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3859 Publications
2013 | Journal Article | IST-REx-ID: 2469 |

Three functions of cadherins in cell adhesion
J.-L. Maître, C.-P.J. Heisenberg, Current Biology 23 (2013) R626–R633.
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J.-L. Maître, C.-P.J. Heisenberg, Current Biology 23 (2013) R626–R633.
2013 | Journal Article | IST-REx-ID: 2470 |

Overexpression of the auxin binding PROTEIN1 modulates PIN-dependent auxin transport in tobacco cells
M. Čovanová, M. Sauer, J. Rychtář, J. Friml, J. Petrášek, E. Zažímalová, PLoS One 8 (2013).
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M. Čovanová, M. Sauer, J. Rychtář, J. Friml, J. Petrášek, E. Zažímalová, PLoS One 8 (2013).
2013 | Journal Article | IST-REx-ID: 2471 |

Mechanism of protein kinetic stabilization by engineered disulfide crosslinks
I. Sanchez-Romero, A. Ariza, K. Wilson, M. Skjøt, J. Vind, L. De Maria, L. Skov, J. Sánchez Ruiz, PLoS One 8 (2013).
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I. Sanchez-Romero, A. Ariza, K. Wilson, M. Skjøt, J. Vind, L. De Maria, L. Skov, J. Sánchez Ruiz, PLoS One 8 (2013).
2013 | Journal Article | IST-REx-ID: 2472 |

Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development
C. Cazzonelli, M. Vanstraelen, S. Simon, K. Yin, A. Carron Arthur, N. Nisar, G. Tarle, A. Cuttriss, I. Searle, E. Benková, U. Mathesius, J. Masle, J. Friml, B. Pogson, PLoS One 8 (2013).
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C. Cazzonelli, M. Vanstraelen, S. Simon, K. Yin, A. Carron Arthur, N. Nisar, G. Tarle, A. Cuttriss, I. Searle, E. Benková, U. Mathesius, J. Masle, J. Friml, B. Pogson, PLoS One 8 (2013).
2013 | Journal Article | IST-REx-ID: 2473 |

Genetic hitch-hiking in spatially extended populations
N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 75–89.
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N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 75–89.
2013 | Journal Article | IST-REx-ID: 2516
Attribute-based classification for zero-shot learning of object categories
C. Lampert, H. Nickisch, S. Harmeling, IEEE Transactions on Pattern Analysis and Machine Intelligence 36 (2013) 453–465.
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C. Lampert, H. Nickisch, S. Harmeling, IEEE Transactions on Pattern Analysis and Machine Intelligence 36 (2013) 453–465.
2013 | Conference Paper | IST-REx-ID: 2517 |

Formalizing and reasoning about quality
S. Almagor, U. Boker, O. Kupferman, 7966 (2013) 15–27.
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S. Almagor, U. Boker, O. Kupferman, 7966 (2013) 15–27.
2013 | Conference Paper | IST-REx-ID: 2518 |

The power of linear programming for finite-valued CSPs: A constructive characterization
V. Kolmogorov, in:, Springer, 2013, pp. 625–636.
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V. Kolmogorov, in:, Springer, 2013, pp. 625–636.
2013 | Conference Paper | IST-REx-ID: 2520 |

The supervised IBP: Neighbourhood preserving infinite latent feature models
N. Quadrianto, V. Sharmanska, D. Knowles, Z. Ghahramani, in:, Proceedings of the 29th Conference Uncertainty in Artificial Intelligence, AUAI Press, 2013, pp. 527–536.
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N. Quadrianto, V. Sharmanska, D. Knowles, Z. Ghahramani, in:, Proceedings of the 29th Conference Uncertainty in Artificial Intelligence, AUAI Press, 2013, pp. 527–536.
2013 | Journal Article | IST-REx-ID: 2698 |

Stability and semiclassics in self-generated fields
L. Erdös, S. Fournais, J. Solovej, Journal of the European Mathematical Society 15 (2013) 2093–2113.
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L. Erdös, S. Fournais, J. Solovej, Journal of the European Mathematical Society 15 (2013) 2093–2113.
2013 | Conference Paper | IST-REx-ID: 2718 |

Can quantitative and population genetics help us understand evolutionary computation?
N.H. Barton, T. Paixao, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 1573–1580.
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N.H. Barton, T. Paixao, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 1573–1580.
2013 | Conference Paper | IST-REx-ID: 2719
A variance decomposition approach to the analysis of genetic algorithms
T. Paixao, N.H. Barton, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 845–852.
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T. Paixao, N.H. Barton, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 845–852.
2013 | Journal Article | IST-REx-ID: 2720 |

Accumulation of spontaneous mutations in the ciliate Tetrahymena thermophila
H. Long, T. Paixao, R. Azevedo, R. Zufall, Genetics 195 (2013) 527–540.
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H. Long, T. Paixao, R. Azevedo, R. Zufall, Genetics 195 (2013) 527–540.
2013 | Journal Article | IST-REx-ID: 2782 |

Local eigenvalue density for general MANOVA matrices
L. Erdös, B. Farrell, Journal of Statistical Physics 152 (2013) 1003–1032.
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L. Erdös, B. Farrell, Journal of Statistical Physics 152 (2013) 1003–1032.
2013 | Journal Article | IST-REx-ID: 9459 |

The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
A. Zemach, M.Y. Kim, P.-H. Hsieh, D. Coleman-Derr, L. Eshed-Williams, K. Thao, S.L. Harmer, D. Zilberman, Cell 153 (2013) 193–205.
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A. Zemach, M.Y. Kim, P.-H. Hsieh, D. Coleman-Derr, L. Eshed-Williams, K. Thao, S.L. Harmer, D. Zilberman, Cell 153 (2013) 193–205.
2013 | Journal Article | IST-REx-ID: 9481 |

Imprinted expression of genes and small RNA is associated with localized hypomethylation of the maternal genome in rice endosperm
J.A. Rodrigues, R. Ruan, T. Nishimura, M.K. Sharma, R. Sharma, P.C. Ronald, R.L. Fischer, D. Zilberman, Proceedings of the National Academy of Sciences 110 (2013) 7934–7939.
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J.A. Rodrigues, R. Ruan, T. Nishimura, M.K. Sharma, R. Sharma, P.C. Ronald, R.L. Fischer, D. Zilberman, Proceedings of the National Academy of Sciences 110 (2013) 7934–7939.
2013 | Journal Article | IST-REx-ID: 9520 |

A conversation across generations: Soma-germ cell crosstalk in plants
X. Feng, D. Zilberman, H. Dickinson, Developmental Cell 24 (2013) 215–225.
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X. Feng, D. Zilberman, H. Dickinson, Developmental Cell 24 (2013) 215–225.
2013 | Research Data Reference | IST-REx-ID: 9749
Forgiver triumphs in alternating prisoner's dilemma
B. Zagorsky, J. Reiter, K. Chatterjee, M. Nowak, (2013).
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B. Zagorsky, J. Reiter, K. Chatterjee, M. Nowak, (2013).
2013 | Research Data Reference | IST-REx-ID: 9751
Data from: Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection
D. Refardt, T. Bergmiller, R. Kümmerli, (2013).
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D. Refardt, T. Bergmiller, R. Kümmerli, (2013).
2013 | Research Data Reference | IST-REx-ID: 9754
Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies
J. Hearn, G. Stone, N.H. Barton, K. Lohse, L. Bunnefeld, (2013).
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J. Hearn, G. Stone, N.H. Barton, K. Lohse, L. Bunnefeld, (2013).
2013 | Journal Article | IST-REx-ID: 2815 |

Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions
H. Edelsbrunner, B.T. Fasy, G. Rote, Discrete & Computational Geometry 49 (2013) 797–822.
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H. Edelsbrunner, B.T. Fasy, G. Rote, Discrete & Computational Geometry 49 (2013) 797–822.
2013 | Journal Article | IST-REx-ID: 2443 |

Defining the selectivity of processes along the auxin response chain: A study using auxin analogues
S. Simon, M. Kubeš, P. Baster, S. Robert, P. Dobrev, J. Friml, J. Petrášek, E. Zažímalová, New Phytologist 200 (2013) 1034–1048.
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S. Simon, M. Kubeš, P. Baster, S. Robert, P. Dobrev, J. Friml, J. Petrášek, E. Zažímalová, New Phytologist 200 (2013) 1034–1048.
2013 | Journal Article | IST-REx-ID: 2839 |

Interstitial dendritic cell guidance by haptotactic chemokine gradients
M. Weber, R. Hauschild, J. Schwarz, C. Moussion, I. de Vries, D. Legler, S. Luther, M.T. Bollenbach, M.K. Sixt, Science 339 (2013) 328–332.
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M. Weber, R. Hauschild, J. Schwarz, C. Moussion, I. de Vries, D. Legler, S. Luther, M.T. Bollenbach, M.K. Sixt, Science 339 (2013) 328–332.
2013 | Conference Paper | IST-REx-ID: 10902
How to travel between languages
K. Chatterjee, S. Chaubal, S. Rubin, in:, 7th International Conference on Language and Automata Theory and Applications, Springer Nature, Berlin, Heidelberg, 2013, pp. 214–225.
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K. Chatterjee, S. Chaubal, S. Rubin, in:, 7th International Conference on Language and Automata Theory and Applications, Springer Nature, Berlin, Heidelberg, 2013, pp. 214–225.
2013 | Book Chapter | IST-REx-ID: 10900
Live Cell Imaging of Chemotactic Dendritic Cell Migration in Explanted Mouse Ear Preparations
M. Weber, M.K. Sixt, in:, A. Cardona, E. Ubogu (Eds.), Chemokines, Humana Press, Totowa, NJ, 2013, pp. 215–226.
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M. Weber, M.K. Sixt, in:, A. Cardona, E. Ubogu (Eds.), Chemokines, Humana Press, Totowa, NJ, 2013, pp. 215–226.
2013 | Book Chapter | IST-REx-ID: 10899
Differentiation
N.H. Barton, in:, Encyclopedia of Biodiversity, 2nd ed., Elsevier, 2013, pp. 508–515.
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N.H. Barton, in:, Encyclopedia of Biodiversity, 2nd ed., Elsevier, 2013, pp. 508–515.
2013 | Conference Paper | IST-REx-ID: 10897
Persistent homology in image processing
H. Edelsbrunner, in:, Graph-Based Representations in Pattern Recognition, Springer Nature, Berlin, Heidelberg, 2013, pp. 182–183.
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H. Edelsbrunner, in:, Graph-Based Representations in Pattern Recognition, Springer Nature, Berlin, Heidelberg, 2013, pp. 182–183.
2013 | Conference Paper | IST-REx-ID: 10898
Distributed queues in shared memory: Multicore performance and scalability through quantitative relaxation
A. Haas, M. Lippautz, T.A. Henzinger, H. Payer, A. Sokolova, C.M. Kirsch, A. Sezgin, in:, Proceedings of the ACM International Conference on Computing Frontiers - CF ’13, ACM Press, 2013.
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A. Haas, M. Lippautz, T.A. Henzinger, H. Payer, A. Sokolova, C.M. Kirsch, A. Sezgin, in:, Proceedings of the ACM International Conference on Computing Frontiers - CF ’13, ACM Press, 2013.
2013 | Journal Article | IST-REx-ID: 2831 |

Symbolic algorithms for qualitative analysis of Markov decision processes with Büchi objectives
K. Chatterjee, M.H. Henzinger, M. Joglekar, N. Shah, Formal Methods in System Design 42 (2013) 301–327.
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K. Chatterjee, M.H. Henzinger, M. Joglekar, N. Shah, Formal Methods in System Design 42 (2013) 301–327.
2012 | Conference Paper | IST-REx-ID: 2825
Dynamic pruning of factor graphs for maximum marginal prediction
C. Lampert, in:, Neural Information Processing Systems, 2012, pp. 82–90.
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C. Lampert, in:, Neural Information Processing Systems, 2012, pp. 82–90.
2012 | Journal Article | IST-REx-ID: 2848 |

Evolutionary game dynamics in populations with different learners
K. Chatterjee, D. Zufferey, M. Nowak, Journal of Theoretical Biology 301 (2012) 161–173.
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K. Chatterjee, D. Zufferey, M. Nowak, Journal of Theoretical Biology 301 (2012) 161–173.
2012 | Journal Article | IST-REx-ID: 2849 |

On the configuration space of Steiner minimal trees
H. Edelsbrunner, N. Strelkova, Russian Mathematical Surveys 67 (2012) 1167–1168.
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H. Edelsbrunner, N. Strelkova, Russian Mathematical Surveys 67 (2012) 1167–1168.
2012 | Conference Paper | IST-REx-ID: 2888
Quantitative reactive models
T.A. Henzinger, in:, Conference Proceedings MODELS 2012, Springer, 2012, pp. 1–2.
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T.A. Henzinger, in:, Conference Proceedings MODELS 2012, Springer, 2012, pp. 1–2.
2012 | Conference Paper | IST-REx-ID: 2890
Synthesis from incompatible specifications
P. Cerny, S. Gopi, T.A. Henzinger, A. Radhakrishna, N. Totla, in:, Proceedings of the Tenth ACM International Conference on Embedded Software, ACM, 2012, pp. 53–62.
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P. Cerny, S. Gopi, T.A. Henzinger, A. Radhakrishna, N. Totla, in:, Proceedings of the Tenth ACM International Conference on Embedded Software, ACM, 2012, pp. 53–62.
2012 | Conference Paper | IST-REx-ID: 2891 |

Approximate determinization of quantitative automata
U. Boker, T.A. Henzinger, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2012, pp. 362–373.
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U. Boker, T.A. Henzinger, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2012, pp. 362–373.
2012 | Journal Article | IST-REx-ID: 2902
Fractal and computational geometry for generalizing cartographic objects
H. Edelsbrunner, O. Musin, A. Ukhalov, O. Yakimova, V. Alexeev, V. Bogaevskaya, A. Gorohov, M. Preobrazhenskaya, Modeling and Analysis of Information Systems 19 (2012) 152–160.
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H. Edelsbrunner, O. Musin, A. Ukhalov, O. Yakimova, V. Alexeev, V. Bogaevskaya, A. Gorohov, M. Preobrazhenskaya, Modeling and Analysis of Information Systems 19 (2012) 152–160.
2012 | Conference Paper | IST-REx-ID: 2903 |

The adaptive topology of a digital image
H. Edelsbrunner, O. Symonova, in:, IEEE, 2012, pp. 41–48.
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H. Edelsbrunner, O. Symonova, in:, IEEE, 2012, pp. 41–48.
2012 | Journal Article | IST-REx-ID: 2904 |

Weak multipliers for generalized van der Corput sequences
F. Pausinger, Journal de Theorie Des Nombres Des Bordeaux 24 (2012) 729–749.
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F. Pausinger, Journal de Theorie Des Nombres Des Bordeaux 24 (2012) 729–749.
2012 | Journal Article | IST-REx-ID: 2912
Configuration space for shortest networks
H. Edelsbrunner, N. Strelkova, Uspekhi Mat. Nauk 67 (2012) 203–204.
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H. Edelsbrunner, N. Strelkova, Uspekhi Mat. Nauk 67 (2012) 203–204.
2012 | Conference Paper | IST-REx-ID: 2915
Multi-modal learning for dynamic tactile sensing
O. Kroemer, C. Lampert, J. Peters, in:, Deutsches Zentrum für Luft und Raumfahrt, 2012.
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O. Kroemer, C. Lampert, J. Peters, in:, Deutsches Zentrum für Luft und Raumfahrt, 2012.
2012 | Conference Paper | IST-REx-ID: 2916 |

Interface Simulation Distances
P. Cerny, M. Chmelik, T.A. Henzinger, A. Radhakrishna, in:, Electronic Proceedings in Theoretical Computer Science, EPTCS, 2012, pp. 29–42.
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P. Cerny, M. Chmelik, T.A. Henzinger, A. Radhakrishna, in:, Electronic Proceedings in Theoretical Computer Science, EPTCS, 2012, pp. 29–42.
2012 | Journal Article | IST-REx-ID: 2917
The game of active search for extra terrestrial intelligence Breaking the Great Silence
H. de Vladar, International Journal of Astrobiology 12 (2012) 53–62.
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H. de Vladar, International Journal of Astrobiology 12 (2012) 53–62.
2012 | Preprint | IST-REx-ID: 2928 |

Generalized sequential tree-reweighted message passing
V. Kolmogorov, T. Schoenemann, ArXiv (2012).
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V. Kolmogorov, T. Schoenemann, ArXiv (2012).
2012 | Conference Paper | IST-REx-ID: 2930 |

Towards minimizing k-submodular functions
A. Huber, V. Kolmogorov, in:, Springer, 2012, pp. 451–462.
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A. Huber, V. Kolmogorov, in:, Springer, 2012, pp. 451–462.
2012 | Journal Article | IST-REx-ID: 2931
A dual decomposition approach to feature correspondence
L. Torresani, V. Kolmogorov, C. Rother, IEEE Transactions on Pattern Analysis and Machine Intelligence 35 (2012) 259–271.
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L. Torresani, V. Kolmogorov, C. Rother, IEEE Transactions on Pattern Analysis and Machine Intelligence 35 (2012) 259–271.
2012 | Conference Paper | IST-REx-ID: 2936 |

Finite automata with time delay blocks
K. Chatterjee, T.A. Henzinger, V. Prabhu, in:, Roceedings of the Tenth ACM International Conference on Embedded Software, ACM, 2012, pp. 43–52.
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K. Chatterjee, T.A. Henzinger, V. Prabhu, in:, Roceedings of the Tenth ACM International Conference on Embedded Software, ACM, 2012, pp. 43–52.
2012 | Conference Paper | IST-REx-ID: 2937 |

Full proof cryptography: Verifiable compilation of efficient zero-knowledge protocols
J. Almeida, M. Barbosa, E. Bangerter, G. Barthe, S. Krenn, S. Béguelin, in:, Proceedings of the 2012 ACM Conference on Computer and Communications Security, ACM, 2012, pp. 488–500.
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J. Almeida, M. Barbosa, E. Bangerter, G. Barthe, S. Krenn, S. Béguelin, in:, Proceedings of the 2012 ACM Conference on Computer and Communications Security, ACM, 2012, pp. 488–500.
2012 | Journal Article | IST-REx-ID: 2938
Effects of social immunity and unicoloniality on host parasite interactions in invasive insect societies
L.V. Ugelvig, S. Cremer, Functional Ecology 26 (2012) 1300–1312.
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L.V. Ugelvig, S. Cremer, Functional Ecology 26 (2012) 1300–1312.
2012 | Journal Article | IST-REx-ID: 2941 |

On the optimality of functionals over triangulations of Delaunay sets
N. Dolbilin, H. Edelsbrunner, O. Musin, Russian Mathematical Surveys 67 (2012) 781–783.
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N. Dolbilin, H. Edelsbrunner, O. Musin, Russian Mathematical Surveys 67 (2012) 781–783.
2012 | Conference Paper | IST-REx-ID: 2942
Independent implementability of viewpoints
T.A. Henzinger, D. Nickovic, in:, Conference Proceedings Monterey Workshop 2012, Springer, 2012, pp. 380–395.
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T.A. Henzinger, D. Nickovic, in:, Conference Proceedings Monterey Workshop 2012, Springer, 2012, pp. 380–395.