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4929 Publications

2016 | Journal Article | IST-REx-ID: 1216 | OA
Acceleration feature points of unsteady shear flows
J. Kasten, J. Reininghaus, I. Hotz, H. Hege, B. Noack, G. Daviller, M. Morzyński, Archives of Mechanics 68 (2016) 55–80.
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2016 | Journal Article | IST-REx-ID: 1217
Efficient T-cell priming and activation requires signaling through prostaglandin E2 (EP) receptors
V. Sreeramkumar, M. Hons, C. Punzón, J. Stein, D. Sancho, M. Fresno Forcelledo, N. Cuesta, Immunology and Cell Biology 94 (2016) 39–51.
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2016 | Journal Article | IST-REx-ID: 1218 | OA
Culturing synechocystis sp. Strain pcc 6803 with N2 and CO2 in a diel regime reveals multiphase glycogen dynamics with low maintenance costs
A. Angermayr, P. Van Alphen, D. Hasdemir, G. Kramer, M. Iqbal, W. Van Grondelle, H. Hoefsloot, Y. Choi, K. Hellingwerf, Applied and Environmental Microbiology 82 (2016) 4180–4189.
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2016 | Journal Article | IST-REx-ID: 1219 | OA
Bulk universality for deformed wigner matrices
J. Lee, K. Schnelli, B. Stetler, H. Yau, Annals of Probability 44 (2016) 2349–2425.
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2016 | Conference Paper | IST-REx-ID: 1220 | OA
Fuselage boundary layer ingestion propulsion applied to a thin haul commuter aircraft for optimal efficiency
G. Mikić, A. Stoll, J. Bevirt, R. Grah, M. Moore, in:, AIAA, 2016, pp. 1–19.
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2016 | Journal Article | IST-REx-ID: 1221 | OA
Strong morphological defects in conditional Arabidopsis abp1 knock-down mutants generated in absence of functional ABP1 protein
J. Michalko, M. Glanc, C. Perrot Rechenmann, J. Friml, F1000 Research 5 (2016).
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2016 | Journal Article | IST-REx-ID: 1222 | OA
Optimal packings of congruent circles on a square flat torus
O. Musin, A. Nikitenko, Discrete & Computational Geometry 55 (2016) 1–20.
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2016 | Journal Article | IST-REx-ID: 1223 | OA
Localization for transversally periodic random potentials on binary trees
R. Froese, D. Lee, C. Sadel, W. Spitzer, G. Stolz, Journal of Spectral Theory 6 (2016) 557–600.
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2016 | Journal Article | IST-REx-ID: 1224
The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant
Z. Teitel, M. Pickup, D. Field, S. Barrett, Plant Biology 18 (2016) 98–103.
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2016 | Journal Article | IST-REx-ID: 1226 | OA
Atomic structure of the entire mammalian mitochondrial complex i
K. Fiedorczuk, J.A. Letts, G. Degliesposti, K. Kaszuba, M. Skehel, L.A. Sazanov, Nature 538 (2016) 406–410.
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2016 | Conference Paper | IST-REx-ID: 1227 | OA
Discrete abstraction of multiaffine systems
H. Kong, E. Bartocci, S. Bogomolov, R. Grosu, T.A. Henzinger, Y. Jiang, C. Schilling, in:, Springer, 2016, pp. 128–144.
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2016 | Conference Paper | IST-REx-ID: 1231 | OA
On the complexity of scrypt and proofs of space in the parallel random oracle model
J.F. Alwen, B. Chen, C. Kamath Hosdurg, V. Kolmogorov, K.Z. Pietrzak, S. Tessaro, in:, Springer, 2016, pp. 358–387.
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2016 | Journal Article | IST-REx-ID: 1232
The architecture of respiratory supercomplexes
J.A. Letts, K. Fiedorczuk, L.A. Sazanov, Nature 537 (2016) 644–648.
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2016 | Conference Paper | IST-REx-ID: 1233 | OA
Standard security does imply security against selective opening for markov distributions
G. Fuchsbauer, F. Heuer, E. Kiltz, K.Z. Pietrzak, in:, Springer, 2016, pp. 282–305.
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2016 | Journal Article | IST-REx-ID: 1238 | OA
Endosomal interactions during root hair growth
D. von Wangenheim, A. Rosero, G. Komis, O. Šamajová, M. Ovečka, B. Voigt, J. Šamaj, Frontiers in Plant Science 6 (2016).
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2016 | Conference Paper | IST-REx-ID: 1237
Computation of cubical Steenrod squares
M. Krcál, P. Pilarczyk, in:, Springer, 2016, pp. 140–151.
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2016 | Journal Article | IST-REx-ID: 1240 | OA
Long non-coding RNAs display higher natural expression variation than protein-coding genes in healthy humans
A. Kornienko, C. Dotter, P. Guenzl, H. Gisslinger, B. Gisslinger, C. Cleary, R. Kralovics, F. Pauler, D. Barlow, Genome Biology 17 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1239
Cortical flow-driven shapes of nonadherent cells
A. Callan Jones, V. Ruprecht, S. Wieser, C.-P.J. Heisenberg, R. Voituriez, Physical Review Letters 116 (2016).
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2016 | Journal Article | IST-REx-ID: 1242 | OA
Extending the dynamic range of transcription factor action by translational regulation
T.R. Sokolowski, A. Walczak, W. Bialek, G. Tkačik, Physical Review E Statistical Nonlinear and Soft Matter Physics 93 (2016).
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2016 | Journal Article | IST-REx-ID: 1241 | OA
The role of recombination in evolutionary rescue
H. Uecker, J. Hermisson, Genetics 202 (2016) 721–732.
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2016 | Journal Article | IST-REx-ID: 1247 | OA
ROTUNDA3 function in plant development by phosphatase 2A-mediated regulation of auxin transporter recycling
M. Karampelias, P. Neyt, S. De Groeve, S. Aesaert, G. Coussens, J. Rolčík, L. Bruno, N. De Winne, A. Van Minnebruggen, M. Van Montagu, M. Ponce, J. Micol, J. Friml, G. De Jaeger, M. Van Lijsebettens, PNAS 113 (2016) 2768–2773.
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2016 | Journal Article | IST-REx-ID: 1246 | OA
Imaging of electric and magnetic fields near plasmonic nanowires
I. Kabakova, A. De Hoogh, R. Van Der Wel, M. Wulf, B. Le Feber, L. Kuipers, Scientific Reports 6 (2016).
[Published Version] View | Files available | DOI
 
2016 | Conference Paper | IST-REx-ID: 1245
Game-theoretic models identify useful principles for peer collaboration in online learning platforms
V. Pandey, K. Chatterjee, in:, Proceedings of the ACM Conference on Computer Supported Cooperative Work, ACM, 2016, pp. 365–368.
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2016 | Journal Article | IST-REx-ID: 1244 | OA
Chimera proteins with affinity for membranes and microtubule tips polarize in the membrane of fission yeast cells
P. Recouvreux, T.R. Sokolowski, A. Grammoustianou, P. Tenwolde, M. Dogterom, PNAS 113 (2016) 1811–1816.
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2016 | Journal Article | IST-REx-ID: 1248 | OA
Information processing in living systems
G. Tkačik, W. Bialek, Annual Review of Condensed Matter Physics 7 (2016) 89–117.
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2016 | Journal Article | IST-REx-ID: 1249 | OA
Determining physical properties of the cell cortex
A. Saha, M. Nishikawa, M. Behrndt, C.-P.J. Heisenberg, F. Julicher, S. Grill, Biophysical Journal 110 (2016) 1421–1429.
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2016 | Journal Article | IST-REx-ID: 1251 | OA
TWISTED DWARF1 mediates the action of auxin transport inhibitors on actin cytoskeleton dynamics
Zhu J, Bailly A, Zwiewka M, Sovero V, Di Donato M, Ge P, Oehri J, Aryal B, Hao P, Linnert M, Burgardt N, Lücke C, Weiwad M, Michel M, Weiergräber O, Pollmann S, Azzarello E, Mancuso S, Ferro N, Fukao Y, Hoffmann C, Wedlich Söldner R, Friml J, Thomas C, Geisler M. 2016. TWISTED DWARF1 mediates the action of auxin transport inhibitors on actin cytoskeleton dynamics. Plant Cell. 28(4), 930–948.
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2016 | Journal Article | IST-REx-ID: 1252 | OA
Inducing a map on homology from a correspondence
S. Harker, H. Kokubu, K. Mischaikow, P. Pilarczyk, Proceedings of the American Mathematical Society 144 (2016) 1787–1801.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2016 | Journal Article | IST-REx-ID: 1254 | OA
Uniform expansivity outside a critical neighborhood in the quadratic family
A. Golmakani, S. Luzzatto, P. Pilarczyk, Experimental Mathematics 25 (2016) 116–124.
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2016 | Journal Article | IST-REx-ID: 1255 | OA
Down syndrome cell adhesion molecule 1: Testing for a role in insect immunity, behaviour and reproduction
R. Peuß, K. Wensing, L. Woestmann, H. Eggert, B. Milutinovic, M. Sroka, J. Scharsack, J. Kurtz, S. Armitage, Royal Society Open Science 3 (2016).
[Published Version] View | Files available | DOI
 
2016 | Conference Paper | IST-REx-ID: 1256 | OA
From stateflow simulation to verified implementation: A verification approach and a real-time train controller design
Y. Jiang, Y. Yang, H. Liu, H. Kong, M. Gu, J. Sun, L. Sha, in:, IEEE, 2016.
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2016 | Journal Article | IST-REx-ID: 1257 | OA
A central limit theorem for products of random matrices and GOE statistics for the Anderson model on long boxes
C. Sadel, B. Virág, Communications in Mathematical Physics 343 (2016) 881–919.
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2016 | Journal Article | IST-REx-ID: 1258
DRACULA2 is a dynamic nucleoporin with a role in regulating the shade avoidance syndrome in Arabidopsis
M. Gallemi, A. Galstyan, S. Paulišić, C. Then, A. Ferrández Ayela, L. Lorenzo Orts, I. Roig Villanova, X. Wang, J. Micol, M. Ponce, P. Devlin, J. Martínez García, Development 143 (2016) 1623–1631.
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2016 | Journal Article | IST-REx-ID: 1259 | OA
Bogolubov–Hartree–Fock theory for strongly interacting fermions in the low density limit
G. Bräunlich, C. Hainzl, R. Seiringer, Mathematical Physics, Analysis and Geometry 19 (2016).
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2016 | Journal Article | IST-REx-ID: 1260 | OA
The dual of the space of interactions in neural network models
D. De Martino, International Journal of Modern Physics C 27 (2016).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2016 | Journal Article | IST-REx-ID: 1261 | OA
Long-time behavior of a finite volume discretization for a fourth order diffusion equation
J. Maas, D. Matthes, Nonlinearity 29 (2016) 1992–2023.
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2016 | Journal Article | IST-REx-ID: 1264 | OA
Sorting motifs involved in the trafficking and localization of the PIN1 auxin efflux carrier
G. Sancho Andrés, E. Soriano Ortega, C. Gao, J. Bernabé Orts, M. Narasimhan, A. Müller, R. Tejos, L. Jiang, J. Friml, F. Aniento, M. Marcote, Plant Physiology 171 (2016) 1965–1982.
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2016 | Journal Article | IST-REx-ID: 1265
Mapping the subcellular mechanical properties of live cells in tissues with fluorescence emission-Brillouin imaging
K. Elsayad, S. Werner, M. Gallemi, J. Kong, E. Guajardo, L. Zhang, Y. Jaillais, T. Greb, Y. Belkhadir, Science Signaling 9 (2016).
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2016 | Journal Article | IST-REx-ID: 1266 | OA
Neural oscillations as a signature of efficient coding in the presence of synaptic delays
M.J. Chalk, B. Gutkin, S. Denève, ELife 5 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1269 | OA
Plant hormones in interactions with the environment
E. Benková, Plant Molecular Biology 91 (2016) 597.
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2016 | Journal Article | IST-REx-ID: 1267 | OA
Nonexistence of large nuclei in the liquid drop model
R. Frank, R. Killip, P. Nam, Letters in Mathematical Physics 106 (2016) 1033–1036.
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2016 | Journal Article | IST-REx-ID: 1268
Immune memory in invertebrates
B. Milutinovic, J. Kurtz, Seminars in Immunology 28 (2016) 328–342.
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2016 | Journal Article | IST-REx-ID: 1271 | OA
Steering cell migration by alternating blebs and actin-rich protrusions
A. Diz Muñoz, P. Romanczuk, W. Yu, M. Bergert, K. Ivanovitch, G. Salbreux, C.-P.J. Heisenberg, E. Paluch, BMC Biology 14 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1273 | OA
Lateral root emergence in Arabidopsis is dependent on transcription factor LBD29 regulation of auxin influx carrier LAX3
S. Porco, A. Larrieu, Y. Du, A. Gaudinier, T. Goh, K. Swarup, R. Swarup, B. Kuempers, A. Bishopp, J. Lavenus, I. Casimiro, K. Hill, E. Benková, H. Fukaki, S. Brady, B. Scheres, B. Peéet, M. Bennett, Development 143 (2016) 3340–3349.
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2016 | Journal Article | IST-REx-ID: 1272 | OA
Generalized offsetting of planar structures using skeletons
M. Held, S. Huber, P. Palfrader, Computer-Aided Design and Applications 13 (2016) 712–721.
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2016 | Journal Article | IST-REx-ID: 1279 | OA
Optogenetically blocking sharp wave ripple events in sleep does not interfere with the formation of stable spatial representation in the CA1 area of the hippocampus
K. Kovács, J. O’Neill, P. Schönenberger, M. Penttonen, D.K. Rangel Guerrero, J.L. Csicsvari, PLoS One 11 (2016).
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2016 | Journal Article | IST-REx-ID: 1278 | OA
Distribution and structure of synapses on medial vestibular nuclear neurons targeted by cerebellar flocculus purkinje cells and vestibular nerve in mice: Light and electron microscopy studies
H. Matsuno, M. Kudoh, A. Watakabe, T. Yamamori, R. Shigemoto, S. Nagao, PLoS One 11 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1276 | OA
Atomistic determinants of co-enzyme Q reduction at the Qi-site of the cytochrome bc1 complex
P. Postila, K. Kaszuba, P. Kuleta, I. Vattulainen, M. Sarewicz, A. Osyczka, T. Róg, Scientific Reports 6 (2016).
[Published Version] View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1277 | OA
Danger-associated peptide signaling in Arabidopsis requires clathrin
F. Ortiz Morea, D. Savatin, W. Dejonghe, R. Kumar, Y. Luo, M. Adamowski, J. Van Begin, K. Dressano, G. De Oliveira, X. Zhao, Q. Lu, A. Madder, J. Friml, D. De Moura, E. Russinova, PNAS 113 (2016) 11028–11033.
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2016 | Journal Article | IST-REx-ID: 1281 | OA
Nitrate controls root development through posttranscriptional regulation of the NRT1.1/NPF6.3 transporter sensor
E. Bouguyon, F. Perrine Walker, M. Pervent, J. Rochette, C. Cuesta, E. Benková, A. Martinière, L. Bach, G. Krouk, A. Gojon, P. Nacry, Plant Physiology 172 (2016) 1237–1248.
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