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168 Publications

2015 | Journal Article | IST-REx-ID: 1666   OA
Tugrul, M., Paixao, T., Barton, N. H., & Tkacik, G. (2015). Dynamics of transcription factor binding site evolution. PLoS Genetics, 11(11). https://doi.org/10.1371/journal.pgen.1005639
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2015 | Journal Article | IST-REx-ID: 1818   OA
Polechova, J., & Barton, N. H. (2015). Limits to adaptation along environmental gradients. PNAS, 112(20), 6401–6406. https://doi.org/10.1073/pnas.1421515112
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2015 | Journal Article | IST-REx-ID: 1851   OA
Priklopil, T., Kisdi, E., & Gyllenberg, M. (2015). Evolutionarily stable mating decisions for sequentially searching females and the stability of reproductive isolation by assortative mating. Evolution, 69(4), 1015–1026. https://doi.org/10.1111/evo.12618
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2015 | Journal Article | IST-REx-ID: 1542   OA
Paixao, T., Badkobeh, G., Barton, N. H., Çörüş, D., Dang, D., Friedrich, T., … Trubenova, B. (2015). Toward a unifying framework for evolutionary processes. Journal of Theoretical Biology, 383, 28–43. https://doi.org/10.1016/j.jtbi.2015.07.011
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2015 | Journal Article | IST-REx-ID: 1681   OA
Priklopil, T., & Chatterjee, K. (2015). Evolution of decisions in population games with sequentially searching individuals. Games, 6(4), 413–437. https://doi.org/10.3390/g6040413
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2015 | Journal Article | IST-REx-ID: 1883   OA
Keller-Schmidt, S., Tugrul, M., Eguíluz, V., Hernandez Garcia, E., & Klemm, K. (2015). Anomalous scaling in an age-dependent branching model. Physical Review E Statistical Nonlinear and Soft Matter Physics, 91(2), 022803. https://doi.org/10.1103/PhysRevE.91.022803
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2015 | Conference Paper | IST-REx-ID: 1430   OA
Paixao, T., Sudholt, D., Heredia, J., & Trubenova, B. (2015). First steps towards a runtime comparison of natural and artificial evolution. In Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation (pp. 1455–1462). Madrid, Spain: ACM. https://doi.org/10.1145/2739480.2754758
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2015 | Journal Article | IST-REx-ID: 1699   OA
Uecker, H., Setter, D., & Hermisson, J. (2015). Adaptive gene introgression after secondary contact. Journal of Mathematical Biology, 70(7), 1523–1580. https://doi.org/10.1007/s00285-014-0802-y
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2015 | Journal Article | IST-REx-ID: 1703
Broadhurst, L., Fifield, G., Vanzella, B., & Pickup, M. (2015). An evaluation of the genetic structure of seed sources and the maintenance of genetic diversity during establishment of two yellow box (Eucalyptus melliodora) seed-production areas. Australian Journal of Botany, 63(5), 455–466. https://doi.org/10.1071/BT15023
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2015 | Journal Article | IST-REx-ID: 1809   OA
Trubenova, B., Novak, S., & Hager, R. (2015). Indirect genetic effects and the dynamics of social interactions. PLoS One, 10(5). https://doi.org/10.1371/journal.pone.0126907
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2015 | Conference Paper | IST-REx-ID: 1835   OA
Giacobbe, M., Guet, C. C., Gupta, A., Henzinger, T. A., Paixao, T., & Petrov, T. (2015). Model checking gene regulatory networks. Presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, London, United Kingdom: Springer. https://doi.org/10.1007/978-3-662-46681-0_47
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2015 | Journal Article | IST-REx-ID: 1519   OA
Barton, N. H., & Servedio, M. (2015). The interpretation of selection coefficients. Evolution, 69(5), 1101–1112. https://doi.org/10.1111/evo.12641
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2015 | Journal Article | IST-REx-ID: 1850   OA
Novak, S., & Cremer, S. (2015). Fungal disease dynamics in insect societies: Optimal killing rates and the ambivalent effect of high social interaction rates. Journal of Theoretical Biology, 372(5), 54–64. https://doi.org/10.1016/j.jtbi.2015.02.018
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2014 | Journal Article | IST-REx-ID: 2169   OA
Barton, N. H., Novak, S., & Paixao, T. (2014). Diverse forms of selection in evolution and computer science. PNAS, 111(29), 10398–10399. https://doi.org/10.1073/pnas.1410107111
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2014 | Journal Article | IST-REx-ID: 1908   OA
Weissman, D., & Hallatschek, O. (2014). The rate of adaptation in large sexual populations with linear chromosomes. Genetics, 196(4), 1167–1183. https://doi.org/10.1534/genetics.113.160705
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2014 | Journal Article | IST-REx-ID: 1896   OA
Kollár, R., Bod’ová, K., Nosek, J., & Tomáška, Ľ. (2014). Mathematical model of alternative mechanism of telomere length maintenance. Physical Review E Statistical Nonlinear and Soft Matter Physics, 89(3). https://doi.org/10.1103/PhysRevE.89.032701
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2014 | Journal Article | IST-REx-ID: 1909   OA
Ezard, T., Prizak, R., & Hoyle, R. (2014). The fitness costs of adaptation via phenotypic plasticity and maternal effects. Functional Ecology, 28(3), 693–701. https://doi.org/10.1111/1365-2435.12207
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2014 | Journal Article | IST-REx-ID: 537   OA
Prizak, R., Ezard, T., & Hoyle, R. (2014). Fitness consequences of maternal and grandmaternal effects. Ecology and Evolution, 4(15), 3139–3145. https://doi.org/10.1002/ece3.1150
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2014 | Journal Article | IST-REx-ID: 1936   OA
Arbilly, M., Weissman, D., Feldman, M., & Grodzinski, U. (2014). An arms race between producers and scroungers can drive the evolution of social cognition. Behavioral Ecology, 25(3), 487–495. https://doi.org/10.1093/beheco/aru002
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2014 | Journal Article | IST-REx-ID: 2023   OA
Novak, S. (2014). Habitat heterogeneities versus spatial type frequency variances as driving forces of dispersal evolution. Ecology and Evolution, 4(24), 4589–4597. https://doi.org/10.1002/ece3.1289
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2014 | Journal Article | IST-REx-ID: 2174   OA
De Vladar, H., & Barton, N. H. (2014). Stability and response of polygenic traits to stabilizing selection and mutation. Genetics, 197(2), 749–767. https://doi.org/10.1534/genetics.113.159111
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2014 | Journal Article | IST-REx-ID: 1932   OA
Trotter, M., Weissman, D., Peterson, G., Peck, K., & Masel, J. (2014). Cryptic genetic variation can make "irreducible complexity" a common mode of adaptation in sexual populations. Evolution, 68(12), 3357–3367. https://doi.org/10.1111/evo.12517
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2014 | Journal Article | IST-REx-ID: 2168   OA
Kelleher, J., Etheridge, A., & Barton, N. H. (2014). Coalescent simulation in continuous space: Algorithms for large neighbourhood size. Theoretical Population Biology, 95, 13–23. https://doi.org/10.1016/j.tpb.2014.05.001
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2014 | Journal Article | IST-REx-ID: 2170   OA
Hearn, J., Stone, G., Bunnefeld, L., Nicholls, J., Barton, N. H., & Lohse, K. (2014). Likelihood-based inference of population history from low-coverage de novo genome assemblies. Molecular Ecology, 23(1), 198–211. https://doi.org/10.1111/mec.12578
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2013 | Journal Article | IST-REx-ID: 2823
Pickup, M., Wilson, S., Freudenberger, D., Nicholls, N., Gould, L., Hnatiuk, S., & Delandre, J. (2013). Post-fire recovery of revegetated woodland communities in south-eastern Australia. Austral Ecology, 38(3), 300–312. https://doi.org/10.1111/j.1442-9993.2012.02404.x
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2013 | Journal Article | IST-REx-ID: 2842   OA
Barton, N. H., Etheridge, A., Kelleher, J., & Véber, A. (2013). Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks. Theoretical Population Biology, 87(1), 105–119. https://doi.org/10.1016/j.tpb.2013.03.001
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2013 | Journal Article | IST-REx-ID: 2944
Aeschbacher, S., Futschik, A., & Beaumont, M. (2013). Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates. . Molecular Ecology, 22(4), 987–1002. https://doi.org/10.1111/mec.12165
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2013 | Journal Article | IST-REx-ID: 2817   OA
Novak, S., Chatterjee, K., & Nowak, M. (2013). Density games. Journal of Theoretical Biology, 334, 26–34. https://doi.org/10.1016/j.jtbi.2013.05.029
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2013 | Book Chapter | IST-REx-ID: 2907   OA
Barton, N. H. (2013). Recombination and sex. In The Princeton Guide to Evolution (pp. 328–333). Princeton University Press.
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2013 | Journal Article | IST-REx-ID: 450   OA
Pickup, M., Field, D., Rowell, D., & Young, A. (2013). Source population characteristics affect heterosis following genetic rescue of fragmented plant populations. Proceedings of the Royal Society of London Series B Biological Sciences, 280(1750). https://doi.org/10.1098/rspb.2012.2058
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2013 | Journal Article | IST-REx-ID: 2287   OA
Pickup, M., & Barrett, S. (2013). The influence of demography and local mating environment on sex ratios in a wind-pollinated dioecious plant. Ecology and Evolution, 3(3), 629–639. https://doi.org/10.1002/ece3.465
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2013 | Conference Paper | IST-REx-ID: 2718   OA
Barton, N. H., & Paixao, T. (2013). Can quantitative and population genetics help us understand evolutionary computation? In Proceedings of the 15th annual conference on Genetic and evolutionary computation (pp. 1573–1580). Amsterdam, Netherlands: ACM. https://doi.org/10.1145/2463372.2463568
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2013 | Journal Article | IST-REx-ID: 2720   OA
Long, H., Paixao, T., Azevedo, R., & Zufall, R. (2013). Accumulation of spontaneous mutations in the ciliate Tetrahymena thermophila. Genetics, 195(2), 527–540. https://doi.org/10.1534/genetics.113.153536
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2013 | Journal Article | IST-REx-ID: 2908   OA
Barton, N. H. (2013). Does hybridisation influence speciation?  . Journal of Evolutionary Biology, 26(2), 267–269. https://doi.org/10.1111/jeb.12015
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2013 | Journal Article | IST-REx-ID: 2910   OA
Kelleher, J., Barton, N. H., & Etheridge, A. (2013). Coalescent simulation in continuous space. Bioinformatics, 29(7), 955–956. https://doi.org/10.1093/bioinformatics/btt067
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2013 | Journal Article | IST-REx-ID: 2473   OA
Barton, N. H., Etheridge, A., Kelleher, J., & Véber, A. (2013). Genetic hitch-hiking in spatially extended populations. Theoretical Population Biology, 87(8), 75–89. https://doi.org/10.1016/j.tpb.2012.12.001
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2013 | Conference Paper | IST-REx-ID: 2719
Paixao, T., & Barton, N. H. (2013). A variance decomposition approach to the analysis of genetic algorithms. In Proceedings of the 15th annual conference on Genetic and evolutionary computation (pp. 845–852). Amsterdam, Netherlands: ACM. https://doi.org/10.1145/2463372.2463470
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2013 | Journal Article | IST-REx-ID: 2909   OA
Barton, N. H., Etheridge, A., & Véber, A. (2013). Modelling evolution in a spatial continuum. Journal of Statistical Mechanics Theory and Experiment, 2013(1). https://doi.org/10.1088/1742-5468/2013/01/P01002
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2012 | Journal Article | IST-REx-ID: 2917
Vladar, H. (2012). The game of active search for extra terrestrial intelligence Breaking the Great Silence . International Journal of Astrobiology, 12(1), 53–62. https://doi.org/10.1017/S1473550412000407
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2012 | Journal Article | IST-REx-ID: 2962   OA
Aeschbacher, S., Beaumont, M., & Futschik, A. (2012). A novel approach for choosing summary statistics in approximate Bayesian computation. Genetics, 192(3), 1027–1047. https://doi.org/10.1534/genetics.112.143164
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2012 | Journal Article | IST-REx-ID: 3131   OA
Weissman, D., & Barton, N. H. (2012). Limits to the rate of adaptive substitution in sexual populations. PLoS Genetics, 8(6). https://doi.org/10.1371/journal.pgen.1002740
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2012 | Journal Article | IST-REx-ID: 2968   OA
Lohse, K., Barton, N. H., Melika, G., & Stone, G. (2012). A likelihood based comparison of population histories in a parasitoid guild. Molecular Ecology, 21(18), 4605–4617. https://doi.org/10.1111/j.1365-294X.2012.05700.x
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2012 | Book Chapter | IST-REx-ID: 3277
de Vladar, H., & Chela Flores, J. (2012). Can the evolution of multicellularity be anticipated in the exploration of the solar system? In Life on Earth and other planetary bodies (Vol. 24, pp. 387–405). Springer. https://doi.org/10.1007/978-94-007-4966-5_22
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2012 | Journal Article | IST-REx-ID: 498   OA
Pickup, M., Field, D., Rowell, D., & Young, A. (2012). Predicting local adaptation in fragmented plant populations: Implications for restoration genetics. Evolutionary Applications, 5(8), 913–924. https://doi.org/10.1111/j.1752-4571.2012.00284.x
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2012 | Journal Article | IST-REx-ID: 3122
Field, D., & Barrett, S. (2012). Disassortative mating and the maintenance of sexual polymorphism in painted maple. Molecular Ecology, 21(15), 3640–3643. https://doi.org/10.1111/j.1365-294X.2012.05643.x
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2012 | Journal Article | IST-REx-ID: 3166   OA
Vladar, H. (2012). Amino acid fermentation at the origin of the genetic code. Biology Direct, 7. https://doi.org/10.1186/1745-6150-7-6
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2011 | Journal Article | IST-REx-ID: 3390   OA
Barton, N. H., & Etheridge, A. (2011). The relation between reproductive value and genetic contribution. Genetics, 188(4), 953–973. https://doi.org/10.1534/genetics.111.127555
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2011 | Journal Article | IST-REx-ID: 3395
Palero, F., Abello, P., Macpherson, E., Beaumont, M., & Pascual, M. (2011). Effect of oceanographic barriers and overfishing on the population genetic structure of the European spiny lobster Palinurus elephas . Biological Journal of the Linnean Society, 104(2), 407–418. https://doi.org/10.1111/j.1095-8312.2011.01728.x
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2011 | Journal Article | IST-REx-ID: 3290   OA
Lohse, K., Harrison, R., & Barton, N. H. (2011). A general method for calculating likelihoods under the coalescent process. Genetics, 189(3), 977–987. https://doi.org/10.1534/genetics.111.129569
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2011 | Journal Article | IST-REx-ID: 3372   OA
Abbot, P., Abe, J., Alcock, J., Alizon, S., Alpedrinha, J., Andersson, M., … Zink, A. (2011). Inclusive fitness theory and eusociality. Nature, 471(7339), E1–E4. https://doi.org/10.1038/nature09831
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