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168 Publications

2018 | Thesis | IST-REx-ID: 200
Ringbauer, Harald. Inferring Recent Demography from Spatial Genetic Structure. IST Austria, 2018. https://doi.org/10.15479/AT:ISTA:th_963.
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2018 | Journal Article | IST-REx-ID: 565   OA
Charlesworth, Brian, and Nicholas H Barton. “The Spread of an Inversion with Migration and Selection.” Genetics 208, no. 1 (2018): 377–82. https://doi.org/10.1534/genetics.117.300426.
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2017 | Journal Article | IST-REx-ID: 1111   OA
Heredia, Jorge, Barbora Trubenova, Dirk Sudholt, and Tiago Paixao. “Selection Limits to Adaptive Walks on Correlated Landscapes.” Genetics 205, no. 2 (2017): 803–25. https://doi.org/10.1534/genetics.116.189340.
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2017 | Journal Article | IST-REx-ID: 1077   OA
Fernandes Redondo, Rodrigo A, Harold Vladar, Tomasz Włodarski, and Jonathan P Bollback. “Evolutionary Interplay between Structure, Energy and Epistasis in the Coat Protein of the FX174 Phage Family.” Journal of the Royal Society Interface 14, no. 126 (2017). https://doi.org/10.1098/rsif.2016.0139.
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2017 | Journal Article | IST-REx-ID: 910   OA
Novak, Sebastian, and Nicholas H Barton. “When Does Frequency-Independent Selection Maintain Genetic Variation?” Genetics 207, no. 2 (2017): 653–68. https://doi.org/10.1534/genetics.117.300129.
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2017 | Journal Article | IST-REx-ID: 953   OA
Charlesworth, Deborah, Nicholas H Barton, and Brian Charlesworth. “The Sources of Adaptive Evolution.” Proceedings of the Royal Society of London Series B Biological Sciences 284, no. 1855 (2017). https://doi.org/10.1098/rspb.2016.2864.
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2017 | Journal Article | IST-REx-ID: 1351
Giacobbe, Mirco, Calin C Guet, Ashutosh Gupta, Thomas A Henzinger, Tiago Paixao, and Tatjana Petrov. “Model Checking the Evolution of Gene Regulatory Networks.” Acta Informatica 54, no. 8 (2017): 765–87. https://doi.org/10.1007/s00236-016-0278-x.
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2017 | Conference Paper | IST-REx-ID: 1112
Paixao, Tiago, and Jorge Pérez Heredia. “An Application of Stochastic Differential Equations to Evolutionary Algorithms.” In Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, 3–11. ACM, 2017. https://doi.org/10.1145/3040718.3040729.
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2017 | Journal Article | IST-REx-ID: 954   OA
Lagator, Mato, Tiago Paixao, Nicholas H Barton, Jonathan P Bollback, and Calin C Guet. “On the Mechanistic Nature of Epistasis in a Canonical Cis-Regulatory Element.” ELife 6 (2017). https://doi.org/10.7554/eLife.25192.
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2017 | Journal Article | IST-REx-ID: 1199   OA
Barton, Nicholas H. “How Does Epistasis Influence the Response to Selection?” Heredity 118 (2017): 96–109. https://doi.org/10.1038/hdy.2016.109.
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2017 | Journal Article | IST-REx-ID: 1074
Ringbauer, Harald, Graham Coop, and Nicholas H Barton. “Inferring Recent Demography from Isolation by Distance of Long Shared Sequence Blocks.” Genetics 205, no. 3 (2017): 1335–51. https://doi.org/10.1534/genetics.116.196220.
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2017 | Journal Article | IST-REx-ID: 570   OA
Lagator, Mato, Srdjan Sarikas, Hande Acar, Jonathan P Bollback, and Calin C Guet. “Regulatory Network Structure Determines Patterns of Intermolecular Epistasis.” ELife 6 (2017). https://doi.org/10.7554/eLife.28921.
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2017 | Journal Article | IST-REx-ID: 626   OA
Barton, Nicholas H, Alison Etheridge, and Amandine Véber. “The Infinitesimal Model: Definition Derivation and Implications.” Theoretical Population Biology 118 (2017): 50–73. https://doi.org/10.1016/j.tpb.2017.06.001.
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2017 | Journal Article | IST-REx-ID: 955   OA
Friedlander, Tamar, Roshan Prizak, Nicholas H Barton, and Gasper Tkacik. “Evolution of New Regulatory Functions on Biophysically Realistic Fitness Landscapes.” Nature Communications 8, no. 1 (2017). https://doi.org/10.1038/s41467-017-00238-8.
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2017 | Journal Article | IST-REx-ID: 614   OA
Fraisse, Christelle, Marion A Picard, and Beatriz Vicoso. “The Deep Conservation of the Lepidoptera Z Chromosome Suggests a Non Canonical Origin of the W.” Nature Communications 8, no. 1 (2017): 1486. https://doi.org/10.1038/s41467-017-01663-5.
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2017 | Journal Article | IST-REx-ID: 1063   OA
Uecker, Hildegard. “Evolutionary Rescue in Randomly Mating, Selfing, and Clonal Populations.” Evolution 71, no. 4 (2017): 845–58. https://doi.org/10.1111/evo.13191.
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2017 | Journal Article | IST-REx-ID: 1169   OA
Novak, Sebastian, and Richard Kollár. “Spatial Gene Frequency Waves under Genotype Dependent Dispersal.” Genetics 205, no. 1 (2017): 367–74. https://doi.org/10.1534/genetics.116.193946.
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2017 | Thesis | IST-REx-ID: 6291
Payne, Pavel. Bacterial Herd and Social Immunity to Phages. IST Austria, 2017.
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2017 | Journal Article | IST-REx-ID: 951   OA
Schmidt, Tom, Nicholas H Barton, Gordana Rasic, Andrew Turley, Brian Montgomery, Inaki Iturbe Ormaetxe, Peter Cook, et al. “Local Introduction and Heterogeneous Spatial Spread of Dengue-Suppressing Wolbachia through an Urban Population of Aedes Aegypti.” PLoS Biology 15, no. 5 (2017). https://doi.org/10.1371/journal.pbio.2001894.
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2017 | Journal Article | IST-REx-ID: 696
Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Stress Induced Mutagenesis: Stress Diversity Facilitates the Persistence of Mutator Genes.” PLoS Computational Biology 13, no. 7 (2017). https://doi.org/10.1371/journal.pcbi.1005609.
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2017 | Journal Article | IST-REx-ID: 1191   OA
Kollár, Richard, and Sebastian Novak. “Existence of Traveling Waves for the Generalized F–KPP Equation.” Bulletin of Mathematical Biology 79, no. 3 (2017): 525–59. https://doi.org/10.1007/s11538-016-0244-3.
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2017 | Journal Article | IST-REx-ID: 1336   OA
Paixao, Tiago, Jorge Pérez Heredia, Dirk Sudholt, and Barbora Trubenova. “Towards a Runtime Comparison of Natural and Artificial Evolution.” Algorithmica 78, no. 2 (2017): 681–713. https://doi.org/10.1007/s00453-016-0212-1.
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2017 | Journal Article | IST-REx-ID: 611
Bradley, Desmond, Ping Xu, Irina Mohorianu, Annabel Whibley, David Field, Hugo Tavares, Matthew Couchman, et al. “Evolution of Flower Color Pattern through Selection on Regulatory Small RNAs.” Science 358, no. 6365 (2017): 925–28. https://doi.org/10.1126/science.aao3526.
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2017 | Journal Article | IST-REx-ID: 990   OA
Sachdeva, Himani, and Nicholas H Barton. “Divergence and Evolution of Assortative Mating in a Polygenic Trait Model of Speciation with Gene Flow.” Evolution; International Journal of Organic Evolution 71, no. 6 (2017): 1478–93. https://doi.org/10.1111/evo.13252.
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2017 | Journal Article | IST-REx-ID: 952   OA
Turelli, Michael, and Nicholas H Barton. “Deploying Dengue-Suppressing Wolbachia: Robust Models Predict Slow but Effective Spatial Spread in Aedes Aegypti.” Theoretical Population Biology 115 (2017): 45–60. https://doi.org/10.1016/j.tpb.2017.03.003.
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2017 | Research Data | IST-REx-ID: 7163
Fraisse, Christelle. Supplementary Files for “The Deep Conservation of the Lepidoptera Z Chromosome Suggests a Non Canonical Origin of the W.” IST Austria, 2017. https://doi.org/10.15479/AT:ISTA:7163.
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2016 | Journal Article | IST-REx-ID: 1224
Teitel, Zachary, Melinda Pickup, David Field, and Spencer Barrett. “The Dynamics of Resource Allocation and Costs of Reproduction in a Sexually Dimorphic, Wind-Pollinated Dioecious Plant.” Plant Biology 18, no. 1 (2016): 98–103. https://doi.org/10.1111/plb.12336.
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2016 | Journal Article | IST-REx-ID: 1356   OA
Barton, Nicholas H. “Sewall Wright on Evolution in Mendelian Populations and the ‘Shifting Balance.’” Genetics 202, no. 1 (2016): 3–4. https://doi.org/10.1534/genetics.115.184796.
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2016 | Conference Paper | IST-REx-ID: 1349   OA
Oliveto, Pietro, Tiago Paixao, Jorge Heredia, Dirk Sudholt, and Barbora Trubenova. “When Non-Elitism Outperforms Elitism for Crossing Fitness Valleys.” In Proceedings of the Genetic and Evolutionary Computation Conference 2016 , 1163–70. ACM, 2016. https://doi.org/10.1145/2908812.2908909.
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2016 | Journal Article | IST-REx-ID: 1382
Ellis, Thomas, and David Field. “Repeated Gains in Yellow and Anthocyanin Pigmentation in Flower Colour Transitions in the Antirrhineae.” Annals of Botany 117, no. 7 (2016): 1133–40. https://doi.org/10.1093/aob/mcw043.
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2016 | Research Data | IST-REx-ID: 5550   OA
Ellis, Thomas, and David Field. Flower Colour Data and Phylogeny (NEXUS) Files. IST Austria, 2016. https://doi.org/10.15479/AT:ISTA:34.
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2016 | Journal Article | IST-REx-ID: 1357   OA
Barton, Nicholas H. “Richard Hudson and Norman Kaplan on the Coalescent Process.” Genetics 202, no. 3 (2016): 865–66. https://doi.org/10.1534/genetics.116.187542.
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2016 | Journal Article | IST-REx-ID: 1631   OA
Kelleher, Jerome, Alison Etheridge, Amandine Véber, and Nicholas H Barton. “Spread of Pedigree versus Genetic Ancestry in Spatially Distributed Populations.” Theoretical Population Biology 108 (2016): 1–12. https://doi.org/10.1016/j.tpb.2015.10.008.
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2016 | Research Data | IST-REx-ID: 5551   OA
Ellis, Thomas. Data on Pollinator Observations and Offpsring Phenotypes. IST Austria, 2016. https://doi.org/10.15479/AT:ISTA:35.
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2016 | Thesis | IST-REx-ID: 1131
Tugrul, Murat. Evolution of Transcriptional Regulatory Sequences. IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1409   OA
Abbott, Richard, Nicholas H Barton, and Jeffrey Good. “Genomics of Hybridization and Its Evolutionary Consequences.” Molecular Ecology 25, no. 11 (2016): 2325–32. https://doi.org/10.1111/mec.13685.
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2016 | Thesis | IST-REx-ID: 1125
Novak, Sebastian. Evolutionary Proccesses in Variable Emvironments. IST Austria, 2016.
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2016 | Research Data | IST-REx-ID: 5552   OA
Ellis, Thomas. Pollinator Visitation Data for Wild Antirrhinum Majus Plants, with Phenotypic and Frequency Data. IST Austria, 2016. https://doi.org/10.15479/AT:ISTA:36.
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2016 | Journal Article | IST-REx-ID: 1358
Friedlander, Tamar, Roshan Prizak, Calin C Guet, Nicholas H Barton, and Gasper Tkacik. “Intrinsic Limits to Gene Regulation by Global Crosstalk.” Nature Communications 7 (2016). https://doi.org/10.1038/ncomms12307.
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2016 | Journal Article | IST-REx-ID: 1195   OA
Franssen, Susan, Nicholas H Barton, and Christian Schlötterer. “Reconstruction of Haplotype-Blocks Selected during Experimental Evolution.” Molecular Biology and Evolution 34, no. 1 (2016): 174–84. https://doi.org/10.1093/molbev/msw210.
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2016 | Journal Article | IST-REx-ID: 1241   OA
Uecker, Hildegard, and Joachim Hermisson. “The Role of Recombination in Evolutionary Rescue.” Genetics 202, no. 2 (2016): 721–32. https://doi.org/10.1534/genetics.115.180299.
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2016 | Journal Article | IST-REx-ID: 1359   OA
Paixao, Tiago, and Nicholas H Barton. “The Effect of Gene Interactions on the Long-Term Response to Selection.” PNAS 113, no. 16 (2016): 4422–27. https://doi.org/10.1073/pnas.1518830113.
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2016 | Journal Article | IST-REx-ID: 1518   OA
Lohse, Konrad, Martin Chmelik, Simon Martin, and Nicholas H Barton. “Efficient Strategies for Calculating Blockwise Likelihoods under the Coalescent.” Genetics 202, no. 2 (2016): 775–86. https://doi.org/10.1534/genetics.115.183814.
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2016 | Research Data | IST-REx-ID: 5553   OA
Field, David, and Thomas Ellis. Inference of Mating Patterns among Wild Snapdragons in a Natural Hybrid Zone in 2012. IST Austria, 2016. https://doi.org/10.15479/AT:ISTA:37.
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2016 | Journal Article | IST-REx-ID: 1158   OA
Roux, Camille, Christelle Fraisse, Jonathan Romiguier, Youann Anciaux, Nicolas Galtier, and Nicolas Bierne. “Shedding Light on the Grey Zone of Speciation along a Continuum of Genomic Divergence.” PLoS Biology 14, no. 12 (2016). https://doi.org/10.1371/journal.pbio.2000234.
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2016 | Journal Article | IST-REx-ID: 1172   OA
Sachdeva, Himani, Mustansir Barma, and Madan Rao. “Nonequilibrium Description of de Novo Biogenesis and Transport through Golgi-like Cisternae.” Scientific Reports 6 (2016). https://doi.org/10.1038/srep38840.
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2016 | Journal Article | IST-REx-ID: 1420   OA
Bod’ová, Katarína, Gasper Tkacik, and Nicholas H Barton. “A General Approximation for the Dynamics of Quantitative Traits.” Genetics 202, no. 4 (2016): 1523–48. https://doi.org/10.1534/genetics.115.184127.
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2016 | Thesis | IST-REx-ID: 1398
Ellis, Thomas. The Role of Pollinator-Mediated Selection in the Maintenance of a Flower Color Polymorphism in an Antirrhinum Majus Hybrid Zone. IST Austria, 2016. https://doi.org/10.15479/AT:ISTA:TH_526 .
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2016 | Research Data | IST-REx-ID: 5554   OA
Tugrul, Murat. Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase. IST Austria, 2016. https://doi.org/10.15479/AT:ISTA:43.
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2015 | Journal Article | IST-REx-ID: 1666   OA
Tugrul, Murat, Tiago Paixao, Nicholas H Barton, and Gasper Tkacik. “Dynamics of Transcription Factor Binding Site Evolution.” PLoS Genetics 11, no. 11 (2015). https://doi.org/10.1371/journal.pgen.1005639.
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