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172 Publications

2017 | Journal Article | IST-REx-ID: 1351 | OA
Model checking the evolution of gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.
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2017 | Journal Article | IST-REx-ID: 1063 | OA View | DOI | Download Submitted Version (ext.)
 
2017 | Journal Article | IST-REx-ID: 1074 | OA
Inferring recent demography from isolation by distance of long shared sequence blocks
H. Ringbauer, G. Coop, N.H. Barton, Genetics 205 (2017) 1335–1351.
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2017 | Journal Article | IST-REx-ID: 1077 | OA
Evolutionary interplay between structure, energy and epistasis in the coat protein of the fX174 phage family
R.A. Fernandes Redondo, H. Vladar, T. Włodarski, J.P. Bollback, Journal of the Royal Society Interface 14 (2017).
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2017 | Journal Article | IST-REx-ID: 1111 | OA
Selection limits to adaptive walks on correlated landscapes
J. Heredia, B. Trubenova, D. Sudholt, T. Paixao, Genetics 205 (2017) 803–825.
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2017 | Conference Paper | IST-REx-ID: 1112
An application of stochastic differential equations to evolutionary algorithms
T. Paixao, J. Pérez Heredia, in:, Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, ACM, 2017, pp. 3–11.
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2017 | Journal Article | IST-REx-ID: 1169 | OA
Spatial gene frequency waves under genotype dependent dispersal
S. Novak, R. Kollár, Genetics 205 (2017) 367–374.
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2017 | Journal Article | IST-REx-ID: 1191 | OA
Existence of traveling waves for the generalized F–KPP equation
R. Kollár, S. Novak, Bulletin of Mathematical Biology 79 (2017) 525–559.
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2017 | Journal Article | IST-REx-ID: 570 | OA
Regulatory network structure determines patterns of intermolecular epistasis
M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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2017 | Journal Article | IST-REx-ID: 611
Evolution of flower color pattern through selection on regulatory small RNAs
D. Bradley, P. Xu, I. Mohorianu, A. Whibley, D. Field, H. Tavares, M. Couchman, L. Copsey, R. Carpenter, M. Li, Q. Li, Y. Xue, T. Dalmay, E. Coen, Science 358 (2017) 925–928.
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2017 | Journal Article | IST-REx-ID: 614 | OA
The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W
C. Fraisse, M.A.L. Picard, B. Vicoso, Nature Communications 8 (2017).
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2017 | Research Data | IST-REx-ID: 7163 | OA
Supplementary Files for "The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W"
C. Fraisse, Supplementary Files for “The Deep Conservation of the Lepidoptera Z Chromosome Suggests a Non Canonical Origin of the W,” IST Austria, 2017.
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2017 | Journal Article | IST-REx-ID: 626 | OA
The infinitesimal model: Definition derivation and implications
N.H. Barton, A. Etheridge, A. Véber, Theoretical Population Biology 118 (2017) 50–73.
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2017 | Journal Article | IST-REx-ID: 696 | OA
Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes
M. Lukacisinova, S. Novak, T. Paixao, PLoS Computational Biology 13 (2017).
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2017 | Journal Article | IST-REx-ID: 910 | OA
When does frequency-independent selection maintain genetic variation?
S. Novak, N.H. Barton, Genetics 207 (2017) 653–668.
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2017 | Journal Article | IST-REx-ID: 955 | OA
Evolution of new regulatory functions on biophysically realistic fitness landscapes
T. Friedlander, R. Prizak, N.H. Barton, G. Tkačik, Nature Communications 8 (2017).
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2017 | Journal Article | IST-REx-ID: 951 | OA
Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology 15 (2017).
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2017 | Journal Article | IST-REx-ID: 952 | OA
Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti
M. Turelli, N.H. Barton, Theoretical Population Biology 115 (2017) 45–60.
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2017 | Journal Article | IST-REx-ID: 953 | OA
The sources of adaptive evolution
D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
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2017 | Journal Article | IST-REx-ID: 954 | OA
On the mechanistic nature of epistasis in a canonical cis-regulatory element
M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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2017 | Journal Article | IST-REx-ID: 990 | OA
Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow
H. Sachdeva, N.H. Barton, Evolution; International Journal of Organic Evolution 71 (2017) 1478–1493.
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2016 | Research Data | IST-REx-ID: 5551 | OA
Data on pollinator observations and offpsring phenotypes
T. Ellis, Data on Pollinator Observations and Offpsring Phenotypes, IST Austria, 2016.
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2016 | Research Data | IST-REx-ID: 5552 | OA
Pollinator visitation data for wild Antirrhinum majus plants, with phenotypic and frequency data.
T. Ellis, Pollinator Visitation Data for Wild Antirrhinum Majus Plants, with Phenotypic and Frequency Data., IST Austria, 2016.
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2016 | Research Data | IST-REx-ID: 5553 | OA
Inference of mating patterns among wild snapdragons in a natural hybrid zone in 2012
D. Field, T. Ellis, Inference of Mating Patterns among Wild Snapdragons in a Natural Hybrid Zone in 2012, IST Austria, 2016.
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2016 | Research Data | IST-REx-ID: 5554 | OA
Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase
M. Tugrul, Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase, IST Austria, 2016.
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2016 | Thesis | IST-REx-ID: 1398 | OA
The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone
T. Ellis, The Role of Pollinator-Mediated Selection in the Maintenance of a Flower Color Polymorphism in an Antirrhinum Majus Hybrid Zone, IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1224
The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant
Z. Teitel, M. Pickup, D. Field, S. Barrett, Plant Biology 18 (2016) 98–103.
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2016 | Journal Article | IST-REx-ID: 1195 | OA
Reconstruction of haplotype-blocks selected during experimental evolution.
S. Franssen, N.H. Barton, C. Schlötterer, Molecular Biology and Evolution 34 (2016) 174–184.
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2016 | Journal Article | IST-REx-ID: 1358 | OA
Intrinsic limits to gene regulation by global crosstalk
T. Friedlander, R. Prizak, C.C. Guet, N.H. Barton, G. Tkačik, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1359 | OA
The effect of gene interactions on the long-term response to selection
T. Paixao, N.H. Barton, PNAS 113 (2016) 4422–4427.
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2016 | Conference Paper | IST-REx-ID: 1349 | OA
When non-elitism outperforms elitism for crossing fitness valleys
P. Oliveto, T. Paixao, J. Heredia, D. Sudholt, B. Trubenova, in:, Proceedings of the Genetic and Evolutionary Computation Conference 2016 , ACM, 2016, pp. 1163–1170.
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2016 | Journal Article | IST-REx-ID: 1356 | OA View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1357 | OA
Richard Hudson and Norman Kaplan on the coalescent process
N.H. Barton, Genetics 202 (2016) 865–866.
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2016 | Journal Article | IST-REx-ID: 1631 | OA
Spread of pedigree versus genetic ancestry in spatially distributed populations
J. Kelleher, A. Etheridge, A. Véber, N.H. Barton, Theoretical Population Biology 108 (2016) 1–12.
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2016 | Thesis | IST-REx-ID: 1125
Evolutionary proccesses in variable emvironments
S. Novak, Evolutionary Proccesses in Variable Emvironments, IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1158 | OA
Shedding light on the grey zone of speciation along a continuum of genomic divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
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2016 | Journal Article | IST-REx-ID: 1172 | OA
Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae
H. Sachdeva, M. Barma, M. Rao, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1241 | OA
The role of recombination in evolutionary rescue
H. Uecker, J. Hermisson, Genetics 202 (2016) 721–732.
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2016 | Journal Article | IST-REx-ID: 1382 View | Files available | DOI
 
2016 | Research Data | IST-REx-ID: 5550 | OA
Flower colour data and phylogeny (NEXUS) files
T. Ellis, D. Field, Flower Colour Data and Phylogeny (NEXUS) Files, IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1420 | OA
A general approximation for the dynamics of quantitative traits
K. Bod’ová, G. Tkacik, N.H. Barton, Genetics 202 (2016) 1523–1548.
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2016 | Journal Article | IST-REx-ID: 1409 | OA
Genomics of hybridization and its evolutionary consequences
R. Abbott, N.H. Barton, J. Good, Molecular Ecology 25 (2016) 2325–2332.
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2016 | Journal Article | IST-REx-ID: 1518 | OA
Efficient strategies for calculating blockwise likelihoods under the coalescent
K. Lohse, M. Chmelik, S. Martin, N.H. Barton, Genetics 202 (2016) 775–786.
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2016 | Thesis | IST-REx-ID: 1131
Evolution of transcriptional regulatory sequences
M. Tugrul, Evolution of Transcriptional Regulatory Sequences, IST Austria, 2016.
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2015 | Journal Article | IST-REx-ID: 1699 | OA
Adaptive gene introgression after secondary contact
H. Uecker, D. Setter, J. Hermisson, Journal of Mathematical Biology 70 (2015) 1523–1580.
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2015 | Journal Article | IST-REx-ID: 1703 View | DOI
 
2015 | Journal Article | IST-REx-ID: 1681 | OA
Evolution of decisions in population games with sequentially searching individuals
T. Priklopil, K. Chatterjee, Games 6 (2015) 413–437.
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2015 | Journal Article | IST-REx-ID: 1850 | OA View | Files available | DOI
 
2015 | Journal Article | IST-REx-ID: 1851 | OA View | Files available | DOI
 
2015 | Conference Paper | IST-REx-ID: 1835 | OA
Model checking gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
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