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2720 Publications

2011 | Journal Article | IST-REx-ID: 3387 | OA
A. Kupczok, “Split based computation of majority rule supertrees,” BMC Evolutionary Biology, vol. 11, no. 205, 2011.
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2011 | Journal Article | IST-REx-ID: 3388 | OA
L. V. Ugelvig, P. Nielsen, J. Boomsma, and D. Nash, “Reconstructing eight decades of genetic variation in an isolated Danish population of the large blue butterfly Maculinea arion,” BMC Evolutionary Biology, vol. 11, no. 201, 2011.
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2011 | Journal Article | IST-REx-ID: 3389
M. Blaschko, J. Shelton, A. Bartels, C. Lampert, and A. Gretton, “Semi supervised kernel canonical correlation analysis with application to human fMRI,” Pattern Recognition Letters, vol. 32, no. 11, pp. 1572–1583, 2011.
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2011 | Journal Article | IST-REx-ID: 3390 | OA
N. H. Barton and A. Etheridge, “The relation between reproductive value and genetic contribution,” Genetics, vol. 188, no. 4, pp. 953–973, 2011.
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2011 | Journal Article | IST-REx-ID: 3391 | OA
H. de Vladar and N. H. Barton, “The contribution of statistical physics to evolutionary biology,” Trends in Ecology and Evolution, vol. 26, no. 8, pp. 424–432, 2011.
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2011 | Journal Article | IST-REx-ID: 3392
S. Soriano et al., “In vivo analysis of uropod function during physiological T cell trafficking,” Journal of Immunology, vol. 187, no. 5, pp. 2356–2364, 2011.
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2011 | Journal Article | IST-REx-ID: 3393 | OA
N. H. Barton and M. Turelli, “Spatial waves of advance with bistable dynamics: Cytoplasmic and genetic analogues of Allee effects,” American Naturalist, vol. 178, no. 3, pp. E48–E75, 2011.
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2011 | Journal Article | IST-REx-ID: 3394 | OA
J. Polechova and N. H. Barton, “Genetic drift widens the expected cline but narrows the expected cline width,” Genetics, vol. 189, no. 1, pp. 227–235, 2011.
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2011 | Journal Article | IST-REx-ID: 3395
F. Palero, P. Abello, E. Macpherson, M. Beaumont, and M. Pascual, “Effect of oceanographic barriers and overfishing on the population genetic structure of the European spiny lobster Palinurus elephas ,” Biological Journal of the Linnean Society, vol. 104, no. 2, pp. 407–418, 2011.
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2011 | Journal Article | IST-REx-ID: 3396 | OA
P. Stockinger, C.-P. J. Heisenberg, and J.-L. Maître, “Defective neuroepithelial cell cohesion affects tangential branchiomotor neuron migration in the zebrafish neural tube,” Development, vol. 138, no. 21, pp. 4673–4683, 2011.
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2011 | Journal Article | IST-REx-ID: 3397 | OA
J.-L. Maître and C.-P. J. Heisenberg, “The role of adhesion energy in controlling cell-cell contacts,” Current Opinion in Cell Biology, vol. 23, no. 5, pp. 508–514, 2011.
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2011 | Journal Article | IST-REx-ID: 3399 | OA
S. Cremer, A. Schrempf, and J. Heinze, “Competition and opportunity shape the reproductive tactics of males in the ant Cardiocondyla obscurior,” PLoS One, vol. 6, no. 3, 2011.
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2011 | Journal Article | IST-REx-ID: 3405 | OA
H. L. Janovjak, G. Sandoz, and E. Isacoff, “Modern ionotropic glutamate receptor with a K+ selectivity signature sequence,” Nature Communications, vol. 2, no. 232, pp. 1–6, 2011.
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2011 | Journal Article | IST-REx-ID: 3429
N. Plachta, M. T. Bollenbach, S. Pease, S. Fraser, and P. Pantazis, “Oct4 kinetics predict cell lineage patterning in the early mammalian embryo,” Nature Cell Biology, vol. 13, no. 2, pp. 117–123, 2011.
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2011 | Journal Article | IST-REx-ID: 3505 | OA
M. K. Sixt and T. Lämmermann, “In vitro analysis of chemotactic leukocyte migration in 3D environments,” Cell Migration, vol. 769, pp. 149–165, 2011.
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2011 | Journal Article | IST-REx-ID: 3771
A. Pavan, F. Martins, F. Santos, A. Ditchfield, and R. A. Fernandes Redondo, “Patterns of diversification in two species of short-tailed bats (Carollia Gray, 1838): the effects of historical fragmentation of Brazilian rainforests.,” Biological Journal of the Linnean Society, vol. 102, no. 3, pp. 527–539, 2011.
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2011 | Journal Article | IST-REx-ID: 3778 | OA
N. H. Barton, “Estimating linkage disequilibria,” Heredity, vol. 106, no. 2, pp. 205–206, 2011.
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2011 | Journal Article | IST-REx-ID: 3781
B. T. Fasy, “The difference in length of curves in R^n,” Acta Sci. Math. (Szeged), vol. 77, no. 1–2, pp. 359–367, 2011.
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2011 | Journal Article | IST-REx-ID: 3784 | OA
F. Palero, G. Guerao, P. Clark, and P. Abello, “Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description,” Journal of the Marine Biological Association of the United Kingdom, vol. 91, no. 2, pp. 485–492, 2011.
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2011 | Book Chapter | IST-REx-ID: 3791
G. Krens and C.-P. J. Heisenberg, “Cell sorting in development,” in Current Topics in Developmental Biology, vol. 95, M. Labouesse, Ed. Elsevier, 2011, pp. 189–213.
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2011 | Book Chapter | IST-REx-ID: 3796 | OA
H. Edelsbrunner and M. Kerber, “Covering and packing with spheres by diagonal distortion in R^n,” in Rainbow of Computer Science, vol. 6570, C. Calude, G. Rozenberg, and A. Salomaa, Eds. Springer, 2011, pp. 20–35.
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2011 | Journal Article | IST-REx-ID: 3965
B. Wang, H. Edelsbrunner, and D. Morozov, “Computing elevation maxima by searching the Gauss sphere,” Journal of Experimental Algorithmics, vol. 16, no. 2.2, pp. 1–13, 2011.
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2010 | Journal Article | IST-REx-ID: 2409 | OA
A. Kupczok, H. Schmidt, and A. Von Haeseler, “Accuracy of phylogeny reconstruction methods combining overlapping gene data sets ,” Algorithms for Molecular Biology, vol. 5, no. 1, 2010.
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2010 | Journal Article | IST-REx-ID: 4157 | OA
E. Papusheva and C.-P. J. Heisenberg, “Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis,” EMBO Journal, vol. 29, no. 16, pp. 2753–2768, 2010.
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2010 | Journal Article | IST-REx-ID: 4243 | OA
N. H. Barton, A. Etheridge, and A. Véber, “A new model for evolution in a spatial continuum,” Electronic Journal of Probability, vol. 15, no. 7, pp. 162–216, 2010.
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2010 | Conference Paper | IST-REx-ID: 4361 | OA
T. Wies, D. Zufferey, and T. A. Henzinger, “Forward analysis of depth-bounded processes,” presented at the FoSSaCS: Foundations of Software Science and Computation Structures, Paphos, Cyprus, 2010, vol. 6014, pp. 94–108.
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2010 | Conference Paper | IST-REx-ID: 4362
V. Singh, “Runtime verification for software transactional memories,” presented at the RV: International Conference on Runtime Verification, St. Julians, Malta, 2010, vol. 6418, pp. 421–435.
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2010 | Conference Paper | IST-REx-ID: 4369 | OA
D. Nickovic and N. Piterman, “From MTL to deterministic timed automata,” presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Klosterneuburg, Austria, 2010, vol. 6246, pp. 152–167.
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2010 | Conference Paper | IST-REx-ID: 4378 | OA
V. Kuncak, R. Piskac, P. Suter, and T. Wies, “Building a calculus of data structures,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Madrid, Spain, 2010, vol. 5944, pp. 26–44.
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2010 | Conference Paper | IST-REx-ID: 4380 | OA
T. A. Henzinger, A. Tomar, V. Singh, T. Wies, and D. Zufferey, “A marketplace for cloud resources,” presented at the EMSOFT: Embedded Software , Arizona, USA, 2010, pp. 1–8.
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2010 | Conference Paper | IST-REx-ID: 4381 | OA
T. A. Henzinger, A. Tomar, V. Singh, T. Wies, and D. Zufferey, “FlexPRICE: Flexible provisioning of resources in a cloud environment,” presented at the CLOUD: Cloud Computing, Miami, USA, 2010, pp. 83–90.
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2010 | Conference Paper | IST-REx-ID: 4382 | OA
R. Guerraoui, T. A. Henzinger, M. Kapalka, and V. Singh, “Transactions in the jungle,” presented at the SPAA: ACM Symposium on Parallel Algorithms and Architectures, Santorini, Greece, 2010, pp. 263–272.
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2010 | Conference Paper | IST-REx-ID: 4388 | OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, “GIST: A solver for probabilistic games,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 665–669.
View | Files available | DOI | arXiv
 
2010 | Conference Paper | IST-REx-ID: 4389 | OA
L. Doyen, T. A. Henzinger, A. Legay, and D. Nickovic, “Robustness of sequential circuits,” presented at the ACSD: Application of Concurrency to System Design, 2010, pp. 77–84.
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2010 | Conference Paper | IST-REx-ID: 4390 | OA
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, “Model checking of linearizability of concurrent list implementations,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 465–479.
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2010 | Book Chapter | IST-REx-ID: 4392
P. Cerny, T. A. Henzinger, and A. Radhakrishna, “Quantitative Simulation Games,” in Time For Verification: Essays in Memory of Amir Pnueli, vol. 6200, Z. Manna and D. Peled, Eds. Springer, 2010, pp. 42–60.
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2010 | Conference Paper | IST-REx-ID: 4393 | OA
P. Cerny, T. A. Henzinger, and A. Radhakrishna, “Simulation distances,” presented at the CONCUR: Concurrency Theory, Paris, France, 2010, vol. 6269, pp. 235–268.
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2010 | Conference Paper | IST-REx-ID: 4396 | OA
D. Beyer, T. A. Henzinger, G. Théoduloz, and D. Zufferey, “Shape refinement through explicit heap analysis,” presented at the FASE: Fundamental Approaches To Software Engineering, Paphos, Cyprus, 2010, vol. 6013, pp. 263–277.
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2010 | Journal Article | IST-REx-ID: 474
N. H. Barton, J. Kelleher, and A. Etheridge, “A new model for extinction and recolonization in two dimensions: Quantifying phylogeography,” Evolution, vol. 64, no. 9, pp. 2701–2715, 2010.
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2010 | Conference Paper | IST-REx-ID: 488 | OA
R. Alur and P. Cerny, “Expressiveness of streaming string transducers,” presented at the FSTTCS: Foundations of Software Technology and Theoretical Computer Science, Chennai, India, 2010, vol. 8, pp. 1–12.
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2010 | Conference Paper | IST-REx-ID: 489 | OA
J. Cristau, C. David, and F. Horn, “How do we remember the past in randomised strategies? ,” in Proceedings of GandALF 2010, Minori, Amalfi Coast, Italy, 2010, vol. 25, pp. 30–39.
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2010 | Journal Article | IST-REx-ID: 533
J. Hoenicke, K. Leino, A. Podelski, M. Schäf, and T. Wies, “Doomed program points,” Formal Methods in System Design, vol. 37, no. 2–3, pp. 171–199, 2010.
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2010 | Technical Report | IST-REx-ID: 5388 | OA
K. Chatterjee, P. Cerny, T. A. Henzinger, A. Radhakrishna, and R. Singh, Quantitative synthesis for concurrent programs. IST Austria, 2010.
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2010 | Technical Report | IST-REx-ID: 5389 | OA
P. Cerny, T. A. Henzinger, and A. Radhakrishna, Simulation distances. IST Austria, 2010.
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2010 | Technical Report | IST-REx-ID: 5390 | OA
K. Chatterjee and N. Fijalkow, Topological, automata-theoretic and logical characterization of finitary languages. IST Austria, 2010.
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2010 | Technical Report | IST-REx-ID: 5391 | OA
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, Model checking of linearizability of concurrent list implementations. IST Austria, 2010.
View | Files available | DOI
 
2010 | Journal Article | IST-REx-ID: 3303 | OA
D. Weissman, M. Feldman, and D. Fisher, “The rate of fitness-valley crossing in sexual populations,” Genetics, vol. 186, no. 4, pp. 1389–1410, 2010.
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2010 | Journal Article | IST-REx-ID: 3604
H. Senn, S. Goodman, G. Swanson, N. H. Barton, and J. Pemberton, “Investigating temporal changes in hybridisation and introgression between invasive sika (Cervus nippon) and native red deer (Cervus elaphus) on the Kintyre Peninsula, Scotland,” Molecular Ecology, vol. 19, no. 5, pp. 910–924, 2010.
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2010 | Journal Article | IST-REx-ID: 3718
J. Guzmán et al., “P2Y1 receptors inhibit long-term depression in the prefrontal cortex.,” Neuropharmacology, vol. 59, no. 6, pp. 406–415, 2010.
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2010 | Conference Paper | IST-REx-ID: 3719 | OA
J. Feret, T. A. Henzinger, H. Koeppl, and T. Petrov, “Lumpability abstractions of rule-based systems,” presented at the MECBIC: Membrane Computing and Biologically Inspired Process Calculi, Jena, Germany, 2010, vol. 40, pp. 142–161.
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