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Stefanie Belohlavy

Carina Baskett

Parvathy Surendranadh

Lenka Matejovicova

Daria Shipilina

Gemma Puixeu Sala

Louise Arathoon

Anja Westram

Michal Hledik

Oluwafunmilola Olusanya

Himani Sachdeva

Eniko Szep

Christelle Fraisse

Nicholas Barton

Barbora Trubenova

Cereghetti, Eva

Daniel Weissman

Simon Aeschbacher

Harold Vladar

Ferran Palero

Tadeas Priklopil

Roshan Prizak

Harald Ringbauer

Tom Ellis

Maria Melo Hurtado

Hildegard Uecker

Jitka Polechova

David Field

Katarina Bodova

Sebastian Novak

Srdjan Sarikas

Murat Tugrul

Pavel Payne

Melinda Pickup

Tiago Paixao



165 Publications

2019 | Journal Article | IST-REx-ID: 5911
Evolving inversions
R. Faria, K. Johannesson, R.K. Butlin, A.M. Westram, Trends in Ecology and Evolution (2019).
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2019 | Journal Article | IST-REx-ID: 6022   OA
Genetic dissection of assortative mating behavior
R.M. Merrill, P. Rastas, S.H. Martin, M.C. Melo Hurtado, S. Barker, J. Davey, W.O. Mcmillan, C.D. Jiggins, PLoS Biology 17 (2019) e2005902.
View | Files available | DOI
 
2019 | Journal Article | IST-REx-ID: 6089   OA
Pleiotropy modulates the efficacy of selection in drosophila melanogaster
C. Fraisse, G. Puixeu Sala, B. Vicoso, Molecular Biology and Evolution 36 (2019) 500–515.
View | Files available | DOI | Download (ext.) | PubMed | Europe PMC
 
2019 | Journal Article | IST-REx-ID: 6680   OA
Effect of partial selfing and polygenic selection on establishment in a new habitat
H. Sachdeva, Evolution 73 (2019) 1729–1745.
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2019 | Journal Article | IST-REx-ID: 6856   OA
Mating system variation in hybrid zones: Facilitation, barriers and asymmetries to gene flow
M. Pickup, N.H. Barton, Y. Brandvain, C. Fraisse, S. Yakimowski, T. Dixit, C. Lexer, E. Cereghetti, D. Field, New Phytologist 224 (2019) 1035–1047.
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2019 | Journal Article | IST-REx-ID: 6713   OA
An integrative genomic analysis of the Longshanks selection experiment for longer limbs in mice
J.P. Castro, M.N. Yancoskie, M. Marchini, S. Belohlavy, L. Hiramatsu, M. Kučka, W.H. Beluch, R. Naumann, I. Skuplik, J. Cobb, N.H. Barton, C. Rolian, Y.F. Chan, ELife 8 (2019) e42014.
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2019 | Journal Article | IST-REx-ID: 6857   OA
Gene Drives: Dynamics and regulatory matters – A report from the workshop “Evaluation of spatial and temporal control of Gene Drives”, 4 – 5 April 2019, Vienna
B. Giese, J.L. Friess, M.F. Schetelig, N.H. Barton, P. Messer, F. Debarre, H. Meimberg, N. Windbichler, C. Boete, BioEssays (2019) 1900151.
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2019 | Journal Article | IST-REx-ID: 6466   OA
Breaking down barriers in morning glories
D. Field, C. Fraisse, Molecular Ecology 28 (2019) 1579–1581.
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2019 | Journal Article | IST-REx-ID: 6637   OA
Surfing on the seascape: Adaptation in a changing environment
B. Trubenova, M. Krejca, P.K. Lehre, T. Kötzing, Evolution 73 (2019) 1356–1374.
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2019 | Journal Article | IST-REx-ID: 6795   OA
Green beards in the light of indirect genetic effects
B. Trubenova, R. Hager, Ecology and Evolution (2019).
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2019 | Journal Article | IST-REx-ID: 6858
Is speciation driven by cycles of mixing and isolation?
N.H. Barton, National Science Review 6 (2019) 291–292.
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2019 | Journal Article | IST-REx-ID: 5680
Prevalence of legitimate pollinators and nectar robbers and the consequences for fruit set in an Antirrhinum majus hybrid zone
C. Andalo, M. Burrus, S. Paute, C. Lauzeral, D. Field, Botany Letters 166 (2019) 80–92.
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2019 | Journal Article | IST-REx-ID: 6467
The distribution of epistasis on simple fitness landscapes
C. Fraisse, J.J. Welch, Biology Letters 15 (2019).
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2019 | Journal Article | IST-REx-ID: 6090   OA
Receptor crosstalk improves concentration sensing of multiple ligands
M. Carballo-Pacheco, J. Desponds, T. Gavrilchenko, A. Mayer, R. Prizak, G. Reddy, I. Nemenman, T. Mora, Physical Review E 99 (2019) 022423.
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2019 | Journal Article | IST-REx-ID: 6095   OA
Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes
R. Faria, P. Chaube, H.E. Morales, T. Larsson, A.R. Lemmon, E.M. Lemmon, M. Rafajlović, M. Panova, M. Ravinet, K. Johannesson, A.M. Westram, R.K. Butlin, Molecular Ecology (2019).
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2019 | Journal Article | IST-REx-ID: 6230   OA
Why structure matters
N.H. Barton, J. Hermisson, M. Nordborg, ELife 8 (2019) e45380.
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2019 | Journal Article | IST-REx-ID: 6831   OA
Variation in sexual dimorphism in a wind-pollinated plant: The influence of geographical context and life-cycle dynamics
G. Puixeu Sala, M. Pickup, D. Field, S.C.H. Barrett, New Phytologist (2019).
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2019 | Journal Article | IST-REx-ID: 6855   OA
Thinking about the evolution of complex traits in the era of genome-wide association studies
G. Sella, N.H. Barton, Annual Review of Genomics and Human Genetics 20 (2019) 461–493.
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2019 | Thesis | IST-REx-ID: 6071
Coevolution of transcription factors and their binding sites in sequence space
R. Prizak, Coevolution of Transcription Factors and Their Binding Sites in Sequence Space, IST Austria, 2019.
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2018 | Journal Article | IST-REx-ID: 282   OA
Introgression of a block of genome under infinitesimal selection
H. Sachdeva, N.H. Barton, Genetics 209 (2018) 1279–1303.
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2018 | Research Data | IST-REx-ID: 5757
Supplementary Files for "Pleiotropy modulates the efficacy of selection in Drosophila melanogaster"
C. Fraisse, Supplementary Files for “Pleiotropy Modulates the Efficacy of Selection in Drosophila Melanogaster,” IST Austria, 2018.
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2018 | Journal Article | IST-REx-ID: 315   OA
Is the sky the limit? On the expansion threshold of a species’ range
J. Polechova, PLoS Biology 16 (2018).
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2018 | Journal Article | IST-REx-ID: 396
Inference from paternity and sibships accounting for uncertainty in genealogy
T. Ellis, D. Field, N.H. Barton, Molecular Ecology Resources 18 (2018) 988–999.
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2018 | Journal Article | IST-REx-ID: 430   OA
Tread lightly interpreting polygenic tests of selection
J. Novembre, N.H. Barton, Genetics 208 (2018) 1351–1355.
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2018 | Journal Article | IST-REx-ID: 423   OA
CRISPR-based herd immunity can limit phage epidemics in bacterial populations
P. Payne, L. Geyrhofer, N.H. Barton, J.P. Bollback, ELife 7 (2018).
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2018 | Journal Article | IST-REx-ID: 316   OA
Evolutionary pathways for the generation of new self-incompatibility haplotypes in a non-self recognition system
K. Bodova, T. Priklopil, D. Field, N.H. Barton, M. Pickup, Genetics 209 (2018) 861–883.
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2018 | Journal Article | IST-REx-ID: 563   OA
Estimating barriers to gene flow from distorted isolation-by-distance patterns
H. Ringbauer, A. Kolesnikov, D. Field, N.H. Barton, Genetics 208 (2018) 1231–1245.
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2018 | Research Data | IST-REx-ID: 5583   OA
Data and Python scripts supporting Python package FAPS
T. Ellis, Data and Python Scripts Supporting Python Package FAPS, IST Austria, 2018.
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2018 | Journal Article | IST-REx-ID: 607   OA
Well posedness and maximum entropy approximation for the dynamics of quantitative traits
K. Bodova, J. Haskovec, P. Markowich, Physica D: Nonlinear Phenomena 376–377 (2018) 108–120.
View | DOI | Download (ext.) | arXiv
 
2018 | Journal Article | IST-REx-ID: 139   OA
The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: The effects of sequencing techniques and sampling strategies
C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
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2018 | Journal Article | IST-REx-ID: 33   OA
Can secondary contact following range expansion be distinguished from barriers to gene flow?
J. Bertl, H. Ringbauer, M. Blum, PeerJ 2018 (2018).
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2018 | Journal Article | IST-REx-ID: 38   OA
Selection and gene flow shape genomic islands that control floral guides
H. Tavares, A. Whitley, D. Field, D. Bradley, M. Couchman, L. Copsey, J. Elleouet, M. Burrus, C. Andalo, M. Li, Q. Li, Y. Xue, A.B. Rebocho, N.H. Barton, E. Coen, PNAS 115 (2018) 11006–11011.
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2018 | Journal Article | IST-REx-ID: 40   OA
The consequences of an introgression event
N.H. Barton, Molecular Ecology 27 (2018) 4973–4975.
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2018 | Journal Article | IST-REx-ID: 564
Establishment in a new habitat by polygenic adaptation
N.H. Barton, A. Etheridge, Theoretical Population Biology 122 (2018) 110–127.
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2018 | Journal Article | IST-REx-ID: 723   OA
How to escape local optima in black box optimisation when non elitism outperforms elitism
P. Oliveto, T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 80 (2018) 1604–1633.
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2018 | Journal Article | IST-REx-ID: 39   OA
Replicability of introgression under linked, polygenic selection
H. Sachdeva, N.H. Barton, Genetics 210 (2018) 1411–1427.
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2018 | Journal Article | IST-REx-ID: 286
Efficient inference of paternity and sibship inference given known maternity via hierarchical clustering
T. Ellis, D. Field, N.H. Barton, Molecular Ecology Resources 18 (2018) 988–999.
View | Files available | DOI
 
2018 | Thesis | IST-REx-ID: 200
Inferring recent demography from spatial genetic structure
H. Ringbauer, Inferring Recent Demography from Spatial Genetic Structure, IST Austria, 2018.
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2018 | Journal Article | IST-REx-ID: 565   OA
The spread of an inversion with migration and selection
B. Charlesworth, N.H. Barton, Genetics 208 (2018) 377–382.
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2017 | Journal Article | IST-REx-ID: 1111   OA
Selection limits to adaptive walks on correlated landscapes
J. Heredia, B. Trubenova, D. Sudholt, T. Paixao, Genetics 205 (2017) 803–825.
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2017 | Journal Article | IST-REx-ID: 1351
Model checking the evolution of gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.
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2017 | Journal Article | IST-REx-ID: 910   OA
When does frequency-independent selection maintain genetic variation?
S. Novak, N.H. Barton, Genetics 207 (2017) 653–668.
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2017 | Journal Article | IST-REx-ID: 953   OA
The sources of adaptive evolution
D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
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2017 | Journal Article | IST-REx-ID: 1077   OA
Evolutionary interplay between structure, energy and epistasis in the coat protein of the fX174 phage family
R.A. Fernandes Redondo, H. Vladar, T. Włodarski, J.P. Bollback, Journal of the Royal Society Interface 14 (2017) 20160139.
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2017 | Conference Paper | IST-REx-ID: 1112
An application of stochastic differential equations to evolutionary algorithms
T. Paixao, J. Pérez Heredia, in:, Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, ACM, 2017, pp. 3–11.
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2017 | Journal Article | IST-REx-ID: 954   OA
On the mechanistic nature of epistasis in a canonical cis-regulatory element
M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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2017 | Journal Article | IST-REx-ID: 1199   OA
How does epistasis influence the response to selection?
N.H. Barton, Heredity 118 (2017) 96–109.
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2017 | Journal Article | IST-REx-ID: 1074
Inferring recent demography from isolation by distance of long shared sequence blocks
H. Ringbauer, G. Coop, N.H. Barton, Genetics 205 (2017) 1335–1351.
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2017 | Journal Article | IST-REx-ID: 570   OA
Regulatory network structure determines patterns of intermolecular epistasis
M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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2017 | Journal Article | IST-REx-ID: 626   OA
The infinitesimal model: Definition derivation and implications
N.H. Barton, A. Etheridge, A. Véber, Theoretical Population Biology 118 (2017) 50–73.
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