, “Analysis scripts and research data for the paper ‘Mechanisms of drug interactions between translation-inhibiting antibiotics.’” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Conference Paper | IST-REx-ID: 8724 |

N. H. Konstantinov, E. Frantar, D.-A. Alistarh, and C. Lampert, “On the sample complexity of adversarial multi-source PAC learning,” in Proceedings of the 37th International Conference on Machine Learning, Online, 2020, vol. 119, pp. 5416–5425.

[Published Version] View | Files available | arXiv

2020 | Journal Article | IST-REx-ID: 8535 |

T. Skrivan, A. Soderstrom, J. Johansson, C. Sprenger, K. Museth, and C. Wojtan, “Wave curves: Simulating Lagrangian water waves on dynamically deforming surfaces,” ACM Transactions on Graphics, vol. 39, no. 4. Association for Computing Machinery, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 8384 |

S. Ishida, P. Synak, F. Narita, T. Hachisuka, and C. Wojtan, “A model for soap film dynamics with evolving thickness,” ACM Transactions on Graphics, vol. 39, no. 4. Association for Computing Machinery, 2020.

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.) | WoS

2020 | Journal Article | IST-REx-ID: 8385 |

G. Sperl, R. Narain, and C. Wojtan, “Homogenized yarn-level cloth,” ACM Transactions on Graphics, vol. 39, no. 4. Association for Computing Machinery, 2020.

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.) | WoS

2020 | Conference Paper | IST-REx-ID: 8188 |

P. M. Henderson and C. Lampert, “Unsupervised object-centric video generation and decomposition in 3D,” in 34th Conference on Neural Information Processing Systems, Vancouver, Canada, 2020, vol. 33, pp. 3106–3117.

[Preprint] View | Download Preprint (ext.) | arXiv

2020 | Journal Article | IST-REx-ID: 8002 |

L. Hörmayer, J. C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, and J. Friml, “Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots,” Proceedings of the National Academy of Sciences, vol. 117, no. 26. Proceedings of the National Academy of Sciences, 2020.

2020 | Thesis | IST-REx-ID: 8032 |

K. Huszár, “Combinatorial width parameters for 3-dimensional manifolds,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 7885

A. Reversat et al., “Cellular locomotion using environmental topography,” Nature, vol. 582. Springer Nature, pp. 582–585, 2020.

View | Files available | DOI | WoS

2020 | Preprint | IST-REx-ID: 8545 |

X. Contreras et al., “A genome-wide library of MADM mice for single-cell genetic mosaic analysis,” bioRxiv. Cold Spring Harbor Laboratory, 2020.

[Preprint] View | DOI | Download Preprint (ext.)

2020 | Thesis | IST-REx-ID: 7902 |

X. Contreras, “Genetic dissection of neural development in health and disease at single cell resolution,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 7875 |

A. Kopf et al., “Microtubules control cellular shape and coherence in amoeboid migrating cells,” The Journal of Cell Biology, vol. 219, no. 6. Rockefeller University Press, 2020.

2020 | Journal Article | IST-REx-ID: 5681 |

I. Hikaru, C. Wojtan, N. Thuerey, T. Igarashi, and R. Ando, “Simulating liquids on dynamically warping grids,” IEEE Transactions on Visualization and Computer Graphics, vol. 26, no. 6. IEEE, pp. 2288–2302, 2020.

2020 | Journal Article | IST-REx-ID: 8203 |

G. Katsaros et al., “Zero field splitting of heavy-hole states in quantum dots,” Nano Letters, vol. 20, no. 7. American Chemical Society, pp. 5201–5206, 2020.

2020 | Journal Article | IST-REx-ID: 7814 |

R. J. Beattie, S. Hippenmeyer, and F. Pauler, “SCOPES: Sparking curiosity through Open-Source platforms in education and science,” Frontiers in Education, vol. 5. Frontiers Media, 2020.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 7815 |

R. J. Beattie et al., “Lineage tracing and clonal analysis in developing cerebral cortex using mosaic analysis with double markers (MADM),” Journal of Visual Experiments, no. 159. MyJove Corporation, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 7600 |

S. Tan et al., “The lipid code-dependent phosphoswitch PDK1–D6PK activates PIN-mediated auxin efflux in Arabidopsis,” Nature Plants, vol. 6. Springer Nature, pp. 556–569, 2020.

2020 | Journal Article | IST-REx-ID: 7805 |

Hurny A, Cuesta C, Cavallari N, Ötvös K, Duclercq J, Dokládal L, Montesinos López JC, Gallemi M, Semerádová H, Rauter T, Stenzel I, Persiau G, Benade F, Bhalearo R, Sýkorová E, Gorzsás A, Sechet J, Mouille G, Heilmann I, De Jaeger G, Ludwig-Müller J, Benková E. 2020. Synergistic on Auxin and Cytokinin 1 positively regulates growth and attenuates soil pathogen resistance. Nature Communications. 11, 2170.

2020 | Journal Article | IST-REx-ID: 7619 |

X. Zhang et al., “Arabidopsis flippases cooperate with ARF GTPase exchange factors to regulate the trafficking and polarity of PIN auxin transporters,” The Plant Cell, vol. 32, no. 5. American Society of Plant Biologists, pp. 1644–1664, 2020.

2020 | Journal Article | IST-REx-ID: 8765 |

C. Schreck and C. Wojtan, “A practical method for animating anisotropic elastoplastic materials,” Computer Graphics Forum, vol. 39, no. 2. Wiley, pp. 89–99, 2020.

[Submitted Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 7541 |

F. Gao et al., “Site-controlled uniform Ge/Si hut wires with electrically tunable spin-orbit coupling,” Advanced Materials, vol. 32, no. 16. Wiley, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 7472 |

K. Käfer, M. Nardin, K. Blahna, and J. L. Csicsvari, “Replay of behavioral sequences in the medial prefrontal cortex during rule switching,” Neuron, vol. 106, no. 1. Elsevier, p. P154–165.e6, 2020.

2020 | Journal Article | IST-REx-ID: 7580 |

U. Bezeljak, H. Loya, B. M. Kaczmarek, T. E. Saunders, and M. Loose, “Stochastic activation and bistability in a Rab GTPase regulatory network,” Proceedings of the National Academy of Sciences, vol. 117, no. 12. Proceedings of the National Academy of Sciences, pp. 6504–6549, 2020.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS

2020 | Journal Article | IST-REx-ID: 7343 |

B. Milutinovic, M. Stock, A. V. Grasse, E. Naderlinger, C. Hilbe, and S. Cremer, “Social immunity modulates competition between coinfecting pathogens,” Ecology Letters, vol. 23, no. 3. Wiley, pp. 565–574, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Thesis | IST-REx-ID: 7525 |

P. Bhandari, “Localization and functional role of Cav2.3 in the medial habenula to interpeduncular nucleus pathway,” Institute of Science and Technology Austria, 2020.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 7427 |

S. Tan et al., “Salicylic acid targets protein phosphatase 2A to attenuate growth in plants,” Current Biology, vol. 30, no. 3. Cell Press, p. 381–395.e8, 2020.

2020 | Journal Article | IST-REx-ID: 7464 |

R. A. Dick et al., “Structures of immature EIAV Gag lattices reveal a conserved role for IP6 in lentivirus assembly,” PLOS Pathogens, vol. 16, no. 1. Public Library of Science, 2020.

2020 | Research Data Reference | IST-REx-ID: 9723 |

R. A. Dick et al., “Structures of immature EIAV Gag lattices reveal a conserved role for IP6 in lentivirus assembly.” Public Library of Science , 2020.

[Published Version] View | Files available | DOI | Download Published Version (ext.)

2020 | Journal Article | IST-REx-ID: 7490 |

M. Narasimhan et al., “Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants,” eLife, vol. 9. eLife Sciences Publications, 2020.

2020 | Preprint | IST-REx-ID: 7800 |

J. Morandell et al., “Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development,” bioRxiv. Cold Spring Harbor Laboratory.

[Preprint] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 7253 |

S. Laukoter, R. J. Beattie, F. Pauler, N. Amberg, K. I. Nakayama, and S. Hippenmeyer, “Imprinted Cdkn1c genomic locus cell-autonomously promotes cell survival in cerebral cortex development,” Nature Communications, vol. 11. Springer Nature, 2020.

[Published Version] View | Files available | DOI | WoS

2020 | Journal Article | IST-REx-ID: 7252

C. Borges Merjane, O. Kim, and P. M. Jonas, “Functional Electron Microscopy (‘Flash and Freeze’) of Identified Cortical Synapses in Acute Brain Slices,” Neuron. Elsevier BV, 2020.

View | DOI

2019 | Journal Article | IST-REx-ID: 7197 |

P. R. Dos Santos Caldas, M. D. Lopez Pelegrin, D. J. G. Pearce, N. B. Budanur, J. Brugués, and M. Loose, “Cooperative ordering of treadmilling filaments in cytoskeletal networks of FtsZ and its crosslinker ZapA,” Nature Communications, vol. 10. Springer Nature, 2019.

[Published Version] View | Files available | DOI | WoS

2019 | Thesis | IST-REx-ID: 7186 |

C. Schwayer, “Mechanosensation of tight junctions depends on ZO-1 phase separation and flow,” Institute of Science and Technology Austria, 2019.

[Published Version] View | Files available | DOI

2019 | Thesis | IST-REx-ID: 7172 |

M. K. Vasileva, “Molecular mechanisms of endomembrane trafficking in Arabidopsis thaliana,” Institute of Science and Technology Austria, 2019.

[Published Version] View | Files available | DOI

2019 | Journal Article | IST-REx-ID: 7026 |

M. Lukacisin and M. T. Bollenbach, “Emergent gene expression responses to drug combinations predict higher-order drug interactions,” Cell Systems, vol. 9, no. 5. Cell Press, pp. 423-433.e1-e3, 2019.

[Published Version] View | Files available | DOI | WoS

2019 | Journal Article | IST-REx-ID: 6486 |

J. Kühnen, D. Scarselli, and B. Hof, “Relaminarization of pipe flow by means of 3D-printed shaped honeycombs,” Journal of Fluids Engineering, vol. 141, no. 11. ASME, 2019.

2019 | Journal Article | IST-REx-ID: 7001 |

C. Schwayer et al., “Mechanosensation of tight junctions depends on ZO-1 phase separation and flow,” Cell, vol. 179, no. 4. Cell Press, p. 937–952.e18, 2019.

2019 | Preprint | IST-REx-ID: 10065 |

A. C. Hofmann et al., “Assessing the potential of Ge/SiGe quantum dots as hosts for singlet-triplet qubits,” arXiv. .

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2019 | Thesis | IST-REx-ID: 6947 |

F. P. Assen, “Lymph node mechanics: Deciphering the interplay between stroma contractility, morphology and lymphocyte trafficking,” Institute of Science and Technology Austria, 2019.

[Published Version] View | Files available | DOI

2019 | Journal Article | IST-REx-ID: 6978 |

N. B. Budanur, A. Dogra, and B. Hof, “Geometry of transient chaos in streamwise-localized pipe flow turbulence,” Physical Review Fluids, vol. 4, no. 10. American Physical Society, p. 102401, 2019.

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2019 | Journal Article | IST-REx-ID: 6897 |

Q. Zhu, M. Gallemi, J. Pospíšil, P. Žádníková, M. Strnad, and E. Benková, “Root gravity response module guides differential growth determining both root bending and apical hook formation in Arabidopsis,” Development, vol. 146, no. 17. The Company of Biologists, 2019.

2019 | Journal Article | IST-REx-ID: 6848 |

D. Kampjut and L. A. Sazanov, “Structure and mechanism of mitochondrial proton-translocating transhydrogenase,” Nature, vol. 573, no. 7773. Springer Nature, pp. 291–295, 2019.

2019 | Thesis | IST-REx-ID: 6849 |

D. K. Rangel Guerrero, “The role of CCK-interneurons in regulating hippocampal network dynamics,” Institute of Science and Technology Austria, 2019.

[Published Version] View | Files available | DOI

2019 | Journal Article | IST-REx-ID: 6859

L. Zhou and L. A. Sazanov, “Structure and conformational plasticity of the intact Thermus thermophilus V/A-type ATPase,” Science, vol. 365, no. 6455. AAAS, 2019.

2019 | Journal Article | IST-REx-ID: 6442 |

C. Schreck, C. Hafner, and C. Wojtan, “Fundamental solutions for water wave animation,” ACM Transactions on Graphics, vol. 38, no. 4. ACM, 2019.

[Submitted Version] View | Files available | DOI | WoS

2019 | Journal Article | IST-REx-ID: 6755 |

M. A. L. Picard et al., “Dosage compensation throughout the Schistosoma mansoni lifecycle: Specific chromatin landscape of the Z chromosome,” Genome biology and evolution, vol. 11, no. 7. Oxford Academic Press, pp. 1909–1922, 2019.

2019 | Journal Article | IST-REx-ID: 6609 |

S. Barzanjeh et al., “Stationary entangled radiation from micromechanical motion,” Nature, vol. 570. Nature Publishing Group, pp. 480–483, 2019.

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2019 | Journal Article | IST-REx-ID: 6611 |

M. Glanc, M. Fendrych, and J. Friml, “PIN2 polarity establishment in arabidopsis in the absence of an intact cytoskeleton,” Biomolecules, vol. 9, no. 6. MDPI, 2019.

2019 | Thesis | IST-REx-ID: 6546 |

K. Valosková, “The role of a highly conserved major facilitator superfamily member in Drosophila embryonic macrophage migration,” Institute of Science and Technology Austria, 2019.

[Published Version] View | Files available | DOI

2019 | Journal Article | IST-REx-ID: 6508 |

S. Shamipour, R. Kardos, S. Xue, B. Hof, E. B. Hannezo, and C.-P. J. Heisenberg, “Bulk actin dynamics drive phase segregation in zebrafish oocytes,” Cell, vol. 177, no. 6. Elsevier, p. 1463–1479.e18, 2019.

2019 | Thesis | IST-REx-ID: 6392 |

M. Lukacisin, “Quantitative investigation of gene expression principles through combinatorial drug perturbation and theory,” IST Austria, 2019.

[Published Version] View | Files available | DOI

2019 | Thesis | IST-REx-ID: 6435 |

B. E. Casillas Perez, “Collective defenses of garden ants against a fungal pathogen,” Institute of Science and Technology Austria, 2019.

[Published Version] View | Files available | DOI

2019 | Journal Article | IST-REx-ID: 6603 |

P. Marhavá, L. Hörmayer, S. Yoshida, P. Marhavý, E. Benková, and J. Friml, “Re-activation of stem cell pathways for pattern restoration in plant wound healing,” Cell, vol. 177, no. 4, p. 957–969.e13, 2019.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2019 | Journal Article | IST-REx-ID: 6351 |

2019 | Journal Article | IST-REx-ID: 6328 |

J. Renkawitz et al., “Nuclear positioning facilitates amoeboid migration along the path of least resistance,” Nature, vol. 568. Springer Nature, pp. 546–550, 2019.

2019 | Journal Article | IST-REx-ID: 6418 |

A. K. Huylmans, M. A. Toups, A. Macon, W. J. Gammerdinger, and B. Vicoso, “Sex-biased gene expression and dosage compensation on the Artemia franciscana Z-chromosome,” Genome biology and evolution, vol. 11, no. 4. Oxford University Press, pp. 1033–1044, 2019.

[Published Version] View | Files available | DOI | WoS

2019 | Journal Article | IST-REx-ID: 6187 |

K. Valosková et al., “A conserved major facilitator superfamily member orchestrates a subset of O-glycosylation to aid macrophage tissue invasion,” eLife, vol. 8. eLife Sciences Publications, 2019.

[Published Version] View | Files available | DOI | WoS

2019 | Journal Article | IST-REx-ID: 6087 |

P. Xia, D. J. Gütl, V. Zheden, and C.-P. J. Heisenberg, “Lateral inhibition in cell specification mediated by mechanical signals modulating TAZ activity,” Cell, vol. 176, no. 6. Elsevier, p. 1379–1392.e14, 2019.

2019 | Journal Article | IST-REx-ID: 6046 |

K. Mitosch, G. Rieckh, and M. T. Bollenbach, “Temporal order and precision of complex stress responses in individual bacteria,” Molecular systems biology, vol. 15, no. 2. Embo Press, 2019.

2019 | Journal Article | IST-REx-ID: 6025 |

D. Capek, M. Smutny, A. M. Tichy, M. Morri, H. L. Janovjak, and C.-P. J. Heisenberg, “Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling in mesendoderm cell migration,” eLife, vol. 8. eLife Sciences Publications, 2019.

[Published Version] View | Files available | DOI | WoS

2019 | Thesis | IST-REx-ID: 6269 |

M. Narasimhan, “Clathrin-Mediated endocytosis, post-endocytic trafficking and their regulatory controls in plants ,” Institute of Science and Technology Austria, 2019.

[Published Version] View | Files available | DOI

2019 | Journal Article | IST-REx-ID: 5789 |

N. Petridou, S. Grigolon, G. Salbreux, E. B. Hannezo, and C.-P. J. Heisenberg, “Fluidization-mediated tissue spreading by mitotic cell rounding and non-canonical Wnt signalling,” Nature Cell Biology, vol. 21. Nature Publishing Group, pp. 169–178, 2019.

2019 | Journal Article | IST-REx-ID: 7406

C. Mckenzie et al., “Isolation of synaptic vesicles from genetically engineered cultured neurons,” Journal of Neuroscience Methods, vol. 312. Elsevier, pp. 114–121, 2019.

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2018 | Thesis | IST-REx-ID: 6263 |

M. Lukacisinova, “Genetic determinants of antibiotic resistance evolution,” Institute of Science and Technology Austria, 2018.

[Published Version] View | Files available | DOI

2018 | Journal Article | IST-REx-ID: 3 |

E. Deliu et al., “Haploinsufficiency of the intellectual disability gene SETD5 disturbs developmental gene expression and cognition,” Nature Neuroscience, vol. 21, no. 12. Nature Publishing Group, pp. 1717–1727, 2018.

[Submitted Version] View | Files available | DOI | WoS

2018 | Journal Article | IST-REx-ID: 23 |

L. Vukušić, J. Kukucka, H. Watzinger, J. M. Milem, F. Schäffler, and G. Katsaros, “Single-shot readout of hole spins in Ge,” Nano Letters, vol. 18, no. 11. American Chemical Society, pp. 7141–7145, 2018.

2018 | Journal Article | IST-REx-ID: 44 |

C. J. Turner, A. Michailidis, D. A. Abanin, M. Serbyn, and Z. Papić, “Quantum scarred eigenstates in a Rydberg atom chain: Entanglement, breakdown of thermalization, and stability to perturbations,” Physical Review B, vol. 98, no. 15. American Physical Society, 2018.

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2018 | Journal Article | IST-REx-ID: 77 |

H. Watzinger et al., “A germanium hole spin qubit,” Nature Communications, vol. 9, no. 3902. Nature Publishing Group, 2018.

[Published Version] View | Files available | DOI | WoS

2018 | Journal Article | IST-REx-ID: 134 |

S. Jeschke, T. Skrivan, M. Mueller Fischer, N. Chentanez, M. Macklin, and C. Wojtan, “Water surface wavelets,” ACM Transactions on Graphics, vol. 37, no. 4. ACM, 2018.

[Published Version] View | Files available | DOI | WoS

2018 | Journal Article | IST-REx-ID: 15 |

M. Hons et al., “Chemokines and integrins independently tune actin flow and substrate friction during intranodal migration of T cells,” Nature Immunology, vol. 19, no. 6. Nature Publishing Group, pp. 606–616, 2018.

2018 | Journal Article | IST-REx-ID: 308 |

A. Ratheesh et al., “Drosophila TNF modulates tissue tension in the embryo to facilitate macrophage invasive migration,” Developmental Cell, vol. 45, no. 3. Elsevier, pp. 331–346, 2018.

2018 | Thesis | IST-REx-ID: 323 |

A. F. Leithner, “Branched actin networks in dendritic cell biology,” Institute of Science and Technology Austria, 2018.

[Published Version] View | Files available | DOI

2018 | Journal Article | IST-REx-ID: 402 |

M. Brown et al., “Lymph node blood vessels provide exit routes for metastatic tumor cell dissemination in mice,” Science, vol. 359, no. 6382. American Association for the Advancement of Science, pp. 1408–1411, 2018.

2018 | Journal Article | IST-REx-ID: 328 |

G. H. Choueiri, J. M. Lopez Alonso, and B. Hof, “Exceeding the asymptotic limit of polymer drag reduction,” Physical Review Letters, vol. 120, no. 12. American Physical Society, 2018.

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2018 | Journal Article | IST-REx-ID: 326 |

K. Sawada, R. Kawakami, R. Shigemoto, and T. Nemoto, “Super resolution structural analysis of dendritic spines using three-dimensional structured illumination microscopy in cleared mouse brain slices,” European Journal of Neuroscience, vol. 47, no. 9. Wiley, pp. 1033–1042, 2018.

[Published Version] View | Files available | DOI | WoS

2018 | Thesis | IST-REx-ID: 395 |

D.-C. Tarlungeanu, “The branched chain amino acids in autism spectrum disorders ,” Institute of Science and Technology Austria, 2018.

[Published Version] View | Files available | DOI

2018 | Journal Article | IST-REx-ID: 544 |

A. György et al., “Tools allowing independent visualization and genetic manipulation of Drosophila melanogaster macrophages and surrounding tissues,” G3: Genes, Genomes, Genetics, vol. 8, no. 3. Genetics Society of America, pp. 845–857, 2018.

[Published Version] View | Files available | DOI | WoS

2018 | Journal Article | IST-REx-ID: 503

K. Tomasek, T. Bergmiller, and C. C. Guet, “Lack of cations in flow cytometry buffers affect fluorescence signals by reducing membrane stability and viability of Escherichia coli strains,” Journal of Biotechnology, vol. 268. Elsevier, pp. 40–52, 2018.

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2018 | Journal Article | IST-REx-ID: 437 |

A. F. Leithner, J. Renkawitz, I. de Vries, R. Hauschild, H. Haecker, and M. K. Sixt, “Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration,” European Journal of Immunology, vol. 48, no. 6. Wiley-Blackwell, pp. 1074–1077, 2018.

[Published Version] View | Files available | DOI | WoS

2017 | Book Chapter | IST-REx-ID: 1213

N. S. Baranova and M. Loose, “Single-molecule measurements to study polymerization dynamics of FtsZ-FtsA copolymers,” in Cytokinesis, vol. 137, A. Echard, Ed. Academic Press, 2017, pp. 355–370.

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2017 | Journal Article | IST-REx-ID: 749 |

C. Chen, R. Satterfield, S. Young, and P. M. Jonas, “Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses,” Cell Reports, vol. 21, no. 8. Cell Press, pp. 2082–2089, 2017.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 804 |

P. S. Schmalhorst, F. Deluweit, R. Scherrers, C.-P. J. Heisenberg, and M. K. Sikora, “Overcoming the limitations of the MARTINI force field in simulations of polysaccharides,” Journal of Chemical Theory and Computation, vol. 13, no. 10. American Chemical Society, pp. 5039–5053, 2017.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS

2017 | Journal Article | IST-REx-ID: 727

J. Mueller et al., “Load adaptation of lamellipodial actin networks,” Cell, vol. 171, no. 1. Cell Press, pp. 188–200, 2017.

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2017 | Journal Article | IST-REx-ID: 803 |

M. Samwer et al., “DNA cross-bridging shapes a single nucleus from a set of mitotic chromosomes,” Cell, vol. 170, no. 5. Cell Press, pp. 956–972, 2017.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 840 |

L. Vukušić, J. Kukucka, H. Watzinger, and G. Katsaros, “Fast hole tunneling times in germanium hut wires probed by single-shot reflectometry,” Nano Letters, vol. 17, no. 9. American Chemical Society, pp. 5706–5710, 2017.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 470 |

S. Jeschke and C. Wojtan, “Water wave packets,” ACM Transactions on Graphics, vol. 36, no. 4. ACM, 2017.

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 946 |

D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, and J. Friml, “Live tracking of moving samples in confocal microscopy for vertically grown roots,” eLife, vol. 6. eLife Sciences Publications, 2017.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 944

R. J. Beattie et al., “Mosaic analysis with double markers reveals distinct sequential functions of Lgl1 in neural stem cells,” Neuron, vol. 94, no. 3. Cell Press, p. 517–533.e3, 2017.

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2017 | Journal Article | IST-REx-ID: 661 |

M. Smutny et al., “Friction forces position the neural anlage,” Nature Cell Biology, vol. 19. Nature Publishing Group, pp. 306–317, 2017.

2017 | Journal Article | IST-REx-ID: 1067 |

H. Morita, S. Grigolon, M. Bock, G. Krens, G. Salbreux, and C.-P. J. Heisenberg, “The physical basis of coordinated tissue spreading in zebrafish gastrulation,” Developmental Cell, vol. 40, no. 4. Cell Press, pp. 354–366, 2017.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 1087 |

B. Song, D. Barkley, B. Hof, and M. Avila, “Speed and structure of turbulent fronts in pipe flow,” Journal of Fluid Mechanics, vol. 813. Cambridge University Press, pp. 1045–1059, 2017.

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2017 | Journal Article | IST-REx-ID: 1118 |

J. Gan, S.-M. Weng, A. Pernia-Andrade, J. L. Csicsvari, and P. M. Jonas, “Phase-locked inhibition, but not excitation, underlies hippocampal ripple oscillations in awake mice in vivo,” Neuron, vol. 93, no. 2. Elsevier, pp. 308–314, 2017.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 1078 |

D. von Wangenheim, R. Hauschild, and J. Friml, “Light sheet fluorescence microscopy of plant roots growing on the surface of a gel,” Journal of visualized experiments JoVE, vol. 2017, no. 119. Journal of Visualized Experiments, 2017.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 1117 |

C. Chen, itaru Arai, R. Satterield, S. Young, and P. M. Jonas, “Synaptotagmin 2 is the fast Ca2+ sensor at a central inhibitory synapse,” Cell Reports, vol. 18, no. 3. Cell Press, pp. 723–736, 2017.

[Published Version] View | Files available | DOI | WoS

2016 | Journal Article | IST-REx-ID: 1323 |

N. Vyleta, C. Borges Merjane, and P. M. Jonas, “Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses,” eLife, vol. 5. eLife Sciences Publications, 2016.

[Published Version] View | Files available | DOI

2016 | Journal Article | IST-REx-ID: 1321 |

A. F. Leithner et al., “Diversified actin protrusions promote environmental exploration but are dispensable for locomotion of leukocytes,” Nature Cell Biology, vol. 18. Nature Publishing Group, pp. 1253–1259, 2016.

[Submitted Version] View | Files available | DOI

2016 | Journal Article | IST-REx-ID: 1350 |

J. Guzmán, A. Schlögl, M. Frotscher, and P. M. Jonas, “Synaptic mechanisms of pattern completion in the hippocampal CA3 network,” Science, vol. 353, no. 6304. American Association for the Advancement of Science, pp. 1117–1123, 2016.

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2016 | Journal Article | IST-REx-ID: 1271 |

A. Diz Muñoz et al., “Steering cell migration by alternating blebs and actin-rich protrusions,” BMC Biology, vol. 14, no. 1. BioMed Central, 2016.

[Published Version] View | Files available | DOI

2016 | Book Chapter | IST-REx-ID: 1094

H. Harada and R. Shigemoto, “Immunogold protein localization on grid-glued freeze-fracture replicas,” in High-Resolution Imaging of Cellular Proteins, vol. 1474, Springer, 2016, pp. 203–216.

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2016 | Journal Article | IST-REx-ID: 1100 |

K. Sako et al., “Optogenetic control of nodal signaling reveals a temporal pattern of nodal signaling regulating cell fate specification during gastrulation,” Cell Reports, vol. 16, no. 3. Cell Press, pp. 866–877, 2016.

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2016 | Conference Paper | IST-REx-ID: 1363 |

M. Bojsen-Hansen and C. Wojtan, “Generalized non-reflecting boundaries for fluid re-simulation,” presented at the ACM SIGGRAPH, Anaheim, CA, USA, 2016, vol. 35, no. 4.

[Published Version] View | Files available | DOI

2016 | Thesis | IST-REx-ID: 1129 |

J. Schwarz, “Quantitative analysis of haptotactic cell migration,” Institute of Science and Technology Austria, 2016.

[Published Version] View | Files available

2016 | Journal Article | IST-REx-ID: 1492 |

P. Marhavý et al., “Targeted cell elimination reveals an auxin-guided biphasic mode of lateral root initiation,” Genes and Development, vol. 30, no. 4. Cold Spring Harbor Laboratory Press, pp. 471–483, 2016.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2016 | Journal Article | IST-REx-ID: 1599 |

E. Kiermaier et al., “Polysialylation controls dendritic cell trafficking by regulating chemokine recognition,” Science, vol. 351, no. 6269. American Association for the Advancement of Science, pp. 186–190, 2016.

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2016 | Journal Article | IST-REx-ID: 1597

J. Schwarz and M. K. Sixt, “Quantitative analysis of dendritic cell haptotaxis,” Methods in Enzymology, vol. 570. Elsevier, pp. 567–581, 2016.

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2015 | Journal Article | IST-REx-ID: 1537 |

V. Ruprecht et al., “Cortical contractility triggers a stochastic switch to fast amoeboid cell motility,” Cell, vol. 160, no. 4. Cell Press, pp. 673–685, 2015.

[Published Version] View | Files available | DOI

2015 | Journal Article | IST-REx-ID: 1993 |

M. Konrad, A. V. Grasse, S. Tragust, and S. Cremer, “Anti-pathogen protection versus survival costs mediated by an ectosymbiont in an ant host,” Proceedings of the Royal Society of London Series B Biological Sciences, vol. 282, no. 1799. The Royal Society, 2015.

2015 | Journal Article | IST-REx-ID: 1640 |

M. Šimášková et al., “Cytokinin response factors regulate PIN-FORMED auxin transporters,” Nature Communications, vol. 6. Nature Publishing Group, 2015.

[Submitted Version] View | Files available | DOI

2014 | Thesis | IST-REx-ID: 1403

M. Behrndt, “Forces driving epithelial spreading in zebrafish epiboly,” IST Austria, 2014.

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2013 | Journal Article | IST-REx-ID: 2282 |

P. Campinho, M. Behrndt, J. Ranft, T. Risler, N. Minc, and C.-P. J. Heisenberg, “Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading during zebrafish epiboly,” Nature Cell Biology, vol. 15. Nature Publishing Group, pp. 1405–1414, 2013.

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)

2013 | Thesis | IST-REx-ID: 1406

P. Campinho, “Mechanics of zebrafish epiboly: Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading,” Institute of Science and Technology Austria, 2013.

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2013 | Journal Article | IST-REx-ID: 2944

S. Aeschbacher, A. Futschik, and M. Beaumont, “Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates. ,” Molecular Ecology, vol. 22, no. 4. Wiley-Blackwell, pp. 987–1002, 2013.

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2012 | Journal Article | IST-REx-ID: 2962 |

S. Aeschbacher, M. Beaumont, and A. Futschik, “A novel approach for choosing summary statistics in approximate Bayesian computation,” Genetics, vol. 192, no. 3. Genetics Society of America, pp. 1027–1047, 2012.

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2012 | Journal Article | IST-REx-ID: 2950

M. Behrndt et al., “Forces driving epithelial spreading in zebrafish gastrulation,” Science, vol. 338, no. 6104. American Association for the Advancement of Science, pp. 257–260, 2012.

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2012 | Journal Article | IST-REx-ID: 2951

J.-L. Maître et al., “Adhesion functions in cell sorting by mechanically coupling the cortices of adhering cells,” Science, vol. 338, no. 6104. American Association for the Advancement of Science, pp. 253–256, 2012.

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2011 | Journal Article | IST-REx-ID: 3396 |

P. Stockinger, C.-P. J. Heisenberg, and J.-L. Maître, “Defective neuroepithelial cell cohesion affects tangential branchiomotor neuron migration in the zebrafish neural tube,” Development, vol. 138, no. 21. Company of Biologists, pp. 4673–4683, 2011.

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2010 | Journal Article | IST-REx-ID: 4157 |

E. Papusheva and C.-P. J. Heisenberg, “Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis,” EMBO Journal, vol. 29, no. 16. Wiley-Blackwell, pp. 2753–2768, 2010.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC

2022 | Thesis | IST-REx-ID: 11896

C. Artner, “Modulation of auxin transport via ZF proteins adjust plant response to high ambient temperature,” IST Austria , 2022.

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2023 | Research Data | IST-REx-ID: 12373 |

D. Gupta, A. L. Sumser, and M. A. Jösch, “Research Data for: Panoramic visual statistics shape retina-wide organization of receptive fields.” ISTA, 2023.

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