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3962 Publications

2016 | Journal Article | IST-REx-ID: 1794 | OA
Inference algorithms for pattern-based CRFs on sequence data
V. Kolmogorov, R. Takhanov, Algorithmica 76 (2016) 17–46.
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2016 | Journal Article | IST-REx-ID: 1833 | OA
On the closure of relational models
A. Klimova, T. Rudas, Journal of Multivariate Analysis 143 (2016) 440–452.
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2016 | Journal Article | IST-REx-ID: 1881 | OA
Extremal eigenvalues and eigenvectors of deformed Wigner matrices
J. Lee, K. Schnelli, Probability Theory and Related Fields 164 (2016) 165–241.
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2016 | Journal Article | IST-REx-ID: 1177 | OA
A closer look at multiple-forking: Leveraging (in)dependence for a tighter bound
C. Kamath Hosdurg, S. Chatterjee, Algorithmica 74 (2016) 1321–1362.
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2016 | Conference Paper | IST-REx-ID: 1179 | OA
Pseudoentropy: Lower-bounds for chain rules and transformations
K.Z. Pietrzak, S. Maciej, in:, Springer, 2016, pp. 183–203.
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2016 | Journal Article | IST-REx-ID: 1181
Neural stem cells to cerebral cortex: Emerging mechanisms regulating progenitor behavior and productivity
N. Dwyer, B. Chen, S. Chou, S. Hippenmeyer, L. Nguyen, T. Ghashghaei, Journal of Neuroscience 36 (2016) 11394–11401.
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2016 | Conference Paper | IST-REx-ID: 1182 | OA
Robust draws in balanced knockout tournaments
K. Chatterjee, R. Ibsen-Jensen, J. Tkadlec, in:, AAAI Press, 2016, pp. 172–179.
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2016 | Journal Article | IST-REx-ID: 1184 | OA
Mating and longevity in ant males
S. Metzler, J. Heinze, A. Schrempf, Ecology and Evolution 6 (2016) 8903–8906.
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2016 | Journal Article | IST-REx-ID: 1185
Cytokinin response factors integrate auxin and cytokinin pathways for female reproductive organ development
M. Cucinotta, S. Manrique, A. Guazzotti, N. Quadrelli, M. Mendes, E. Benková, L. Colombo, Development 143 (2016) 4419–4424.
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2016 | Journal Article | IST-REx-ID: 1186 | OA
Modular architecture and unique teichoic acid recognition features of choline-binding protein L CbpL contributing to pneumococcal pathogenesis
J. Gutierrez-Fernandez, M. Saleh, M. Alcorlo, A. Gómez Mejóa, D. Pantoja Uceda, M. Treviño, F. Vob, M. Abdullah, S. Galán Bartual, J. Seinen, P. Sánchez Murcia, F. Gago, M. Bruix, S. Hammerschmidt, J. Hermoso, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1188 | OA
Asymptotic analysis of noisy fitness maximization, applied to metabolism & growth
D. De Martino, D. Masoero, Journal of Statistical Mechanics: Theory and Experiment 2016 (2016).
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2016 | Conference Paper | IST-REx-ID: 1193 | OA
Commutativity in the algorithmic Lovasz local lemma
V. Kolmogorov, in:, Proceedings - Annual IEEE Symposium on Foundations of Computer Science, IEEE, 2016.
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2016 | Journal Article | IST-REx-ID: 1195 | OA
Reconstruction of haplotype-blocks selected during experimental evolution.
S. Franssen, N.H. Barton, C. Schlötterer, Molecular Biology and Evolution 34 (2016) 174–184.
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2016 | Journal Article | IST-REx-ID: 1200 | OA
Only the combination of mathematics and agent based simulations can leverage the full potential of evolutionary modeling: Comment on “Evolutionary game theory using agent-based methods” by C. Adami, J. Schossau and A. Hintze
C. Hilbe, A. Traulsen, Physics of Life Reviews 19 (2016) 29–31.
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2016 | Journal Article | IST-REx-ID: 1201
Formin’ a nuclear protection
J. Renkawitz, M.K. Sixt, Cell 167 (2016) 1448–1449.
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2016 | Journal Article | IST-REx-ID: 1202 | OA
Immune priming in arthropods: an update focusing on the red flour beetle
B. Milutinovic, R. Peuß, K. Ferro, J. Kurtz, Zoology 119 (2016) 254–261.
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2016 | Journal Article | IST-REx-ID: 1203 | OA
Comparative genomic analysis of Haemophilus haemolyticus and nontypeable Haemophilus influenzae and a new testing scheme for their discrimination
F. Hu, L. Rishishwar, A. Sivadas, G. Mitchell, J. King, T. Murphy, J. Gilsdorf, L. Mayer, X. Wang, Journal of Clinical Microbiology 54 (2016) 3010–3017.
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2016 | Journal Article | IST-REx-ID: 1204 | OA
Surprises in numerical expressions of physical constants
A. Amir, M. Lemeshko, T. Tokieda, American Mathematical Monthly 123 (2016) 609–612.
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2016 | Conference Paper | IST-REx-ID: 1205 | OA
Safety assured formal model driven design of the multifunction vehicle bus controller
Y. Jiang, H. Liu, H. Song, H. Kong, M. Gu, J. Sun, L. Sha, in:, Springer, 2016, pp. 757–763.
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2016 | Journal Article | IST-REx-ID: 1206 | OA
Libration of strongly oriented polar molecules inside a superfluid
E. Redchenko, M. Lemeshko, ChemPhysChem 17 (2016) 3649–3654.
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2016 | Journal Article | IST-REx-ID: 1209 | OA
Purification of ovine respiratory complex i results in a highly active and stable preparation
J.A. Letts, G. Degliesposti, K. Fiedorczuk, M. Skehel, L.A. Sazanov, Journal of Biological Chemistry 291 (2016) 24657–24675.
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2016 | Book Chapter | IST-REx-ID: 1210
Real time analysis of the apical hook development
Q. Zhu, P. Žádníková, D. Smet, D. Van Der Straeten, E. Benková, in:, Plant Hormones, Humana Press, 2016, pp. 1–8.
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2016 | Journal Article | IST-REx-ID: 1212 | OA
Termination of shoot gravitropic responses by auxin feedback on PIN3 polarity
H. Rakusová, M. Abbas, H. Han, S. Song, H. Robert, J. Friml, Current Biology 26 (2016) 3026–3032.
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2016 | Conference Paper | IST-REx-ID: 1214
Compliant control for soft robots: Emergent behavior of a tendon driven anthropomorphic arm
G.S. Martius, R. Hostettler, A. Knoll, R. Der, in:, IEEE, 2016.
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2016 | Journal Article | IST-REx-ID: 1216 | OA
Acceleration feature points of unsteady shear flows
J. Kasten, J. Reininghaus, I. Hotz, H. Hege, B. Noack, G. Daviller, M. Morzyński, Archives of Mechanics 68 (2016) 55–80.
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2016 | Journal Article | IST-REx-ID: 1217
Efficient T-cell priming and activation requires signaling through prostaglandin E2 (EP) receptors
V. Sreeramkumar, M. Hons, C. Punzón, J. Stein, D. Sancho, M. Fresno Forcelledo, N. Cuesta, Immunology and Cell Biology 94 (2016) 39–51.
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2016 | Journal Article | IST-REx-ID: 1218 | OA
Culturing synechocystis sp. Strain pcc 6803 with N2 and CO2 in a diel regime reveals multiphase glycogen dynamics with low maintenance costs
A. Angermayr, P. Van Alphen, D. Hasdemir, G. Kramer, M. Iqbal, W. Van Grondelle, H. Hoefsloot, Y. Choi, K. Hellingwerf, Applied and Environmental Microbiology 82 (2016) 4180–4189.
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2016 | Journal Article | IST-REx-ID: 1219 | OA
Bulk universality for deformed wigner matrices
J. Lee, K. Schnelli, B. Stetler, H. Yau, Annals of Probability 44 (2016) 2349–2425.
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2016 | Conference Paper | IST-REx-ID: 1220 | OA
Fuselage boundary layer ingestion propulsion applied to a thin haul commuter aircraft for optimal efficiency
G. Mikić, A. Stoll, J. Bevirt, R. Grah, M. Moore, in:, AIAA, 2016, pp. 1–19.
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2016 | Journal Article | IST-REx-ID: 1221 | OA
Strong morphological defects in conditional Arabidopsis abp1 knock-down mutants generated in absence of functional ABP1 protein
J. Michalko, M. Glanc, C. Perrot Rechenmann, J. Friml, F1000 Research 5 (2016).
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2016 | Journal Article | IST-REx-ID: 1222 | OA
Optimal packings of congruent circles on a square flat torus
O. Musin, A. Nikitenko, Discrete & Computational Geometry 55 (2016) 1–20.
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2016 | Journal Article | IST-REx-ID: 1223 | OA
Localization for transversally periodic random potentials on binary trees
R. Froese, D. Lee, C. Sadel, W. Spitzer, G. Stolz, Journal of Spectral Theory 6 (2016) 557–600.
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2016 | Journal Article | IST-REx-ID: 1224
The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant
Z. Teitel, M. Pickup, D. Field, S. Barrett, Plant Biology 18 (2016) 98–103.
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2016 | Conference Paper | IST-REx-ID: 1225 | OA
Practical round-optimal blind signatures in the standard model from weaker assumptions
G. Fuchsbauer, C. Hanser, C. Kamath Hosdurg, D. Slamanig, in:, Springer, 2016, pp. 391–408.
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2016 | Journal Article | IST-REx-ID: 1226 | OA
Atomic structure of the entire mammalian mitochondrial complex i
K. Fiedorczuk, J.A. Letts, G. Degliesposti, K. Kaszuba, M. Skehel, L.A. Sazanov, Nature 538 (2016) 406–410.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2016 | Conference Paper | IST-REx-ID: 1227 | OA
Discrete abstraction of multiaffine systems
H. Kong, E. Bartocci, S. Bogomolov, R. Grosu, T.A. Henzinger, Y. Jiang, C. Schilling, in:, Springer, 2016, pp. 128–144.
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2016 | Conference Paper | IST-REx-ID: 1229 | OA
Offline witness encryption
H.M. Abusalah, G. Fuchsbauer, K.Z. Pietrzak, in:, Springer, 2016, pp. 285–303.
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2016 | Conference Paper | IST-REx-ID: 1230 | OA
Abstraction-driven concolic testing
P. Daca, A. Gupta, T.A. Henzinger, in:, Springer, 2016, pp. 328–347.
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2016 | Conference Paper | IST-REx-ID: 1231 | OA
On the complexity of scrypt and proofs of space in the parallel random oracle model
J.F. Alwen, B. Chen, C. Kamath Hosdurg, V. Kolmogorov, K.Z. Pietrzak, S. Tessaro, in:, Springer, 2016, pp. 358–387.
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2016 | Journal Article | IST-REx-ID: 1232
The architecture of respiratory supercomplexes
J.A. Letts, K. Fiedorczuk, L.A. Sazanov, Nature 537 (2016) 644–648.
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2016 | Conference Paper | IST-REx-ID: 1233 | OA
Standard security does imply security against selective opening for markov distributions
G. Fuchsbauer, F. Heuer, E. Kiltz, K.Z. Pietrzak, in:, Springer, 2016, pp. 282–305.
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2016 | Conference Paper | IST-REx-ID: 1234 | OA
Faster statistical model checking for unbounded temporal properties
P. Daca, T.A. Henzinger, J. Kretinsky, T. Petrov, in:, Springer, 2016, pp. 112–129.
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2016 | Conference Paper | IST-REx-ID: 1235 | OA
Constrained PRFs for unbounded inputs with short keys
H.M. Abusalah, G. Fuchsbauer, in:, Springer, 2016, pp. 445–463.
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2016 | Conference Paper | IST-REx-ID: 1236 | OA
Constrained PRFs for unbounded inputs
H.M. Abusalah, G. Fuchsbauer, K.Z. Pietrzak, in:, Springer, 2016, pp. 413–428.
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2016 | Conference Paper | IST-REx-ID: 1237
Computation of cubical Steenrod squares
M. Krcál, P. Pilarczyk, in:, Springer, 2016, pp. 140–151.
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2016 | Journal Article | IST-REx-ID: 1238 | OA
Endosomal interactions during root hair growth
D. von Wangenheim, A. Rosero, G. Komis, O. Šamajová, M. Ovečka, B. Voigt, J. Šamaj, Frontiers in Plant Science 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1239
Cortical flow-driven shapes of nonadherent cells
A. Callan Jones, V. Ruprecht, S. Wieser, C.-P.J. Heisenberg, R. Voituriez, Physical Review Letters 116 (2016).
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2016 | Journal Article | IST-REx-ID: 1240 | OA
Long non-coding RNAs display higher natural expression variation than protein-coding genes in healthy humans
A. Kornienko, C. Dotter, P. Guenzl, H. Gisslinger, B. Gisslinger, C. Cleary, R. Kralovics, F. Pauler, D. Barlow, Genome Biology 17 (2016).
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2016 | Journal Article | IST-REx-ID: 1241 | OA
The role of recombination in evolutionary rescue
H. Uecker, J. Hermisson, Genetics 202 (2016) 721–732.
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2016 | Journal Article | IST-REx-ID: 1242 | OA
Extending the dynamic range of transcription factor action by translational regulation
T.R. Sokolowski, A. Walczak, W. Bialek, G. Tkačik, Physical Review E Statistical Nonlinear and Soft Matter Physics 93 (2016).
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