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3756 Publications
2022 | Journal Article | IST-REx-ID: 10767 |

Novel patterns of expression and recruitment of new genes on the t-haplotype, a mouse selfish chromosome
R.K. Kelemen, M.N. Elkrewi, A.K. Lindholm, B. Vicoso, Proceedings of the Royal Society B: Biological Sciences 289 (2022) 20211985.
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R.K. Kelemen, M.N. Elkrewi, A.K. Lindholm, B. Vicoso, Proceedings of the Royal Society B: Biological Sciences 289 (2022) 20211985.
2022 | Journal Article | IST-REx-ID: 10768 |

Auxin canalization: From speculative models toward molecular players
J. Hajny, S. Tan, J. Friml, Current Opinion in Plant Biology 65 (2022).
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J. Hajny, S. Tan, J. Friml, Current Opinion in Plant Biology 65 (2022).
2022 | Journal Article | IST-REx-ID: 10769 |

Non relativistic quantum field theory: Dynamics and irreversibility
L. Daguerre, G. Torroba, R.A. Medina Ramos, M. Solís, Anales de la Asociacion Fisica Argentina 32 (2022) 93–98.
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L. Daguerre, G. Torroba, R.A. Medina Ramos, M. Solís, Anales de la Asociacion Fisica Argentina 32 (2022) 93–98.
2022 | Journal Article | IST-REx-ID: 10770 |

Where do mistakes lead? A survey of games with incompetent players
T. Graham, M. Kleshnina, J.A. Filar, Dynamic Games and Applications (2022).
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T. Graham, M. Kleshnina, J.A. Filar, Dynamic Games and Applications (2022).
2022 | Journal Article | IST-REx-ID: 10771 |

Theory of chirality induced spin selectivity: Progress and challenges
Evers F, Aharony A, Bar-Gill N, Entin-Wohlman O, Hedegård P, Hod O, Jelinek P, Kamieniarz G, Lemeshko M, Michaeli K, Mujica V, Naaman R, Paltiel Y, Refaely-Abramson S, Tal O, Thijssen J, Thoss M, Van Ruitenbeek JM, Venkataraman L, Waldeck DH, Yan B, Kronik L. 2022. Theory of chirality induced spin selectivity: Progress and challenges. Advanced Materials., 2106629.
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Evers F, Aharony A, Bar-Gill N, Entin-Wohlman O, Hedegård P, Hod O, Jelinek P, Kamieniarz G, Lemeshko M, Michaeli K, Mujica V, Naaman R, Paltiel Y, Refaely-Abramson S, Tal O, Thijssen J, Thoss M, Van Ruitenbeek JM, Venkataraman L, Waldeck DH, Yan B, Kronik L. 2022. Theory of chirality induced spin selectivity: Progress and challenges. Advanced Materials., 2106629.
2022 | Journal Article | IST-REx-ID: 10772 |

Mirror symmetry for the Tate curve via tropical and log corals
N.H. Arguez, Journal of the London Mathematical Society (2022).
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| arXiv
N.H. Arguez, Journal of the London Mathematical Society (2022).
2022 | Journal Article | IST-REx-ID: 10773 |

Continuous and discrete radius functions on Voronoi tessellations and Delaunay mosaics
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Discrete and Computational Geometry (2022).
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R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Discrete and Computational Geometry (2022).
2022 | Conference Paper | IST-REx-ID: 10774
Flavors of sequential information flow
E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Springer Nature, 2022, pp. 1–19.
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E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Springer Nature, 2022, pp. 1–19.
2022 | Journal Article | IST-REx-ID: 10775 |

List-decodability with large radius for Reed-Solomon codes
A. Ferber, M.A. Kwan, L. Sauermann, IEEE Transactions on Information Theory (2022).
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A. Ferber, M.A. Kwan, L. Sauermann, IEEE Transactions on Information Theory (2022).
2022 | Journal Article | IST-REx-ID: 10776 |

Barycentric cuts through a convex body
Z. Patakova, M. Tancer, U. Wagner, Discrete and Computational Geometry (2022).
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Z. Patakova, M. Tancer, U. Wagner, Discrete and Computational Geometry (2022).
2022 | Journal Article | IST-REx-ID: 10787 |

The response of a metapopulation to a changing environment
N.H. Barton, O.O. Olusanya, Philosophical Transactions of the Royal Society B: Biological Sciences 377 (2022).
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N.H. Barton, O.O. Olusanya, Philosophical Transactions of the Royal Society B: Biological Sciences 377 (2022).
2022 | Preprint | IST-REx-ID: 10788 |

Integral points of bounded height on a certain toric variety
F.A. Wilsch, ArXiv (n.d.).
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F.A. Wilsch, ArXiv (n.d.).
2022 | Preprint | IST-REx-ID: 10791 |

Tissue-wide effects overrule cell-intrinsic gene function in cortical projection neuron migration
A.H. Hansen, F. Pauler, M. Riedl, C. Streicher, A.-M. Heger, S. Laukoter, C.M. Sommer, A. Nicolas, B. Hof, L.H. Tsai, T. Rülicke, S. Hippenmeyer, BioRxiv (n.d.).
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A.H. Hansen, F. Pauler, M. Riedl, C. Streicher, A.-M. Heger, S. Laukoter, C.M. Sommer, A. Nicolas, B. Hof, L.H. Tsai, T. Rülicke, S. Hippenmeyer, BioRxiv (n.d.).
2022 | Preprint | IST-REx-ID: 10792 |

WDFY3 cell autonomously controls neuronal migration
Z. Schaaf, L. Tat, N. Cannizzaro, R. Green, T. Rülicke, S. Hippenmeyer, K. Zarbalis, (n.d.).
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Z. Schaaf, L. Tat, N. Cannizzaro, R. Green, T. Rülicke, S. Hippenmeyer, K. Zarbalis, (n.d.).
2022 | Journal Article | IST-REx-ID: 10797 |

Orthogonal polynomial duality of boundary driven particle systems and non-equilibrium correlations
S. Floreani, F. Redig, F. Sau, Annales de l’institut Henri Poincare (B) Probability and Statistics 58 (2022) 220–247.
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S. Floreani, F. Redig, F. Sau, Annales de l’institut Henri Poincare (B) Probability and Statistics 58 (2022) 220–247.
2022 | Thesis | IST-REx-ID: 10799 |

Robustness and fairness in machine learning
N.H. Konstantinov, Robustness and Fairness in Machine Learning, IST Austria, 2022.
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N.H. Konstantinov, Robustness and Fairness in Machine Learning, IST Austria, 2022.
2022 | Journal Article | IST-REx-ID: 10812
The physiology and genetics of bacterial responses to antibiotic combinations
R. Römhild, M.T. Bollenbach, D.I. Andersson, Nature Reviews Microbiology (2022).
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R. Römhild, M.T. Bollenbach, D.I. Andersson, Nature Reviews Microbiology (2022).
2022 | Journal Article | IST-REx-ID: 10818 |

Microglia control glutamatergic synapses in the adult mouse hippocampus
Basilico B, Ferrucci L, Ratano P, Golia MT, Grimaldi A, Rosito M, Ferretti V, Reverte I, Sanchini C, Marrone MC, Giubettini M, De Turris V, Salerno D, Garofalo S, St‐Pierre M, Carrier M, Renzi M, Pagani F, Modi B, Raspa M, Scavizzi F, Gross CT, Marinelli S, Tremblay M, Caprioli D, Maggi L, Limatola C, Di Angelantonio S, Ragozzino D. 2022. Microglia control glutamatergic synapses in the adult mouse hippocampus. Glia. 70(1), 173–195.
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Basilico B, Ferrucci L, Ratano P, Golia MT, Grimaldi A, Rosito M, Ferretti V, Reverte I, Sanchini C, Marrone MC, Giubettini M, De Turris V, Salerno D, Garofalo S, St‐Pierre M, Carrier M, Renzi M, Pagani F, Modi B, Raspa M, Scavizzi F, Gross CT, Marinelli S, Tremblay M, Caprioli D, Maggi L, Limatola C, Di Angelantonio S, Ragozzino D. 2022. Microglia control glutamatergic synapses in the adult mouse hippocampus. Glia. 70(1), 173–195.
2022 | Book Chapter | IST-REx-ID: 10820
Effects of streaky structures on the instability of supersonic boundary layers
J. Liu, E. Marensi, X. Wu, in:, S. Sherwin, P. Schmid, X. Wu (Eds.), IUTAM Laminar-Turbulent Transition, 1st ed., Springer Nature, Cham, 2022, pp. 587–598.
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J. Liu, E. Marensi, X. Wu, in:, S. Sherwin, P. Schmid, X. Wu (Eds.), IUTAM Laminar-Turbulent Transition, 1st ed., Springer Nature, Cham, 2022, pp. 587–598.
2022 | Preprint | IST-REx-ID: 10821 |

Alpha rhythm induces attenuation-amplification dynamics in neural activity cascades
F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
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F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
2022 | Journal Article | IST-REx-ID: 10825 |

Cell surface fluctuations regulate early embryonic lineage sorting
A. Yanagida, E. Corujo-Simon, C.K. Revell, P. Sahu, G.G. Stirparo, I.M. Aspalter, A.K. Winkel, R. Peters, H. De Belly, D.A.D. Cassani, S. Achouri, R. Blumenfeld, K. Franze, E.B. Hannezo, E.K. Paluch, J. Nichols, K.J. Chalut, Cell 185 (2022) 777–793.e20.
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A. Yanagida, E. Corujo-Simon, C.K. Revell, P. Sahu, G.G. Stirparo, I.M. Aspalter, A.K. Winkel, R. Peters, H. De Belly, D.A.D. Cassani, S. Achouri, R. Blumenfeld, K. Franze, E.B. Hannezo, E.K. Paluch, J. Nichols, K.J. Chalut, Cell 185 (2022) 777–793.e20.
2022 | Journal Article | IST-REx-ID: 10826 |

Impairing one sensory modality enhances another by reconfiguring peptidergic signalling in Caenorhabditis elegans
G. Valperga, M. de Bono, ELife 11 (2022).
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G. Valperga, M. de Bono, ELife 11 (2022).
2022 | Journal Article | IST-REx-ID: 10827 |

High-pressure phase behaviors of titanium dioxide revealed by a Δ-learning potential
J.G. Lee, C.J. Pickard, B. Cheng, The Journal of Chemical Physics 156 (2022).
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| arXiv
J.G. Lee, C.J. Pickard, B. Cheng, The Journal of Chemical Physics 156 (2022).
2022 | Conference Paper | IST-REx-ID: 10828 |

The impact of changes in resolution on the persistent homology of images
T. Heiss, S. Tymochko, B. Story, A. Garin, H. Bui, B. Bleile, V. Robins, in:, 2021 IEEE International Conference on Big Data, IEEE, 2022, pp. 3824–3834.
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T. Heiss, S. Tymochko, B. Story, A. Garin, H. Bui, B. Bleile, V. Robins, in:, 2021 IEEE International Conference on Big Data, IEEE, 2022, pp. 3824–3834.
2022 | Journal Article | IST-REx-ID: 10829 |

Field-effect transistor with a plasmonic fiber optic gate electrode as a multivariable biosensor device
R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, ACS Sensors 7 (2022) 504–512.
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R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, ACS Sensors 7 (2022) 504–512.
2022 | Research Data Reference | IST-REx-ID: 10833
Field-effect transistor with a plasmonic fiber optic gate electrode as a multivariable biosensor device
R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, (2022).
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R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, (2022).
2022 | Journal Article | IST-REx-ID: 10841
Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components
D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman, W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van Damme, J. Pan, S. Bednarek, Plant Cell (2022).
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| DOI
| PubMed | Europe PMC
D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman, W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van Damme, J. Pan, S. Bednarek, Plant Cell (2022).
2022 | Journal Article | IST-REx-ID: 10845 |

Impurity with a resonance in the vicinity of the Fermi energy
M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
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| arXiv
M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
2022 | Journal Article | IST-REx-ID: 10846
MON-2, a Golgi protein, promotes longevity by upregulating autophagy through mediating inter-organelle communications
M. Artan, J. Sohn, C. Lee, S.Y. Park, S.J.V. Lee, Autophagy (2022).
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| PubMed | Europe PMC
M. Artan, J. Sohn, C. Lee, S.Y. Park, S.J.V. Lee, Autophagy (2022).
2022 | Journal Article | IST-REx-ID: 10850 |

Two-particle bound states at interfaces and corners
B. Roos, R. Seiringer, Journal of Functional Analysis 282 (n.d.).
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B. Roos, R. Seiringer, Journal of Functional Analysis 282 (n.d.).
2022 | Journal Article | IST-REx-ID: 10851
Detecting induced p±ip pairing at the Al-InAs interface with a quantum microwave circuit
D.T. Phan, J.L. Senior, A. Ghazaryan, M. Hatefipour, W.M. Strickland, J. Shabani, M. Serbyn, A.P. Higginbotham, Physical Review Letters 128 (2022).
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D.T. Phan, J.L. Senior, A. Ghazaryan, M. Hatefipour, W.M. Strickland, J. Shabani, M. Serbyn, A.P. Higginbotham, Physical Review Letters 128 (2022).
2022 | Journal Article | IST-REx-ID: 10863
Symmetry-allowed nonlinear orbital response across the topological phase transition in centrosymmetric materials
M. Davydova, M. Serbyn, H. Ishizuka, Physical Review B 105 (2022).
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| DOI
| arXiv
M. Davydova, M. Serbyn, H. Ishizuka, Physical Review B 105 (2022).
2022 | Journal Article | IST-REx-ID: 10887 |

Functional John ellipsoids
G. Ivanov, M. Naszódi, Journal of Functional Analysis 282 (2022).
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| arXiv
G. Ivanov, M. Naszódi, Journal of Functional Analysis 282 (2022).
2022 | Journal Article | IST-REx-ID: 10888 |

Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling
Q. Lu, Y. Zhang, J. Hellner, C. Giannini, X. Xu, J. Pauwels, Q. Ma, W. Dejonghe, H. Han, B. Van De Cotte, F. Impens, K. Gevaert, I. De Smet, J. Friml, D.M. Molina, E. Russinova, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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Q. Lu, Y. Zhang, J. Hellner, C. Giannini, X. Xu, J. Pauwels, Q. Ma, W. Dejonghe, H. Han, B. Van De Cotte, F. Impens, K. Gevaert, I. De Smet, J. Friml, D.M. Molina, E. Russinova, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Journal Article | IST-REx-ID: 10889 |

Electron microscopic visualization of single molecules by tag-mediated metal particle labeling
R. Shigemoto, Microscopy 71 (2022) i72–i80.
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R. Shigemoto, Microscopy 71 (2022) i72–i80.
2022 | Journal Article | IST-REx-ID: 10890 |

The number and distinct clustering patterns of voltage-gated Calcium channels in nerve terminals
K. Eguchi, J.-C. Montanaro-Punzengruber, E. Le Monnier, R. Shigemoto, Frontiers in Neuroanatomy 16 (2022).
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| PubMed | Europe PMC
K. Eguchi, J.-C. Montanaro-Punzengruber, E. Le Monnier, R. Shigemoto, Frontiers in Neuroanatomy 16 (2022).
2022 | Conference Paper | IST-REx-ID: 10891
Quantitative monitoring of software
T.A. Henzinger, in:, R. Bloem (Ed.), Software Verification, Springer Nature, 2022, pp. 3–6.
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| DOI
T.A. Henzinger, in:, R. Bloem (Ed.), Software Verification, Springer Nature, 2022, pp. 3–6.
2022 | Journal Article | IST-REx-ID: 10918 |

Macrophage mitochondrial bioenergetics and tissue invasion are boosted by an Atossa-Porthos axis in Drosophila
S. Emtenani, E.T. Martin, A. György, J. Bicher, J.-W. Genger, T. Köcher, M. Akhmanova, M. Pereira Guarda, M. Roblek, A. Bergthaler, T.R. Hurd, P. Rangan, D.E. Siekhaus, The Embo Journal (2022).
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S. Emtenani, E.T. Martin, A. György, J. Bicher, J.-W. Genger, T. Köcher, M. Akhmanova, M. Pereira Guarda, M. Roblek, A. Bergthaler, T.R. Hurd, P. Rangan, D.E. Siekhaus, The Embo Journal (2022).
2022 | Journal Article | IST-REx-ID: 10920 |

Dynamics of hole singlet-triplet qubits with large g-factor differences
D. Jirovec, P.M. Mutter, A.C. Hofmann, A. Crippa, M. Rychetsky, D.L. Craig, J. Kukucka, F. Martins, A. Ballabio, N. Ares, D. Chrastina, G. Isella, G. Burkard, G. Katsaros, Physical Review Letters 128 (2022).
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| arXiv
D. Jirovec, P.M. Mutter, A.C. Hofmann, A. Crippa, M. Rychetsky, D.L. Craig, J. Kukucka, F. Martins, A. Ballabio, N. Ares, D. Chrastina, G. Isella, G. Burkard, G. Katsaros, Physical Review Letters 128 (2022).
2022 | Journal Article | IST-REx-ID: 10922 |

Worst-case rigidity analysis and optimization for assemblies with mechanical joints
Z. Liu, J. Hu, H. Xu, P. Song, R. Zhang, B. Bickel, C.-W. Fu, Computer Graphics Forum 41 (2022).
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Z. Liu, J. Hu, H. Xu, P. Song, R. Zhang, B. Bickel, C.-W. Fu, Computer Graphics Forum 41 (2022).
2022 | Journal Article | IST-REx-ID: 10924 |

Quantum-enabled operation of a microwave-optical interface
R. Sahu, W.J. Hease, A.R. Rueda Sanchez, G.M. Arnold, L. Qiu, J.M. Fink, Nature Communications 13 (2022).
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| Files available
| DOI
| arXiv
R. Sahu, W.J. Hease, A.R. Rueda Sanchez, G.M. Arnold, L. Qiu, J.M. Fink, Nature Communications 13 (2022).
2022 | Journal Article | IST-REx-ID: 10926
Very short mountings are enough for sperm transfer in Littorina saxatilis
S. Perini, R. Butlin, A.M. Westram, K. Johannesson, Journal of Molluscan Studies 88 (2022).
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| DOI
S. Perini, R. Butlin, A.M. Westram, K. Johannesson, Journal of Molluscan Studies 88 (2022).
2022 | Journal Article | IST-REx-ID: 10927 |

PaReBrick: PArallel REarrangements and BReaks identification toolkit
A. Zabelkin, Y. Yakovleva, O. Bochkareva, N. Alexeev, Bioinformatics 38 (2022) 357–363.
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A. Zabelkin, Y. Yakovleva, O. Bochkareva, N. Alexeev, Bioinformatics 38 (2022) 357–363.
2022 | Journal Article | IST-REx-ID: 10939 |

Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
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A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
2022 | Journal Article | IST-REx-ID: 10940 |

Magnetic field resilience of three-dimensional transmons with thin-film Al/AlOx/Al Josephson junctions approaching 1 T
J. Krause, C. Dickel, E. Vaal, M. Vielmetter, J. Feng, R. Bounds, G. Catelani, J.M. Fink, Y. Ando, Physical Review Applied 17 (2022).
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| DOI
| Download Preprint (ext.)
| arXiv
J. Krause, C. Dickel, E. Vaal, M. Vielmetter, J. Feng, R. Bounds, G. Catelani, J.M. Fink, Y. Ando, Physical Review Applied 17 (2022).
2022 | Journal Article | IST-REx-ID: 10945 |

pH-dependent coloring of combination effect pigments with anthocyanins from Brassica oleracea var. capitata F. rubra
M.O. Çoruh, G. Gündüz, Ü. Çolak, B. Maviş, Colorants 1 (2022) 149–164.
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| DOI
M.O. Çoruh, G. Gündüz, Ü. Çolak, B. Maviş, Colorants 1 (2022) 149–164.
2022 | Thesis | IST-REx-ID: 11128 |

Genetic basis of flower colour as a model for adaptive evolution
L. Matejovicova, Genetic Basis of Flower Colour as a Model for Adaptive Evolution, ISTA, 2022.
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L. Matejovicova, Genetic Basis of Flower Colour as a Model for Adaptive Evolution, ISTA, 2022.
2022 | Journal Article | IST-REx-ID: 11135 |

On the operator norm of a Hermitian random matrix with correlated entries
J. Reker, Random Matrices: Theory and Applications (2022).
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| arXiv
J. Reker, Random Matrices: Theory and Applications (2022).
2022 | Journal Article | IST-REx-ID: 11142
Enhanced thermoelectric performance in SnTe due to the energy filtering effect introduced by Bi2O3
T. Hong, C. Guo, D. Wang, B. Qin, C. Chang, X. Gao, L.D. Zhao, Materials Today Energy 25 (2022).
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| DOI
T. Hong, C. Guo, D. Wang, B. Qin, C. Chang, X. Gao, L.D. Zhao, Materials Today Energy 25 (2022).
2022 | Journal Article | IST-REx-ID: 11143 |

Developmentally regulated impairment of parvalbumin interneuron synaptic transmission in an experimental model of Dravet syndrome
K. Kaneko, C. Currin, K.M. Goff, E.R. Wengert, A. Somarowthu, T.P. Vogels, E.M. Goldberg, Cell Reports 38 (2022).
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K. Kaneko, C. Currin, K.M. Goff, E.R. Wengert, A. Somarowthu, T.P. Vogels, E.M. Goldberg, Cell Reports 38 (2022).