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173 Publications

2020 | Journal Article | IST-REx-ID: 7236 | OA
Baskett C, Schroeder L, Weber MG, Schemske DW. 2020. Multiple metrics of latitudinal patterns in insect pollination and herbivory for a tropical‐temperate congener pair. Ecological Monographs. 90(1).
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2020 | Journal Article | IST-REx-ID: 7651 | OA
Larsson J, Westram AM, Bengmark S, Lundh T, Butlin RK. 2020. A developmentally descriptive method for quantifying shape in gastropod shells. Journal of The Royal Society Interface. 17(163).
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2020 | Journal Article | IST-REx-ID: 7995 | OA
Perini S, Rafajlović M, Westram AM, Johannesson K, Butlin RK. 2020. Assortative mating, sexual selection, and their consequences for gene flow in Littorina. Evolution.
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2020 | Journal Article | IST-REx-ID: 8112
Barton NH. 2020. On the completion of speciation. Philosophical Transactions of the Royal Society. Series B: Biological Sciences. 375(1806).
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2020 | Journal Article | IST-REx-ID: 8167 | OA
Stankowski S, Westram AM, Zagrodzka ZB, Eyres I, Broquet T, Johannesson K, Butlin RK. 2020. The evolution of strong reproductive isolation between sympatric intertidal snails. Philosophical Transactions of the Royal Society. Series B: Biological Sciences. 375(1806).
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2020 | Journal Article | IST-REx-ID: 8168 | OA
Kulmuni J, Butlin RK, Lucek K, Savolainen V, Westram AM. 2020. Towards the completion of speciation: The evolution of reproductive isolation beyond the first barriers. Philosophical Transactions of the Royal Society. Series B: Biological sciences. 375(1806).
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2020 | Journal Article | IST-REx-ID: 8169 | OA
Shang H, Hess J, Pickup M, Field D, Ingvarsson PK, Liu J, Lexer C. 2020. Evolution of strong reproductive isolation in plants: Broad-scale patterns and lessons from a perennial model group. Philosophical Transactions of the Royal Society. Series B: Biological Sciences. 375(1806).
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2020 | Research Data | IST-REx-ID: 8254 | OA
Arathoon LS. 2020. Estimating inbreeding and its effects in a long-term study of snapdragons (Antirrhinum majus), IST Austria,p.
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2019 | Journal Article | IST-REx-ID: 7205
Johannesson K, Zagrodzka Z, Faria R, Westram AM, Butlin RK. 2019. Is embryo abortion a post-zygotic barrier to gene flow between Littorina ecotypes? Journal of Evolutionary Biology.
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2019 | Journal Article | IST-REx-ID: 7393 | OA
Morales HE, Faria R, Johannesson K, Larsson T, Panova M, Westram AM, Butlin RK. 2019. Genomic architecture of parallel ecological divergence: Beyond a single environmental contrast. Science Advances. 5(12).
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2019 | Journal Article | IST-REx-ID: 5680
Andalo C, Burrus M, Paute S, Lauzeral C, Field D. 2019. Prevalence of legitimate pollinators and nectar robbers and the consequences for fruit set in an Antirrhinum majus hybrid zone. Botany Letters. 166(1), 80–92.
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2019 | Journal Article | IST-REx-ID: 5911 | OA
Faria R, Johannesson K, Butlin RK, Westram AM. 2019. Evolving inversions. Trends in Ecology and Evolution. 34(3), 239–248.
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2019 | Journal Article | IST-REx-ID: 6022 | OA
Merrill RM, Rastas P, Martin SH, Melo Hurtado MC, Barker S, Davey J, Mcmillan WO, Jiggins CD. 2019. Genetic dissection of assortative mating behavior. PLoS Biology. 17(2).
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2019 | Thesis | IST-REx-ID: 6071 | OA
Prizak R. 2019. Coevolution of transcription factors and their binding sites in sequence space, IST Austria, 189p.
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2019 | Journal Article | IST-REx-ID: 6089 | OA
Fraisse C, Puixeu Sala G, Vicoso B. 2019. Pleiotropy modulates the efficacy of selection in drosophila melanogaster. Molecular biology and evolution. 36(3), 500–515.
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2019 | Journal Article | IST-REx-ID: 6090 | OA
Carballo-Pacheco M, Desponds J, Gavrilchenko T, Mayer A, Prizak R, Reddy G, Nemenman I, Mora T. 2019. Receptor crosstalk improves concentration sensing of multiple ligands. Physical Review E. 99(2), 022423.
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2019 | Journal Article | IST-REx-ID: 6095 | OA
Faria R, Chaube P, Morales HE, Larsson T, Lemmon AR, Lemmon EM, Rafajlović M, Panova M, Ravinet M, Johannesson K, Westram AM, Butlin RK. 2019. Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes. Molecular Ecology. 28(6), 1375–1393.
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2019 | Journal Article | IST-REx-ID: 6230 | OA
Barton NH, Hermisson J, Nordborg M. 2019. Why structure matters. eLife. 8.
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2019 | Journal Article | IST-REx-ID: 6466 | OA
Field D, Fraisse C. 2019. Breaking down barriers in morning glories. Molecular ecology. 28(7), 1579–1581.
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2019 | Journal Article | IST-REx-ID: 6467
Fraisse C, Welch JJ. 2019. The distribution of epistasis on simple fitness landscapes. Biology Letters. 15(4), 0881.
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2019 | Journal Article | IST-REx-ID: 6637 | OA
Trubenova B, Krejca M, Lehre PK, Kötzing T. 2019. Surfing on the seascape: Adaptation in a changing environment. Evolution. 73(7), 1356–1374.
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2019 | Journal Article | IST-REx-ID: 6680 | OA
Sachdeva H. 2019. Effect of partial selfing and polygenic selection on establishment in a new habitat. Evolution. 73(9), 1729–1745.
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2019 | Journal Article | IST-REx-ID: 6713 | OA
Castro JP, Yancoskie MN, Marchini M, Belohlavy S, Hiramatsu L, Kučka M, Beluch WH, Naumann R, Skuplik I, Cobb J, Barton NH, Rolian C, Chan YF. 2019. An integrative genomic analysis of the Longshanks selection experiment for longer limbs in mice. eLife. 8.
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2019 | Journal Article | IST-REx-ID: 6795 | OA
Trubenova B, Hager R. 2019. Green beards in the light of indirect genetic effects. Ecology and Evolution. 9(17), 9597–9608.
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2019 | Journal Article | IST-REx-ID: 6831 | OA
Puixeu Sala G, Pickup M, Field D, Barrett SCH. 2019. Variation in sexual dimorphism in a wind-pollinated plant: The influence of geographical context and life-cycle dynamics. New Phytologist. 224(3), 1108–1120.
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2019 | Journal Article | IST-REx-ID: 6855 | OA
Sella G, Barton NH. 2019. Thinking about the evolution of complex traits in the era of genome-wide association studies. Annual Review of Genomics and Human Genetics. 20, 461–493.
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2019 | Journal Article | IST-REx-ID: 6856 | OA
Pickup M, Barton NH, Brandvain Y, Fraisse C, Yakimowski S, Dixit T, Lexer C, Cereghetti E, Field D. 2019. Mating system variation in hybrid zones: Facilitation, barriers and asymmetries to gene flow. New Phytologist. 224(3), 1035–1047.
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2019 | Journal Article | IST-REx-ID: 6857 | OA
Giese B, Friess JL, Schetelig MF, Barton NH, Messer P, Debarre F, Meimberg H, Windbichler N, Boete C. 2019. Gene Drives: Dynamics and regulatory matters – A report from the workshop “Evaluation of spatial and temporal control of Gene Drives”, 4 – 5 April 2019, Vienna. BioEssays. 41(11).
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2019 | Journal Article | IST-REx-ID: 6858
Barton NH. 2019. Is speciation driven by cycles of mixing and isolation? National Science Review. 6(2), 291–292.
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2018 | Thesis | IST-REx-ID: 200 | OA
Ringbauer H. 2018. Inferring recent demography from spatial genetic structure, IST Austria, 146p.
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2018 | Journal Article | IST-REx-ID: 723 | OA
Oliveto P, Paixao T, Pérez Heredia J, Sudholt D, Trubenova B. 2018. How to escape local optima in black box optimisation when non elitism outperforms elitism. Algorithmica. 80(5), 1604–1633.
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2018 | Journal Article | IST-REx-ID: 40 | OA
Barton NH. 2018. The consequences of an introgression event. Molecular Ecology. 27(24), 4973–4975.
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2018 | Journal Article | IST-REx-ID: 423 | OA
Payne P, Geyrhofer L, Barton NH, Bollback JP. 2018. CRISPR-based herd immunity can limit phage epidemics in bacterial populations. eLife. 7.
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2018 | Journal Article | IST-REx-ID: 430 | OA
Novembre J, Barton NH. 2018. Tread lightly interpreting polygenic tests of selection. Genetics. 208(4), 1351–1355.
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2018 | Research Data | IST-REx-ID: 5583 | OA
Ellis T. 2018. Data and Python scripts supporting Python package FAPS, IST Austria,p.
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2018 | Journal Article | IST-REx-ID: 563 | OA
Ringbauer H, Kolesnikov A, Field D, Barton NH. 2018. Estimating barriers to gene flow from distorted isolation-by-distance patterns. Genetics. 208(3), 1231–1245.
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2018 | Journal Article | IST-REx-ID: 564 | OA
Barton NH, Etheridge A. 2018. Establishment in a new habitat by polygenic adaptation. Theoretical Population Biology. 122(7), 110–127.
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2018 | Journal Article | IST-REx-ID: 565 | OA
Charlesworth B, Barton NH. 2018. The spread of an inversion with migration and selection. Genetics. 208(1), 377–382.
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2018 | Research Data | IST-REx-ID: 5757 | OA
Fraisse C. 2018. Supplementary Files for ‘Pleiotropy modulates the efficacy of selection in Drosophila melanogaster’, IST Austria,p.
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2018 | Journal Article | IST-REx-ID: 607 | OA
Bodova K, Haskovec J, Markowich P. 2018. Well posedness and maximum entropy approximation for the dynamics of quantitative traits. Physica D: Nonlinear Phenomena. 376–377, 108–120.
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2018 | Journal Article | IST-REx-ID: 282 | OA
Sachdeva H, Barton NH. 2018. Introgression of a block of genome under infinitesimal selection. Genetics. 209(4), 1279–1303.
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2018 | Journal Article | IST-REx-ID: 286
Ellis T, Field D, Barton NH. 2018. Efficient inference of paternity and sibship inference given known maternity via hierarchical clustering. Molecular Ecology Resources. 18(5), 988–999.
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2018 | Journal Article | IST-REx-ID: 315 | OA
Polechova J. 2018. Is the sky the limit? On the expansion threshold of a species’ range. PLoS Biology. 16(6).
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2018 | Journal Article | IST-REx-ID: 139 | OA
Fraisse C, Roux C, Gagnaire P, Romiguier J, Faivre N, Welch J, Bierne N. 2018. The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: The effects of sequencing techniques and sampling strategies. PeerJ. 2018(7).
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2018 | Journal Article | IST-REx-ID: 316 | OA
Bod’ová K, Priklopil T, Field D, Barton NH, Pickup M. 2018. Evolutionary pathways for the generation of new self-incompatibility haplotypes in a non-self recognition system. Genetics. 209(3), 861–883.
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2018 | Journal Article | IST-REx-ID: 33 | OA
Bertl J, Ringbauer H, Blum M. 2018. Can secondary contact following range expansion be distinguished from barriers to gene flow? PeerJ. 2018(10).
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2018 | Journal Article | IST-REx-ID: 38 | OA
Tavares H, Whitley A, Field D, Bradley D, Couchman M, Copsey L, Elleouet J, Burrus M, Andalo C, Li M, Li Q, Xue Y, Rebocho AB, Barton NH, Coen E. 2018. Selection and gene flow shape genomic islands that control floral guides. PNAS. 115(43), 11006–11011.
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2018 | Journal Article | IST-REx-ID: 39 | OA
Sachdeva H, Barton NH. 2018. Replicability of introgression under linked, polygenic selection. Genetics. 210(4), 1411–1427.
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2017 | Research Data | IST-REx-ID: 7163 | OA
Fraisse C. 2017. Supplementary Files for ‘The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W’, IST Austria,p.
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2017 | Journal Article | IST-REx-ID: 570 | OA
Lagator M, Sarikas S, Acar H, Bollback JP, Guet CC. 2017. Regulatory network structure determines patterns of intermolecular epistasis. eLife. 6.
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2017 | Journal Article | IST-REx-ID: 611
Bradley D, Xu P, Mohorianu I, Whibley A, Field D, Tavares H, Couchman M, Copsey L, Carpenter R, Li M, Li Q, Xue Y, Dalmay T, Coen E. 2017. Evolution of flower color pattern through selection on regulatory small RNAs. Science. 358(6365), 925–928.
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2017 | Journal Article | IST-REx-ID: 614 | OA
Fraisse C, Picard MAL, Vicoso B. 2017. The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W. Nature Communications. 8(1).
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2017 | Journal Article | IST-REx-ID: 626 | OA
Barton NH, Etheridge A, Véber A. 2017. The infinitesimal model: Definition derivation and implications. Theoretical Population Biology. 118, 50–73.
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2017 | Thesis | IST-REx-ID: 6291
Payne P. 2017. Bacterial herd and social immunity to phages, IST Austria, 83p.
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2017 | Journal Article | IST-REx-ID: 696 | OA
Lukacisinova M, Novak S, Paixao T. 2017. Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology. 13(7).
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2017 | Journal Article | IST-REx-ID: 910 | OA
Novak S, Barton NH. 2017. When does frequency-independent selection maintain genetic variation? Genetics. 207(2), 653–668.
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2017 | Journal Article | IST-REx-ID: 951 | OA
Schmidt T, Barton NH, Rasic G, Turley A, Montgomery B, Iturbe Ormaetxe I, Cook P, Ryan P, Ritchie S, Hoffmann A, O’Neill S, Turelli M. 2017. Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti. PLoS Biology. 15(5).
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2017 | Journal Article | IST-REx-ID: 952 | OA
Turelli M, Barton NH. 2017. Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti. Theoretical Population Biology. 115, 45–60.
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2017 | Journal Article | IST-REx-ID: 953 | OA
Charlesworth D, Barton NH, Charlesworth B. 2017. The sources of adaptive evolution. Proceedings of the Royal Society of London Series B Biological Sciences. 284(1855), 20162864.
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2017 | Journal Article | IST-REx-ID: 954 | OA
Lagator M, Paixao T, Barton NH, Bollback JP, Guet CC. 2017. On the mechanistic nature of epistasis in a canonical cis-regulatory element. eLife. 6.
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2017 | Journal Article | IST-REx-ID: 955 | OA
Friedlander T, Prizak R, Barton NH, Tkačik G. 2017. Evolution of new regulatory functions on biophysically realistic fitness landscapes. Nature Communications. 8(1).
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2017 | Journal Article | IST-REx-ID: 990 | OA
Sachdeva H, Barton NH. 2017. Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow. Evolution; International Journal of Organic Evolution. 71(6), 1478–1493.
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2017 | Journal Article | IST-REx-ID: 1191 | OA
Kollár R, Novak S. 2017. Existence of traveling waves for the generalized F–KPP equation. Bulletin of Mathematical Biology. 79(3), 525–559.
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2017 | Journal Article | IST-REx-ID: 1199 | OA
Barton NH. 2017. How does epistasis influence the response to selection? Heredity. 118, 96–109.
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2017 | Journal Article | IST-REx-ID: 1336 | OA
Paixao T, Pérez Heredia J, Sudholt D, Trubenova B. 2017. Towards a runtime comparison of natural and artificial evolution. Algorithmica. 78(2), 681–713.
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2017 | Journal Article | IST-REx-ID: 1351 | OA
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. 2017. Model checking the evolution of gene regulatory networks. Acta Informatica. 54(8), 765–787.
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2017 | Journal Article | IST-REx-ID: 1063 | OA
Uecker H. 2017. Evolutionary rescue in randomly mating, selfing, and clonal populations. Evolution. 71(4), 845–858.
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2017 | Journal Article | IST-REx-ID: 1074 | OA
Ringbauer H, Coop G, Barton NH. 2017. Inferring recent demography from isolation by distance of long shared sequence blocks. Genetics. 205(3), 1335–1351.
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2017 | Journal Article | IST-REx-ID: 1077 | OA
Fernandes Redondo RA, Vladar H, Włodarski T, Bollback JP. 2017. Evolutionary interplay between structure, energy and epistasis in the coat protein of the fX174 phage family. Journal of the Royal Society Interface. 14(126), 20160139.
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2017 | Journal Article | IST-REx-ID: 1111 | OA
Heredia J, Trubenova B, Sudholt D, Paixao T. 2017. Selection limits to adaptive walks on correlated landscapes. Genetics. 205(2), 803–825.
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2017 | Conference Paper | IST-REx-ID: 1112
Paixao T, Pérez Heredia J. 2017. An application of stochastic differential equations to evolutionary algorithms. Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms. FOGA: Foundations of Genetic Algorithms 3–11.
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2017 | Journal Article | IST-REx-ID: 1169 | OA
Novak S, Kollár R. 2017. Spatial gene frequency waves under genotype dependent dispersal. Genetics. 205(1), 367–374.
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2016 | Research Data | IST-REx-ID: 5550 | OA
Ellis T, Field D. 2016. Flower colour data and phylogeny (NEXUS) files, IST Austria,p.
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2016 | Research Data | IST-REx-ID: 5551 | OA
Ellis T. 2016. Data on pollinator observations and offpsring phenotypes, IST Austria,p.
View | Files available | DOI
 
2016 | Research Data | IST-REx-ID: 5552 | OA
Ellis T. 2016. Pollinator visitation data for wild Antirrhinum majus plants, with phenotypic and frequency data., IST Austria,p.
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2016 | Research Data | IST-REx-ID: 5553 | OA
Field D, Ellis T. 2016. Inference of mating patterns among wild snapdragons in a natural hybrid zone in 2012, IST Austria,p.
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2016 | Research Data | IST-REx-ID: 5554 | OA
Tugrul M. 2016. Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase, IST Austria,p.
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2016 | Journal Article | IST-REx-ID: 1631 | OA
Kelleher J, Etheridge A, Véber A, Barton NH. 2016. Spread of pedigree versus genetic ancestry in spatially distributed populations. Theoretical Population Biology. 108, 1–12.
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2016 | Journal Article | IST-REx-ID: 1195 | OA
Franssen S, Barton NH, Schlötterer C. 2016. Reconstruction of haplotype-blocks selected during experimental evolution. Molecular Biology and Evolution. 34(1), 174–184.
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2016 | Journal Article | IST-REx-ID: 1224
Teitel Z, Pickup M, Field D, Barrett S. 2016. The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant. Plant Biology. 18(1), 98–103.
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2016 | Journal Article | IST-REx-ID: 1241 | OA
Uecker H, Hermisson J. 2016. The role of recombination in evolutionary rescue. Genetics. 202(2), 721–732.
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2016 | Conference Paper | IST-REx-ID: 1349 | OA
Oliveto P, Paixao T, Heredia J, Sudholt D, Trubenova B. 2016. When non-elitism outperforms elitism for crossing fitness valleys. Proceedings of the Genetic and Evolutionary Computation Conference 2016 . GECCO: Genetic and evolutionary computation conference 1163–1170.
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2016 | Journal Article | IST-REx-ID: 1356 | OA
Barton NH. 2016. Sewall Wright on evolution in Mendelian populations and the “Shifting Balance”. Genetics. 202(1), 3–4.
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2016 | Journal Article | IST-REx-ID: 1357 | OA
Barton NH. 2016. Richard Hudson and Norman Kaplan on the coalescent process. Genetics. 202(3), 865–866.
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2016 | Journal Article | IST-REx-ID: 1358 | OA
Friedlander T, Prizak R, Guet CC, Barton NH, Tkačik G. 2016. Intrinsic limits to gene regulation by global crosstalk. Nature Communications. 7.
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2016 | Journal Article | IST-REx-ID: 1359 | OA
Paixao T, Barton NH. 2016. The effect of gene interactions on the long-term response to selection. PNAS. 113(16), 4422–4427.
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2016 | Journal Article | IST-REx-ID: 1382
Ellis T, Field D. 2016. Repeated gains in yellow and anthocyanin pigmentation in flower colour transitions in the Antirrhineae. Annals of Botany. 117(7), 1133–1140.
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2016 | Thesis | IST-REx-ID: 1398 | OA
Ellis T. 2016. The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone, IST Austria, 130p.
View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1409 | OA
Abbott R, Barton NH, Good J. 2016. Genomics of hybridization and its evolutionary consequences. Molecular Ecology. 25(11), 2325–2332.
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2016 | Journal Article | IST-REx-ID: 1420 | OA
Bod’ová K, Tkacik G, Barton NH. 2016. A general approximation for the dynamics of quantitative traits. Genetics. 202(4), 1523–1548.
View | DOI | Download Preprint (ext.) | arXiv
 
2016 | Journal Article | IST-REx-ID: 1518 | OA
Lohse K, Chmelik M, Martin S, Barton NH. 2016. Efficient strategies for calculating blockwise likelihoods under the coalescent. Genetics. 202(2), 775–786.
View | Files available | DOI
 
2016 | Thesis | IST-REx-ID: 1125
Novak S. 2016. Evolutionary proccesses in variable emvironments, IST Austria, 124p.
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2016 | Thesis | IST-REx-ID: 1131
Tugrul M. 2016. Evolution of transcriptional regulatory sequences, IST Austria, 89p.
View | Files available
 
2016 | Journal Article | IST-REx-ID: 1158 | OA
Roux C, Fraisse C, Romiguier J, Anciaux Y, Galtier N, Bierne N. 2016. Shedding light on the grey zone of speciation along a continuum of genomic divergence. PLoS Biology. 14(12).
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2016 | Journal Article | IST-REx-ID: 1172 | OA
Sachdeva H, Barma M, Rao M. 2016. Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae. Scientific Reports. 6.
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2015 | Journal Article | IST-REx-ID: 1542 | OA
Paixao T, Badkobeh G, Barton NH, Çörüş D, Dang D, Friedrich T, Lehre P, Sudholt D, Sutton A, Trubenova B. 2015. Toward a unifying framework for evolutionary processes. Journal of Theoretical Biology. 383, 28–43.
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2015 | Journal Article | IST-REx-ID: 1666 | OA
Tugrul M, Paixao T, Barton NH, Tkačik G. 2015. Dynamics of transcription factor binding site evolution. PLoS Genetics. 11(11).
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2015 | Journal Article | IST-REx-ID: 1681 | OA
Priklopil T, Chatterjee K. 2015. Evolution of decisions in population games with sequentially searching individuals. Games. 6(4), 413–437.
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2015 | Journal Article | IST-REx-ID: 1699 | OA
Uecker H, Setter D, Hermisson J. 2015. Adaptive gene introgression after secondary contact. Journal of Mathematical Biology. 70(7), 1523–1580.
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2015 | Journal Article | IST-REx-ID: 1703
Broadhurst L, Fifield G, Vanzella B, Pickup M. 2015. An evaluation of the genetic structure of seed sources and the maintenance of genetic diversity during establishment of two yellow box (Eucalyptus melliodora) seed-production areas. Australian Journal of Botany. 63(5), 455–466.
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