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172 Publications
2017 | Journal Article | IST-REx-ID: 1351 | 
Model checking the evolution of gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.
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M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.
2017 | Journal Article | IST-REx-ID: 1063 |
Evolutionary rescue in randomly mating, selfing, and clonal populations
H. Uecker, Evolution 71 (2017) 845–858.
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H. Uecker, Evolution 71 (2017) 845–858.
2017 | Journal Article | IST-REx-ID: 1074 |
Inferring recent demography from isolation by distance of long shared sequence blocks
H. Ringbauer, G. Coop, N.H. Barton, Genetics 205 (2017) 1335–1351.
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H. Ringbauer, G. Coop, N.H. Barton, Genetics 205 (2017) 1335–1351.
2017 | Journal Article | IST-REx-ID: 1077 |
Evolutionary interplay between structure, energy and epistasis in the coat protein of the fX174 phage family
R.A. Fernandes Redondo, H. Vladar, T. Włodarski, J.P. Bollback, Journal of the Royal Society Interface 14 (2017).
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R.A. Fernandes Redondo, H. Vladar, T. Włodarski, J.P. Bollback, Journal of the Royal Society Interface 14 (2017).
2017 | Journal Article | IST-REx-ID: 1111 |
Selection limits to adaptive walks on correlated landscapes
J. Heredia, B. Trubenova, D. Sudholt, T. Paixao, Genetics 205 (2017) 803–825.
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| PubMed | Europe PMC
J. Heredia, B. Trubenova, D. Sudholt, T. Paixao, Genetics 205 (2017) 803–825.
2017 | Conference Paper | IST-REx-ID: 1112
An application of stochastic differential equations to evolutionary algorithms
T. Paixao, J. Pérez Heredia, in:, Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, ACM, 2017, pp. 3–11.
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T. Paixao, J. Pérez Heredia, in:, Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, ACM, 2017, pp. 3–11.
2017 | Journal Article | IST-REx-ID: 1169 |
Spatial gene frequency waves under genotype dependent dispersal
S. Novak, R. Kollár, Genetics 205 (2017) 367–374.
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S. Novak, R. Kollár, Genetics 205 (2017) 367–374.
2017 | Journal Article | IST-REx-ID: 1191 |
Existence of traveling waves for the generalized F–KPP equation
R. Kollár, S. Novak, Bulletin of Mathematical Biology 79 (2017) 525–559.
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R. Kollár, S. Novak, Bulletin of Mathematical Biology 79 (2017) 525–559.
2017 | Journal Article | IST-REx-ID: 570 |
Regulatory network structure determines patterns of intermolecular epistasis
M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 611
Evolution of flower color pattern through selection on regulatory small RNAs
D. Bradley, P. Xu, I. Mohorianu, A. Whibley, D. Field, H. Tavares, M. Couchman, L. Copsey, R. Carpenter, M. Li, Q. Li, Y. Xue, T. Dalmay, E. Coen, Science 358 (2017) 925–928.
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D. Bradley, P. Xu, I. Mohorianu, A. Whibley, D. Field, H. Tavares, M. Couchman, L. Copsey, R. Carpenter, M. Li, Q. Li, Y. Xue, T. Dalmay, E. Coen, Science 358 (2017) 925–928.
2017 | Journal Article | IST-REx-ID: 614 |
The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W
C. Fraisse, M.A.L. Picard, B. Vicoso, Nature Communications 8 (2017).
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C. Fraisse, M.A.L. Picard, B. Vicoso, Nature Communications 8 (2017).
2017 | Research Data | IST-REx-ID: 7163 |
Supplementary Files for "The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W"
C. Fraisse, Supplementary Files for “The Deep Conservation of the Lepidoptera Z Chromosome Suggests a Non Canonical Origin of the W,” IST Austria, 2017.
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C. Fraisse, Supplementary Files for “The Deep Conservation of the Lepidoptera Z Chromosome Suggests a Non Canonical Origin of the W,” IST Austria, 2017.
2017 | Journal Article | IST-REx-ID: 626 |
The infinitesimal model: Definition derivation and implications
N.H. Barton, A. Etheridge, A. Véber, Theoretical Population Biology 118 (2017) 50–73.
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N.H. Barton, A. Etheridge, A. Véber, Theoretical Population Biology 118 (2017) 50–73.
2017 | Journal Article | IST-REx-ID: 696 |
Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes
M. Lukacisinova, S. Novak, T. Paixao, PLoS Computational Biology 13 (2017).
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M. Lukacisinova, S. Novak, T. Paixao, PLoS Computational Biology 13 (2017).
2017 | Journal Article | IST-REx-ID: 910 |
When does frequency-independent selection maintain genetic variation?
S. Novak, N.H. Barton, Genetics 207 (2017) 653–668.
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S. Novak, N.H. Barton, Genetics 207 (2017) 653–668.
2017 | Journal Article | IST-REx-ID: 955 |
Evolution of new regulatory functions on biophysically realistic fitness landscapes
T. Friedlander, R. Prizak, N.H. Barton, G. Tkačik, Nature Communications 8 (2017).
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T. Friedlander, R. Prizak, N.H. Barton, G. Tkačik, Nature Communications 8 (2017).
2017 | Journal Article | IST-REx-ID: 951 |
Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology 15 (2017).
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T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology 15 (2017).
2017 | Journal Article | IST-REx-ID: 952 |
Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti
M. Turelli, N.H. Barton, Theoretical Population Biology 115 (2017) 45–60.
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| PubMed | Europe PMC
M. Turelli, N.H. Barton, Theoretical Population Biology 115 (2017) 45–60.
2017 | Journal Article | IST-REx-ID: 953 |
The sources of adaptive evolution
D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
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D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
2017 | Journal Article | IST-REx-ID: 954 |
On the mechanistic nature of epistasis in a canonical cis-regulatory element
M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 990 |
Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow
H. Sachdeva, N.H. Barton, Evolution; International Journal of Organic Evolution 71 (2017) 1478–1493.
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H. Sachdeva, N.H. Barton, Evolution; International Journal of Organic Evolution 71 (2017) 1478–1493.
2016 | Research Data | IST-REx-ID: 5551 |
Data on pollinator observations and offpsring phenotypes
T. Ellis, Data on Pollinator Observations and Offpsring Phenotypes, IST Austria, 2016.
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T. Ellis, Data on Pollinator Observations and Offpsring Phenotypes, IST Austria, 2016.
2016 | Research Data | IST-REx-ID: 5552 |
Pollinator visitation data for wild Antirrhinum majus plants, with phenotypic and frequency data.
T. Ellis, Pollinator Visitation Data for Wild Antirrhinum Majus Plants, with Phenotypic and Frequency Data., IST Austria, 2016.
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T. Ellis, Pollinator Visitation Data for Wild Antirrhinum Majus Plants, with Phenotypic and Frequency Data., IST Austria, 2016.
2016 | Research Data | IST-REx-ID: 5553 |
Inference of mating patterns among wild snapdragons in a natural hybrid zone in 2012
D. Field, T. Ellis, Inference of Mating Patterns among Wild Snapdragons in a Natural Hybrid Zone in 2012, IST Austria, 2016.
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D. Field, T. Ellis, Inference of Mating Patterns among Wild Snapdragons in a Natural Hybrid Zone in 2012, IST Austria, 2016.
2016 | Research Data | IST-REx-ID: 5554 |
Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase
M. Tugrul, Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase, IST Austria, 2016.
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M. Tugrul, Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1398 |
The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone
T. Ellis, The Role of Pollinator-Mediated Selection in the Maintenance of a Flower Color Polymorphism in an Antirrhinum Majus Hybrid Zone, IST Austria, 2016.
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T. Ellis, The Role of Pollinator-Mediated Selection in the Maintenance of a Flower Color Polymorphism in an Antirrhinum Majus Hybrid Zone, IST Austria, 2016.
2016 | Journal Article | IST-REx-ID: 1224
The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant
Z. Teitel, M. Pickup, D. Field, S. Barrett, Plant Biology 18 (2016) 98–103.
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Z. Teitel, M. Pickup, D. Field, S. Barrett, Plant Biology 18 (2016) 98–103.
2016 | Journal Article | IST-REx-ID: 1195 |
Reconstruction of haplotype-blocks selected during experimental evolution.
S. Franssen, N.H. Barton, C. Schlötterer, Molecular Biology and Evolution 34 (2016) 174–184.
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S. Franssen, N.H. Barton, C. Schlötterer, Molecular Biology and Evolution 34 (2016) 174–184.
2016 | Journal Article | IST-REx-ID: 1358 |
Intrinsic limits to gene regulation by global crosstalk
T. Friedlander, R. Prizak, C.C. Guet, N.H. Barton, G. Tkačik, Nature Communications 7 (2016).
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T. Friedlander, R. Prizak, C.C. Guet, N.H. Barton, G. Tkačik, Nature Communications 7 (2016).
2016 | Journal Article | IST-REx-ID: 1359 |
The effect of gene interactions on the long-term response to selection
T. Paixao, N.H. Barton, PNAS 113 (2016) 4422–4427.
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T. Paixao, N.H. Barton, PNAS 113 (2016) 4422–4427.
2016 | Conference Paper | IST-REx-ID: 1349 |
When non-elitism outperforms elitism for crossing fitness valleys
P. Oliveto, T. Paixao, J. Heredia, D. Sudholt, B. Trubenova, in:, Proceedings of the Genetic and Evolutionary Computation Conference 2016 , ACM, 2016, pp. 1163–1170.
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P. Oliveto, T. Paixao, J. Heredia, D. Sudholt, B. Trubenova, in:, Proceedings of the Genetic and Evolutionary Computation Conference 2016 , ACM, 2016, pp. 1163–1170.
2016 | Journal Article | IST-REx-ID: 1356 |
Sewall Wright on evolution in Mendelian populations and the “Shifting Balance”
N.H. Barton, Genetics 202 (2016) 3–4.
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N.H. Barton, Genetics 202 (2016) 3–4.
2016 | Journal Article | IST-REx-ID: 1357 |
Richard Hudson and Norman Kaplan on the coalescent process
N.H. Barton, Genetics 202 (2016) 865–866.
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N.H. Barton, Genetics 202 (2016) 865–866.
2016 | Journal Article | IST-REx-ID: 1631 |
Spread of pedigree versus genetic ancestry in spatially distributed populations
J. Kelleher, A. Etheridge, A. Véber, N.H. Barton, Theoretical Population Biology 108 (2016) 1–12.
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J. Kelleher, A. Etheridge, A. Véber, N.H. Barton, Theoretical Population Biology 108 (2016) 1–12.
2016 | Thesis | IST-REx-ID: 1125
Evolutionary proccesses in variable emvironments
S. Novak, Evolutionary Proccesses in Variable Emvironments, IST Austria, 2016.
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S. Novak, Evolutionary Proccesses in Variable Emvironments, IST Austria, 2016.
2016 | Journal Article | IST-REx-ID: 1158 |
Shedding light on the grey zone of speciation along a continuum of genomic divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
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C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
2016 | Journal Article | IST-REx-ID: 1172 |
Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae
H. Sachdeva, M. Barma, M. Rao, Scientific Reports 6 (2016).
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H. Sachdeva, M. Barma, M. Rao, Scientific Reports 6 (2016).
2016 | Journal Article | IST-REx-ID: 1241 |
The role of recombination in evolutionary rescue
H. Uecker, J. Hermisson, Genetics 202 (2016) 721–732.
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H. Uecker, J. Hermisson, Genetics 202 (2016) 721–732.
2016 | Journal Article | IST-REx-ID: 1382
Repeated gains in yellow and anthocyanin pigmentation in flower colour transitions in the Antirrhineae
T. Ellis, D. Field, Annals of Botany 117 (2016) 1133–1140.
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T. Ellis, D. Field, Annals of Botany 117 (2016) 1133–1140.
2016 | Research Data | IST-REx-ID: 5550 |
Flower colour data and phylogeny (NEXUS) files
T. Ellis, D. Field, Flower Colour Data and Phylogeny (NEXUS) Files, IST Austria, 2016.
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T. Ellis, D. Field, Flower Colour Data and Phylogeny (NEXUS) Files, IST Austria, 2016.
2016 | Journal Article | IST-REx-ID: 1420 |
A general approximation for the dynamics of quantitative traits
K. Bod’ová, G. Tkacik, N.H. Barton, Genetics 202 (2016) 1523–1548.
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K. Bod’ová, G. Tkacik, N.H. Barton, Genetics 202 (2016) 1523–1548.
2016 | Journal Article | IST-REx-ID: 1409 |
Genomics of hybridization and its evolutionary consequences
R. Abbott, N.H. Barton, J. Good, Molecular Ecology 25 (2016) 2325–2332.
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R. Abbott, N.H. Barton, J. Good, Molecular Ecology 25 (2016) 2325–2332.
2016 | Journal Article | IST-REx-ID: 1518 |
Efficient strategies for calculating blockwise likelihoods under the coalescent
K. Lohse, M. Chmelik, S. Martin, N.H. Barton, Genetics 202 (2016) 775–786.
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K. Lohse, M. Chmelik, S. Martin, N.H. Barton, Genetics 202 (2016) 775–786.
2016 | Thesis | IST-REx-ID: 1131
Evolution of transcriptional regulatory sequences
M. Tugrul, Evolution of Transcriptional Regulatory Sequences, IST Austria, 2016.
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M. Tugrul, Evolution of Transcriptional Regulatory Sequences, IST Austria, 2016.
2015 | Journal Article | IST-REx-ID: 1699 |
Adaptive gene introgression after secondary contact
H. Uecker, D. Setter, J. Hermisson, Journal of Mathematical Biology 70 (2015) 1523–1580.
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H. Uecker, D. Setter, J. Hermisson, Journal of Mathematical Biology 70 (2015) 1523–1580.
2015 | Journal Article | IST-REx-ID: 1703
An evaluation of the genetic structure of seed sources and the maintenance of genetic diversity during establishment of two yellow box (Eucalyptus melliodora) seed-production areas
L. Broadhurst, G. Fifield, B. Vanzella, M. Pickup, Australian Journal of Botany 63 (2015) 455–466.
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L. Broadhurst, G. Fifield, B. Vanzella, M. Pickup, Australian Journal of Botany 63 (2015) 455–466.
2015 | Journal Article | IST-REx-ID: 1681 |
Evolution of decisions in population games with sequentially searching individuals
T. Priklopil, K. Chatterjee, Games 6 (2015) 413–437.
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T. Priklopil, K. Chatterjee, Games 6 (2015) 413–437.
2015 | Journal Article | IST-REx-ID: 1850 |
Fungal disease dynamics in insect societies: Optimal killing rates and the ambivalent effect of high social interaction rates
S. Novak, S. Cremer, Journal of Theoretical Biology 372 (2015) 54–64.
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S. Novak, S. Cremer, Journal of Theoretical Biology 372 (2015) 54–64.
2015 | Journal Article | IST-REx-ID: 1851 |
Evolutionarily stable mating decisions for sequentially searching females and the stability of reproductive isolation by assortative mating
T. Priklopil, E. Kisdi, M. Gyllenberg, Evolution 69 (2015) 1015–1026.
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T. Priklopil, E. Kisdi, M. Gyllenberg, Evolution 69 (2015) 1015–1026.
2015 | Conference Paper | IST-REx-ID: 1835 |
Model checking gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
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M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.