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2836 Publications

2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, A. (2011). Consequences of different null models on the tree shape bias of supertree methods. Systematic Biology, 60(2), 218–225. https://doi.org/10.1093/sysbio/syq086
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2011 | Journal Article | IST-REx-ID: 3371 | OA
Sixt, M. K., & Parent, C. (2011). Cells on the move in Philadelphia. Molecular Biology and Evolution, 22(6), 724. https://doi.org/10.1091/mbc.E10-12-0958
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot, P., Abe, J., Alcock, J., Alizon, S., Alpedrinha, J., Andersson, M., … Zink, A. (2011). Inclusive fitness theory and eusociality. Nature, 471(7339), E1–E4. https://doi.org/10.1038/nature09831
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2011 | Journal Article | IST-REx-ID: 3373 | OA
Jahnel, M., Behrndt, M., Jannasch, A., Schaeffer, E., & Grill, S. (2011). Measuring the complete force field of an optical trap. Optics Letters, 36(7), 1260–1262. https://doi.org/10.1364/OL.36.001260
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2011 | Journal Article | IST-REx-ID: 3374 | OA
Tkacik, G., & Walczak, A. (2011). Information transmission in genetic regulatory networks a review. Journal of Physics: Condensed Matter, 23(15). https://doi.org/10.1088/0953-8984/23/15/153102
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2011 | Journal Article | IST-REx-ID: 3375 | OA
de Vladar, H., & Barton, N. H. (2011). The statistical mechanics of a polygenic character under stabilizing selection mutation and drift. Journal of the Royal Society Interface, 8(58), 720–739. https://doi.org/10.1098/rsif.2010.0438
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2011 | Journal Article | IST-REx-ID: 3376 | OA
Bollenbach, M. T., & Kishony, R. (2011). Resolution of gene regulatory conflicts caused by combinations of antibiotics. Molecular Cell, 42(4), 413–425. https://doi.org/10.1016/j.molcel.2011.04.016
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2011 | Journal Article | IST-REx-ID: 3377 | OA
Edelsbrunner, H., Morozov, D., & Patel, A. (2011). Quantifying transversality by measuring the robustness of intersections. Foundations of Computational Mathematics, 11(3), 345–361. https://doi.org/10.1007/s10208-011-9090-8
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2011 | Journal Article | IST-REx-ID: 3378
Bendich, P., & Harer, J. (2011). Persistent intersection homology. Foundations of Computational Mathematics, 11(3), 305–336. https://doi.org/10.1007/s10208-010-9081-1
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2011 | Journal Article | IST-REx-ID: 3379 | OA
Row, R., Maître, J.-L., Martin, B., Stockinger, P., Heisenberg, C.-P. J., & Kimelman, D. (2011). Completion of the epithelial to mesenchymal transition in zebrafish mesoderm requires Spadetail. Developmental Biology, 354(1), 102–110. https://doi.org/10.1016/j.ydbio.2011.03.025
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2011 | Journal Article | IST-REx-ID: 3380 | OA
Logeswaran, S., & Barton, N. H. (2011). Mapping Mendelian traits in asexual progeny using changes in marker allele frequency. Genetical Research, 93(3), 221–232. https://doi.org/10.1017/S0016672311000115
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2011 | Journal Article | IST-REx-ID: 3381 | OA
Henzinger, T. A., Jobstmann, B., & Wolf, V. (2011). Formalisms for specifying Markovian population models. IJFCS: International Journal of Foundations of Computer Science, 22(4), 823–841. https://doi.org/10.1142/S0129054111008441
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2011 | Journal Article | IST-REx-ID: 3382
Kroemer, O., Lampert, C., & Peters, J. (2011). Learning dynamic tactile sensing with robust vision based training. IEEE Transactions on Robotics, 27(3), 545–557. https://doi.org/10.1109/TRO.2011.2121130
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2011 | Journal Article | IST-REx-ID: 3383
Heisenberg, C.-P. J. (2011). Invited Lectures ‐ Symposia Area. FEBS Journal, 278(S1), 24–24. https://doi.org/10.1111/j.1742-4658.2011.08136.x
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2011 | Journal Article | IST-REx-ID: 3384 | OA
Tkačik, G., Garrigan, P., Ratliff, C., Milcinski, G., Klein, J., Seyfarth, L., … Balasubramanian, V. (2011). Natural images from the birthplace of the human eye. PLoS One, 6(6). https://doi.org/10.1371/journal.pone.0020409
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2011 | Journal Article | IST-REx-ID: 3385
Sixt, M. K. (2011). Interstitial locomotion of leukocytes. Immunology Letters, 138(1), 32–34. https://doi.org/10.1016/j.imlet.2011.02.013
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2011 | Journal Article | IST-REx-ID: 3386
Schrempf, A., Cremer, S., & Heinze, J. (2011). Social influence on age and reproduction reduced lifespan and fecundity in multi queen ant colonies. Journal of Evolutionary Biology, 24(7), 1455–1461. https://doi.org/10.1111/j.1420-9101.2011.02278.x
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2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok, A. (2011). Split based computation of majority rule supertrees. BMC Evolutionary Biology, 11(205). https://doi.org/10.1186/1471-2148-11-205
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2011 | Journal Article | IST-REx-ID: 3388 | OA
Ugelvig, L. V., Nielsen, P., Boomsma, J., & Nash, D. (2011). Reconstructing eight decades of genetic variation in an isolated Danish population of the large blue butterfly Maculinea arion. BMC Evolutionary Biology, 11(201). https://doi.org/10.1186/1471-2148-11-201
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2011 | Journal Article | IST-REx-ID: 3389
Blaschko, M., Shelton, J., Bartels, A., Lampert, C., & Gretton, A. (2011). Semi supervised kernel canonical correlation analysis with application to human fMRI. Pattern Recognition Letters, 32(11), 1572–1583. https://doi.org/10.1016/j.patrec.2011.02.011
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2011 | Journal Article | IST-REx-ID: 3390 | OA
Barton, N. H., & Etheridge, A. (2011). The relation between reproductive value and genetic contribution. Genetics, 188(4), 953–973. https://doi.org/10.1534/genetics.111.127555
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2011 | Journal Article | IST-REx-ID: 3391 | OA
de Vladar, H., & Barton, N. H. (2011). The contribution of statistical physics to evolutionary biology. Trends in Ecology and Evolution, 26(8), 424–432. https://doi.org/10.1016/j.tree.2011.04.002
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2011 | Journal Article | IST-REx-ID: 3392
Soriano, S., Hons, M., Schumann, K., Kumar, V., Dennier, T., Lyck, R., … Stein, J. (2011). In vivo analysis of uropod function during physiological T cell trafficking. Journal of Immunology, 187(5), 2356–2364. https://doi.org/10.4049/jimmunol.1100935
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2011 | Journal Article | IST-REx-ID: 3393 | OA
Barton, N. H., & Turelli, M. (2011). Spatial waves of advance with bistable dynamics: Cytoplasmic and genetic analogues of Allee effects. American Naturalist, 178(3), E48–E75. https://doi.org/10.1086/661246
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2011 | Journal Article | IST-REx-ID: 3394 | OA
Polechova, J., & Barton, N. H. (2011). Genetic drift widens the expected cline but narrows the expected cline width. Genetics, 189(1), 227–235. https://doi.org/10.1534/genetics.111.129817
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2011 | Journal Article | IST-REx-ID: 3395
Palero, F., Abello, P., Macpherson, E., Beaumont, M., & Pascual, M. (2011). Effect of oceanographic barriers and overfishing on the population genetic structure of the European spiny lobster Palinurus elephas . Biological Journal of the Linnean Society, 104(2), 407–418. https://doi.org/10.1111/j.1095-8312.2011.01728.x
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2011 | Journal Article | IST-REx-ID: 3396 | OA
Stockinger, P., Heisenberg, C.-P. J., & Maître, J.-L. (2011). Defective neuroepithelial cell cohesion affects tangential branchiomotor neuron migration in the zebrafish neural tube. Development, 138(21), 4673–4683. https://doi.org/10.1242/dev.071233
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2011 | Journal Article | IST-REx-ID: 3397 | OA
Maître, J.-L., & Heisenberg, C.-P. J. (2011). The role of adhesion energy in controlling cell-cell contacts. Current Opinion in Cell Biology, 23(5), 508–514. https://doi.org/10.1016/j.ceb.2011.07.004
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2011 | Journal Article | IST-REx-ID: 3399 | OA
Cremer, S., Schrempf, A., & Heinze, J. (2011). Competition and opportunity shape the reproductive tactics of males in the ant Cardiocondyla obscurior. PLoS One, 6(3). https://doi.org/10.1371/journal.pone.0017323
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2011 | Journal Article | IST-REx-ID: 3405 | OA
Janovjak, H. L., Sandoz, G., & Isacoff, E. (2011). Modern ionotropic glutamate receptor with a K+ selectivity signature sequence. Nature Communications, 2(232), 1–6. https://doi.org/10.1038/ncomms1231
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2011 | Journal Article | IST-REx-ID: 3429
Plachta, N., Bollenbach, M. T., Pease, S., Fraser, S., & Pantazis, P. (2011). Oct4 kinetics predict cell lineage patterning in the early mammalian embryo. Nature Cell Biology, 13(2), 117–123. https://doi.org/10.1038/ncb2154
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2011 | Journal Article | IST-REx-ID: 3505 | OA
Sixt, M. K., & Lämmermann, T. (2011). In vitro analysis of chemotactic leukocyte migration in 3D environments. Cell Migration, 769, 149–165. https://doi.org/10.1007/978-1-61779-207-6_11
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2011 | Journal Article | IST-REx-ID: 3771
Pavan, A., Martins, F., Santos, F., Ditchfield, A., & Fernandes Redondo, R. A. (2011). Patterns of diversification in two species of short-tailed bats (Carollia Gray, 1838): the effects of historical fragmentation of Brazilian rainforests. Biological Journal of the Linnean Society, 102(3), 527–539. https://doi.org/10.1111/j.1095-8312.2010.01601.x
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2011 | Journal Article | IST-REx-ID: 3778 | OA
Barton, N. H. (2011). Estimating linkage disequilibria. Heredity, 106(2), 205–206. https://doi.org/10.1038/hdy.2010.67
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2011 | Journal Article | IST-REx-ID: 3781
Fasy, B. T. (2011). The difference in length of curves in R^n. Acta Sci. Math. (Szeged), 77(1–2), 359–367.
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2011 | Journal Article | IST-REx-ID: 3784 | OA
Palero, F., Guerao, G., Clark, P., & Abello, P. (2011). Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description. Journal of the Marine Biological Association of the United Kingdom, 91(2), 485–492. https://doi.org/10.1017/S0025315410000287
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2011 | Book Chapter | IST-REx-ID: 3796 | OA
Edelsbrunner, H., & Kerber, M. (2011). Covering and packing with spheres by diagonal distortion in R^n. In C. Calude, G. Rozenberg, & A. Salomaa (Eds.), Rainbow of Computer Science (Vol. 6570, pp. 20–35). Springer. https://doi.org/10.1007/978-3-642-19391-0_2
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2011 | Book Chapter | IST-REx-ID: 3791
Krens, G., & Heisenberg, C.-P. J. (2011). Cell sorting in development. In M. Labouesse (Ed.), Forces and Tension in Development (Vol. 95, pp. 189–213). Elsevier. https://doi.org/10.1016/B978-0-12-385065-2.00006-2
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2010 | Journal Article | IST-REx-ID: 2409 | OA
Kupczok, A., Schmidt, H., & Von Haeseler, A. (2010). Accuracy of phylogeny reconstruction methods combining overlapping gene data sets . Algorithms for Molecular Biology, 5(1). https://doi.org/10.1186/1748-7188-5-37
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2010 | Thesis | IST-REx-ID: 3962
Pflicke, H. (2010).   Dendritic cell migration across basement membranes in the skin. IST Austria.
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2010 | Journal Article | IST-REx-ID: 4134
Bridle, J., Polechova, J., Kawata, M., & Butlin, R. (2010). Why is adaptation prevented at ecological margins? New insights from individual-based simulations. Ecology Letters, 13(4), 485–494. https://doi.org/10.1111/j.1461-0248.2010.01442.x
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2010 | Journal Article | IST-REx-ID: 4157 | OA
Papusheva, E., & Heisenberg, C.-P. J. (2010). Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis. EMBO Journal, 29(16), 2753–2768. https://doi.org/10.1038/emboj.2010.182
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2010 | Journal Article | IST-REx-ID: 4243 | OA
Barton, N. H., Etheridge, A., & Véber, A. (2010). A new model for evolution in a spatial continuum. Electronic Journal of Probability, 15(7), 162–216. https://doi.org/10.1214/EJP.v15-741
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2010 | Conference Paper | IST-REx-ID: 4361 | OA
Wies, T., Zufferey, D., & Henzinger, T. A. (2010). Forward analysis of depth-bounded processes. In L. Ong (Ed.) (Vol. 6014, pp. 94–108). Presented at the FoSSaCS: Foundations of Software Science and Computation Structures, Paphos, Cyprus: Springer. https://doi.org/10.1007/978-3-642-12032-9_8
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2010 | Conference Paper | IST-REx-ID: 4362
Singh, V. (2010). Runtime verification for software transactional memories. In O. Sokolsky, G. Rosu, N. Tilmann, H. Barringer, Y. Falcone, B. Finkbeiner, … G. Pace (Eds.) (Vol. 6418, pp. 421–435). Presented at the RV: International Conference on Runtime Verification, St. Julians, Malta: Springer. https://doi.org/10.1007/978-3-642-16612-9_32
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2010 | Conference Paper | IST-REx-ID: 4369 | OA
Nickovic, D., & Piterman, N. (2010). From MTL to deterministic timed automata. In T. A. Henzinger & K. Chatterjee (Eds.) (Vol. 6246, pp. 152–167). Presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Klosterneuburg, Austria: Springer. https://doi.org/10.1007/978-3-642-15297-9_13
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2010 | Conference Paper | IST-REx-ID: 4378 | OA
Kuncak, V., Piskac, R., Suter, P., & Wies, T. (2010). Building a calculus of data structures. In G. Barthe & M. Hermenegildo (Eds.) (Vol. 5944, pp. 26–44). Presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Madrid, Spain: Springer. https://doi.org/10.1007/978-3-642-11319-2_6
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2010 | Conference Paper | IST-REx-ID: 4380 | OA
Henzinger, T. A., Tomar, A., Singh, V., Wies, T., & Zufferey, D. (2010). A marketplace for cloud resources (pp. 1–8). Presented at the EMSOFT: Embedded Software , Arizona, USA: ACM. https://doi.org/10.1145/1879021.1879022
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2010 | Conference Paper | IST-REx-ID: 4381 | OA
Henzinger, T. A., Tomar, A., Singh, V., Wies, T., & Zufferey, D. (2010). FlexPRICE: Flexible provisioning of resources in a cloud environment (pp. 83–90). Presented at the CLOUD: Cloud Computing, Miami, USA: IEEE. https://doi.org/10.1109/CLOUD.2010.71
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2010 | Conference Paper | IST-REx-ID: 4382 | OA
Guerraoui, R., Henzinger, T. A., Kapalka, M., & Singh, V. (2010). Transactions in the jungle (pp. 263–272). Presented at the SPAA: ACM Symposium on Parallel Algorithms and Architectures, Santorini, Greece: ACM. https://doi.org/10.1145/1810479.1810529
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