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4929 Publications

2016 | Journal Article | IST-REx-ID: 1247 | OA
ROTUNDA3 function in plant development by phosphatase 2A-mediated regulation of auxin transporter recycling
M. Karampelias, P. Neyt, S. De Groeve, S. Aesaert, G. Coussens, J. Rolčík, L. Bruno, N. De Winne, A. Van Minnebruggen, M. Van Montagu, M. Ponce, J. Micol, J. Friml, G. De Jaeger, M. Van Lijsebettens, PNAS 113 (2016) 2768–2773.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
2016 | Journal Article | IST-REx-ID: 1246 | OA
Imaging of electric and magnetic fields near plasmonic nanowires
I. Kabakova, A. De Hoogh, R. Van Der Wel, M. Wulf, B. Le Feber, L. Kuipers, Scientific Reports 6 (2016).
[Published Version] View | Files available | DOI
 
2016 | Conference Paper | IST-REx-ID: 1245
Game-theoretic models identify useful principles for peer collaboration in online learning platforms
V. Pandey, K. Chatterjee, in:, Proceedings of the ACM Conference on Computer Supported Cooperative Work, ACM, 2016, pp. 365–368.
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2016 | Journal Article | IST-REx-ID: 1244 | OA
Chimera proteins with affinity for membranes and microtubule tips polarize in the membrane of fission yeast cells
P. Recouvreux, T.R. Sokolowski, A. Grammoustianou, P. Tenwolde, M. Dogterom, PNAS 113 (2016) 1811–1816.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
2016 | Journal Article | IST-REx-ID: 1248 | OA
Information processing in living systems
G. Tkačik, W. Bialek, Annual Review of Condensed Matter Physics 7 (2016) 89–117.
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2016 | Journal Article | IST-REx-ID: 1249 | OA
Determining physical properties of the cell cortex
A. Saha, M. Nishikawa, M. Behrndt, C.-P.J. Heisenberg, F. Julicher, S. Grill, Biophysical Journal 110 (2016) 1421–1429.
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1251 | OA
TWISTED DWARF1 mediates the action of auxin transport inhibitors on actin cytoskeleton dynamics
Zhu J, Bailly A, Zwiewka M, Sovero V, Di Donato M, Ge P, Oehri J, Aryal B, Hao P, Linnert M, Burgardt N, Lücke C, Weiwad M, Michel M, Weiergräber O, Pollmann S, Azzarello E, Mancuso S, Ferro N, Fukao Y, Hoffmann C, Wedlich Söldner R, Friml J, Thomas C, Geisler M. 2016. TWISTED DWARF1 mediates the action of auxin transport inhibitors on actin cytoskeleton dynamics. Plant Cell. 28(4), 930–948.
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2016 | Journal Article | IST-REx-ID: 1252 | OA
Inducing a map on homology from a correspondence
S. Harker, H. Kokubu, K. Mischaikow, P. Pilarczyk, Proceedings of the American Mathematical Society 144 (2016) 1787–1801.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2016 | Journal Article | IST-REx-ID: 1254 | OA
Uniform expansivity outside a critical neighborhood in the quadratic family
A. Golmakani, S. Luzzatto, P. Pilarczyk, Experimental Mathematics 25 (2016) 116–124.
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2016 | Journal Article | IST-REx-ID: 1255 | OA
Down syndrome cell adhesion molecule 1: Testing for a role in insect immunity, behaviour and reproduction
R. Peuß, K. Wensing, L. Woestmann, H. Eggert, B. Milutinovic, M. Sroka, J. Scharsack, J. Kurtz, S. Armitage, Royal Society Open Science 3 (2016).
[Published Version] View | Files available | DOI
 
2016 | Conference Paper | IST-REx-ID: 1256 | OA
From stateflow simulation to verified implementation: A verification approach and a real-time train controller design
Y. Jiang, Y. Yang, H. Liu, H. Kong, M. Gu, J. Sun, L. Sha, in:, IEEE, 2016.
[Submitted Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1257 | OA
A central limit theorem for products of random matrices and GOE statistics for the Anderson model on long boxes
C. Sadel, B. Virág, Communications in Mathematical Physics 343 (2016) 881–919.
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1258
DRACULA2 is a dynamic nucleoporin with a role in regulating the shade avoidance syndrome in Arabidopsis
M. Gallemi, A. Galstyan, S. Paulišić, C. Then, A. Ferrández Ayela, L. Lorenzo Orts, I. Roig Villanova, X. Wang, J. Micol, M. Ponce, P. Devlin, J. Martínez García, Development 143 (2016) 1623–1631.
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2016 | Journal Article | IST-REx-ID: 1259 | OA
Bogolubov–Hartree–Fock theory for strongly interacting fermions in the low density limit
G. Bräunlich, C. Hainzl, R. Seiringer, Mathematical Physics, Analysis and Geometry 19 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1260 | OA
The dual of the space of interactions in neural network models
D. De Martino, International Journal of Modern Physics C 27 (2016).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2016 | Journal Article | IST-REx-ID: 1261 | OA
Long-time behavior of a finite volume discretization for a fourth order diffusion equation
J. Maas, D. Matthes, Nonlinearity 29 (2016) 1992–2023.
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2016 | Journal Article | IST-REx-ID: 1264 | OA
Sorting motifs involved in the trafficking and localization of the PIN1 auxin efflux carrier
G. Sancho Andrés, E. Soriano Ortega, C. Gao, J. Bernabé Orts, M. Narasimhan, A. Müller, R. Tejos, L. Jiang, J. Friml, F. Aniento, M. Marcote, Plant Physiology 171 (2016) 1965–1982.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
2016 | Journal Article | IST-REx-ID: 1265
Mapping the subcellular mechanical properties of live cells in tissues with fluorescence emission-Brillouin imaging
K. Elsayad, S. Werner, M. Gallemi, J. Kong, E. Guajardo, L. Zhang, Y. Jaillais, T. Greb, Y. Belkhadir, Science Signaling 9 (2016).
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2016 | Journal Article | IST-REx-ID: 1266 | OA
Neural oscillations as a signature of efficient coding in the presence of synaptic delays
M.J. Chalk, B. Gutkin, S. Denève, ELife 5 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1269 | OA
Plant hormones in interactions with the environment
E. Benková, Plant Molecular Biology 91 (2016) 597.
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1267 | OA
Nonexistence of large nuclei in the liquid drop model
R. Frank, R. Killip, P. Nam, Letters in Mathematical Physics 106 (2016) 1033–1036.
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1268
Immune memory in invertebrates
B. Milutinovic, J. Kurtz, Seminars in Immunology 28 (2016) 328–342.
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2016 | Journal Article | IST-REx-ID: 1271 | OA
Steering cell migration by alternating blebs and actin-rich protrusions
A. Diz Muñoz, P. Romanczuk, W. Yu, M. Bergert, K. Ivanovitch, G. Salbreux, C.-P.J. Heisenberg, E. Paluch, BMC Biology 14 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1273 | OA
Lateral root emergence in Arabidopsis is dependent on transcription factor LBD29 regulation of auxin influx carrier LAX3
S. Porco, A. Larrieu, Y. Du, A. Gaudinier, T. Goh, K. Swarup, R. Swarup, B. Kuempers, A. Bishopp, J. Lavenus, I. Casimiro, K. Hill, E. Benková, H. Fukaki, S. Brady, B. Scheres, B. Peéet, M. Bennett, Development 143 (2016) 3340–3349.
[Preprint] View | DOI | Download Preprint (ext.)
 
2016 | Journal Article | IST-REx-ID: 1272 | OA
Generalized offsetting of planar structures using skeletons
M. Held, S. Huber, P. Palfrader, Computer-Aided Design and Applications 13 (2016) 712–721.
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1279 | OA
Optogenetically blocking sharp wave ripple events in sleep does not interfere with the formation of stable spatial representation in the CA1 area of the hippocampus
K. Kovács, J. O’Neill, P. Schönenberger, M. Penttonen, D.K. Rangel Guerrero, J.L. Csicsvari, PLoS One 11 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1278 | OA
Distribution and structure of synapses on medial vestibular nuclear neurons targeted by cerebellar flocculus purkinje cells and vestibular nerve in mice: Light and electron microscopy studies
H. Matsuno, M. Kudoh, A. Watakabe, T. Yamamori, R. Shigemoto, S. Nagao, PLoS One 11 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1276 | OA
Atomistic determinants of co-enzyme Q reduction at the Qi-site of the cytochrome bc1 complex
P. Postila, K. Kaszuba, P. Kuleta, I. Vattulainen, M. Sarewicz, A. Osyczka, T. Róg, Scientific Reports 6 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1277 | OA
Danger-associated peptide signaling in Arabidopsis requires clathrin
F. Ortiz Morea, D. Savatin, W. Dejonghe, R. Kumar, Y. Luo, M. Adamowski, J. Van Begin, K. Dressano, G. De Oliveira, X. Zhao, Q. Lu, A. Madder, J. Friml, D. De Moura, E. Russinova, PNAS 113 (2016) 11028–11033.
[Preprint] View | DOI | Download Preprint (ext.)
 
2016 | Journal Article | IST-REx-ID: 1281 | OA
Nitrate controls root development through posttranscriptional regulation of the NRT1.1/NPF6.3 transporter sensor
E. Bouguyon, F. Perrine Walker, M. Pervent, J. Rochette, C. Cuesta, E. Benková, A. Martinière, L. Bach, G. Krouk, A. Gojon, P. Nacry, Plant Physiology 172 (2016) 1237–1248.
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2016 | Journal Article | IST-REx-ID: 1282 | OA
On eigenvalues of random complexes
A. Gundert, U. Wagner, Israel Journal of Mathematics 216 (2016) 545–582.
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2016 | Journal Article | IST-REx-ID: 1280 | OA
Fixed energy universality for generalized wigner matrices
P. Bourgade, L. Erdös, H. Yau, J. Yin, Communications on Pure and Applied Mathematics 69 (2016) 1815–1881.
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2016 | Journal Article | IST-REx-ID: 1275
Callan-Jones et al. Reply
A. Callan Jones, V. Ruprecht, S. Wieser, C.-P.J. Heisenberg, R. Voituriez, Physical Review Letters 117 (2016).
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2016 | Journal Article | IST-REx-ID: 1283
Seedlings’ strategy to overcome a soil barrier
Q. Zhu, E. Benková, Trends in Plant Science 21 (2016) 809–811.
[Submitted Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1286 | OA
Rotation of cold molecular ions inside a Bose-Einstein condensate
B. Midya, M. Tomza, R. Schmidt, M. Lemeshko, Physical Review A - Atomic, Molecular, and Optical Physics 94 (2016).
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2016 | Journal Article | IST-REx-ID: 1285
Focal adhesion-independent cell migration
E. Paluch, I. Aspalter, M.K. Sixt, Annual Review of Cell and Developmental Biology 32 (2016) 469–490.
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2016 | Journal Article | IST-REx-ID: 1288
Reversible FMN dissociation from Escherichia coli respiratory complex I
P. Holt, R. Efremov, E. Nakamaru Ogiso, L.A. Sazanov, Biochimica et Biophysica Acta - Bioenergetics 1857 (2016) 1777–1785.
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2016 | Journal Article | IST-REx-ID: 1291 | OA
Periodic striped ground states in Ising models with competing interactions
A. Giuliani, R. Seiringer, Communications in Mathematical Physics 347 (2016) 983–1007.
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1293 | OA
Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors
L.T. Solus, C. Uhler, R. Yoshida, Linear Algebra and Its Applications 509 (2016) 247–275.
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2016 | Journal Article | IST-REx-ID: 1290 | OA
Compounds that select against the tetracycline-resistance efflux pump
L. Stone, M. Baym, T. Lieberman, R.P. Chait, J. Clardy, R. Kishony, Nature Chemical Biology 12 (2016) 902–904.
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2016 | Journal Article | IST-REx-ID: 1295
Multiple covers with balls II: Weighted averages
H. Edelsbrunner, M. Iglesias Ham, Electronic Notes in Discrete Mathematics 54 (2016) 169–174.
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2016 | Journal Article | IST-REx-ID: 1292 | OA
Computing the Thurston–Bennequin invariant in open books
S. Durst, M. Kegel, M.D. Klukas, Acta Mathematica Hungarica 150 (2016) 441–455.
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2016 | Conference Paper | IST-REx-ID: 1319
DefSense: computational design of customized deformable input devices
M. Bächer, B. Hepp, F. Pece, P. Kry, B. Bickel, B. Thomaszewski, O. Hilliges, in:, ACM, 2016, pp. 3806–3816.
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2016 | Journal Article | IST-REx-ID: 1323 | OA
Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses
N. Vyleta, C. Borges Merjane, P.M. Jonas, ELife 5 (2016).
[Published Version] View | Files available | DOI
 
2016 | Conference Paper | IST-REx-ID: 1325 | OA
Stability in graphs and games
T. Brázdil, V. Forejt, A. Kučera, P. Novotný, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
[Published Version] View | Files available | DOI
 
2016 | Conference Paper | IST-REx-ID: 1320
Scale-invariant systems realize nonlinear differential operators
M. Lang, E. Sontag, in:, IEEE, 2016.
[Preprint] View | Files available | DOI
 
2016 | Conference Paper | IST-REx-ID: 1324
Indefinite-horizon reachability in Goal-DEC-POMDPs
K. Chatterjee, M. Chmelik, in:, Proceedings of the Twenty-Sixth International Conference on International Conference on Automated Planning and Scheduling, AAAI Press, 2016, pp. 88–96.
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2016 | Journal Article | IST-REx-ID: 1329 | OA
De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata
A.K. Huylmans, A. López Ezquerra, J. Parsch, M. Cordellier, Genome Biology and Evolution 8 (2016) 3120–3139.
[Published Version] View | Files available | DOI
 
2016 | Conference Paper | IST-REx-ID: 1327 | OA
Stochastic shortest path with energy constraints in POMDPs
T. Brázdil, K. Chatterjee, M. Chmelik, A. Gupta, P. Novotný, in:, Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems, ACM, 2016, pp. 1465–1466.
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2016 | Conference Paper | IST-REx-ID: 1326 | OA
Optimizing the expected mean payoff in Energy Markov Decision Processes
T. Brázdil, A. Kučera, P. Novotný, in:, Springer, 2016, pp. 32–49.
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