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167 Publications

2019 | Journal Article | IST-REx-ID: 6831   OA
Puixeu Sala G, Pickup M, Field D, Barrett SCH. 2019. Variation in sexual dimorphism in a wind-pollinated plant: The influence of geographical context and life-cycle dynamics. New Phytologist. 224(3), 1108–1120.
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2019 | Journal Article | IST-REx-ID: 6855   OA
Sella G, Barton NH. 2019. Thinking about the evolution of complex traits in the era of genome-wide association studies. Annual Review of Genomics and Human Genetics. 20, 461–493.
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2019 | Thesis | IST-REx-ID: 6071
Prizak R. 2019. Coevolution of transcription factors and their binding sites in sequence space, IST Austria, 189p.
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2018 | Journal Article | IST-REx-ID: 282   OA
Sachdeva H, Barton NH. 2018. Introgression of a block of genome under infinitesimal selection. Genetics. 209(4), 1279–1303.
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2018 | Research Data | IST-REx-ID: 5757
Fraisse C. 2018. Supplementary Files for ‘Pleiotropy modulates the efficacy of selection in Drosophila melanogaster’, IST Austria,p.
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2018 | Journal Article | IST-REx-ID: 315   OA
Polechova J. 2018. Is the sky the limit? On the expansion threshold of a species’ range. PLoS Biology. 16(6), e2005372.
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2018 | Journal Article | IST-REx-ID: 423   OA
Payne P, Geyrhofer L, Barton NH, Bollback JP. 2018. CRISPR-based herd immunity can limit phage epidemics in bacterial populations. eLife. 7, e32035.
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2018 | Journal Article | IST-REx-ID: 430   OA
Novembre J, Barton NH. 2018. Tread lightly interpreting polygenic tests of selection. Genetics. 208(4), 1351–1355.
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2018 | Journal Article | IST-REx-ID: 563   OA
Ringbauer H, Kolesnikov A, Field D, Barton NH. 2018. Estimating barriers to gene flow from distorted isolation-by-distance patterns. Genetics. 208(3), 1231–1245.
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2018 | Journal Article | IST-REx-ID: 607   OA
Bodova K, Haskovec J, Markowich P. 2018. Well posedness and maximum entropy approximation for the dynamics of quantitative traits. Physica D: Nonlinear Phenomena. 376–377, 108–120.
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2018 | Journal Article | IST-REx-ID: 316   OA
Bodova K, Priklopil T, Field D, Barton NH, Pickup M. 2018. Evolutionary pathways for the generation of new self-incompatibility haplotypes in a non-self recognition system. Genetics. 209(3), 861–883.
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2018 | Research Data | IST-REx-ID: 5583   OA
Ellis T. 2018. Data and Python scripts supporting Python package FAPS, IST Austria,p.
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2018 | Journal Article | IST-REx-ID: 139   OA
Fraisse C, Roux C, Gagnaire P, Romiguier J, Faivre N, Welch J, Bierne N. 2018. The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: The effects of sequencing techniques and sampling strategies. PeerJ. 2018(7), 30083438.
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2018 | Journal Article | IST-REx-ID: 33   OA
Bertl J, Ringbauer H, Blum M. 2018. Can secondary contact following range expansion be distinguished from barriers to gene flow? PeerJ. 2018(10), e5325.
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2018 | Journal Article | IST-REx-ID: 38   OA
Tavares H, Whitley A, Field D, Bradley D, Couchman M, Copsey L, Elleouet J, Burrus M, Andalo C, Li M, Li Q, Xue Y, Rebocho AB, Barton NH, Coen E. 2018. Selection and gene flow shape genomic islands that control floral guides. PNAS. 115(43), 11006–11011.
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2018 | Journal Article | IST-REx-ID: 40   OA
Barton NH. 2018. The consequences of an introgression event. Molecular Ecology. 27(24), 4973–4975.
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2018 | Journal Article | IST-REx-ID: 564   OA
Barton NH, Etheridge A. 2018. Establishment in a new habitat by polygenic adaptation. Theoretical Population Biology. 122(7), 110–127.
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2018 | Journal Article | IST-REx-ID: 723   OA
Oliveto P, Paixao T, Pérez Heredia J, Sudholt D, Trubenova B. 2018. How to escape local optima in black box optimisation when non elitism outperforms elitism. Algorithmica. 80(5), 1604–1633.
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2018 | Thesis | IST-REx-ID: 200
Ringbauer H. 2018. Inferring recent demography from spatial genetic structure, IST Austria, 146p.
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2018 | Journal Article | IST-REx-ID: 565   OA
Charlesworth B, Barton NH. 2018. The spread of an inversion with migration and selection. Genetics. 208(1), 377–382.
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2018 | Journal Article | IST-REx-ID: 286
Ellis T, Field D, Barton NH. 2018. Efficient inference of paternity and sibship inference given known maternity via hierarchical clustering. Molecular Ecology Resources. 18(5), 988–999.
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2018 | Journal Article | IST-REx-ID: 39   OA
Sachdeva H, Barton NH. 2018. Replicability of introgression under linked, polygenic selection. Genetics. 210(4), 1411–1427.
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2017 | Journal Article | IST-REx-ID: 1111   OA
Heredia J, Trubenova B, Sudholt D, Paixao T. 2017. Selection limits to adaptive walks on correlated landscapes. Genetics. 205(2), 803–825.
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2017 | Journal Article | IST-REx-ID: 1077   OA
Fernandes Redondo RA, Vladar H, Włodarski T, Bollback JP. 2017. Evolutionary interplay between structure, energy and epistasis in the coat protein of the fX174 phage family. Journal of the Royal Society Interface. 14(126), 20160139.
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2017 | Journal Article | IST-REx-ID: 910   OA
Novak S, Barton NH. 2017. When does frequency-independent selection maintain genetic variation? Genetics. 207(2), 653–668.
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2017 | Journal Article | IST-REx-ID: 953   OA
Charlesworth D, Barton NH, Charlesworth B. 2017. The sources of adaptive evolution. Proceedings of the Royal Society of London Series B Biological Sciences. 284(1855), 20162864.
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2017 | Journal Article | IST-REx-ID: 1351
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. 2017. Model checking the evolution of gene regulatory networks. Acta Informatica. 54(8), 765–787.
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2017 | Conference Paper | IST-REx-ID: 1112
Paixao T, Pérez Heredia J. 2017. An application of stochastic differential equations to evolutionary algorithms. Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms. FOGA: Foundations of Genetic Algorithms 3–11.
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2017 | Journal Article | IST-REx-ID: 954   OA
Lagator M, Paixao T, Barton NH, Bollback JP, Guet CC. 2017. On the mechanistic nature of epistasis in a canonical cis-regulatory element. eLife. 6, e25192.
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2017 | Journal Article | IST-REx-ID: 1199   OA
Barton NH. 2017. How does epistasis influence the response to selection? Heredity. 118, 96–109.
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2017 | Journal Article | IST-REx-ID: 1074
Ringbauer H, Coop G, Barton NH. 2017. Inferring recent demography from isolation by distance of long shared sequence blocks. Genetics. 205(3), 1335–1351.
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2017 | Journal Article | IST-REx-ID: 570   OA
Lagator M, Sarikas S, Acar H, Bollback JP, Guet CC. 2017. Regulatory network structure determines patterns of intermolecular epistasis. eLife. 6, e28921.
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2017 | Journal Article | IST-REx-ID: 626   OA
Barton NH, Etheridge A, Véber A. 2017. The infinitesimal model: Definition derivation and implications. Theoretical Population Biology. 118, 50–73.
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2017 | Journal Article | IST-REx-ID: 955   OA
Friedlander T, Prizak R, Barton NH, Tkacik G. 2017. Evolution of new regulatory functions on biophysically realistic fitness landscapes. Nature Communications. 8(1), 216.
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2017 | Journal Article | IST-REx-ID: 614   OA
Fraisse C, Picard MA, Vicoso B. 2017. The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W. Nature Communications. 8(1), 1486.
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2017 | Journal Article | IST-REx-ID: 1063   OA
Uecker H. 2017. Evolutionary rescue in randomly mating, selfing, and clonal populations. Evolution. 71(4), 845–858.
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2017 | Journal Article | IST-REx-ID: 1169   OA
Novak S, Kollár R. 2017. Spatial gene frequency waves under genotype dependent dispersal. Genetics. 205(1), 367–374.
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2017 | Thesis | IST-REx-ID: 6291
Payne P. 2017. Bacterial herd and social immunity to phages, IST Austria, 83p.
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2017 | Journal Article | IST-REx-ID: 951   OA
Schmidt T, Barton NH, Rasic G, Turley A, Montgomery B, Iturbe Ormaetxe I, Cook P, Ryan P, Ritchie S, Hoffmann A, O’Neill S, Turelli M. 2017. Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti. PLoS Biology. 15(5), e2001894.
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2017 | Journal Article | IST-REx-ID: 696
Lukacisinova M, Novak S, Paixao T. 2017. Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology. 13(7), e1005609.
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2017 | Journal Article | IST-REx-ID: 1191   OA
Kollár R, Novak S. 2017. Existence of traveling waves for the generalized F–KPP equation. Bulletin of Mathematical Biology. 79(3), 525–559.
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2017 | Journal Article | IST-REx-ID: 1336   OA
Paixao T, Pérez Heredia J, Sudholt D, Trubenova B. 2017. Towards a runtime comparison of natural and artificial evolution. Algorithmica. 78(2), 681–713.
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2017 | Journal Article | IST-REx-ID: 611
Bradley D, Xu P, Mohorianu I, Whibley A, Field D, Tavares H, Couchman M, Copsey L, Carpenter R, Li M, Li Q, Xue Y, Dalmay T, Coen E. 2017. Evolution of flower color pattern through selection on regulatory small RNAs. Science. 358(6365), 925–928.
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2017 | Journal Article | IST-REx-ID: 990   OA
Sachdeva H, Barton NH. 2017. Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow. Evolution; International Journal of Organic Evolution. 71(6), 1478–1493.
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2017 | Journal Article | IST-REx-ID: 952   OA
Turelli M, Barton NH. 2017. Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti. Theoretical Population Biology. 115, 45–60.
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2017 | Research Data | IST-REx-ID: 7163
Fraisse C. 2017. Supplementary Files for ‘The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W’, IST Austria,p.
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2016 | Journal Article | IST-REx-ID: 1224
Teitel Z, Pickup M, Field D, Barrett S. 2016. The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant. Plant Biology. 18(1), 98–103.
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2016 | Journal Article | IST-REx-ID: 1356   OA
Barton NH. 2016. Sewall Wright on evolution in Mendelian populations and the “Shifting Balance”. Genetics. 202(1), 3–4.
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2016 | Conference Paper | IST-REx-ID: 1349   OA
Oliveto P, Paixao T, Heredia J, Sudholt D, Trubenova B. 2016. When non-elitism outperforms elitism for crossing fitness valleys. Proceedings of the Genetic and Evolutionary Computation Conference 2016 . GECCO: Genetic and evolutionary computation conference 1163–1170.
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2016 | Journal Article | IST-REx-ID: 1382
Ellis T, Field D. 2016. Repeated gains in yellow and anthocyanin pigmentation in flower colour transitions in the Antirrhineae. Annals of Botany. 117(7), 1133–1140.
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2016 | Research Data | IST-REx-ID: 5550   OA
Ellis T, Field D. 2016. Flower colour data and phylogeny (NEXUS) files, IST Austria,p.
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2016 | Journal Article | IST-REx-ID: 1357   OA
Barton NH. 2016. Richard Hudson and Norman Kaplan on the coalescent process. Genetics. 202(3), 865–866.
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2016 | Journal Article | IST-REx-ID: 1631   OA
Kelleher J, Etheridge A, Véber A, Barton NH. 2016. Spread of pedigree versus genetic ancestry in spatially distributed populations. Theoretical Population Biology. 108, 1–12.
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2016 | Research Data | IST-REx-ID: 5551   OA
Ellis T. 2016. Data on pollinator observations and offpsring phenotypes, IST Austria,p.
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2016 | Thesis | IST-REx-ID: 1131
Tugrul M. 2016. Evolution of transcriptional regulatory sequences, IST Austria, 89p.
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2016 | Journal Article | IST-REx-ID: 1409   OA
Abbott R, Barton NH, Good J. 2016. Genomics of hybridization and its evolutionary consequences. Molecular Ecology. 25(11), 2325–2332.
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2016 | Thesis | IST-REx-ID: 1125
Novak S. 2016. Evolutionary proccesses in variable emvironments, IST Austria, 124p.
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2016 | Research Data | IST-REx-ID: 5552   OA
Ellis T. 2016. Pollinator visitation data for wild Antirrhinum majus plants, with phenotypic and frequency data., IST Austria,p.
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2016 | Journal Article | IST-REx-ID: 1358
Friedlander T, Prizak R, Guet CC, Barton NH, Tkacik G. 2016. Intrinsic limits to gene regulation by global crosstalk. Nature Communications. 7, 12307.
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2016 | Journal Article | IST-REx-ID: 1195   OA
Franssen S, Barton NH, Schlötterer C. 2016. Reconstruction of haplotype-blocks selected during experimental evolution. Molecular Biology and Evolution. 34(1), 174–184.
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2016 | Journal Article | IST-REx-ID: 1241   OA
Uecker H, Hermisson J. 2016. The role of recombination in evolutionary rescue. Genetics. 202(2), 721–732.
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2016 | Journal Article | IST-REx-ID: 1518   OA
Lohse K, Chmelik M, Martin S, Barton NH. 2016. Efficient strategies for calculating blockwise likelihoods under the coalescent. Genetics. 202(2), 775–786.
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2016 | Research Data | IST-REx-ID: 5553   OA
Field D, Ellis T. 2016. Inference of mating patterns among wild snapdragons in a natural hybrid zone in 2012, IST Austria,p.
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2016 | Journal Article | IST-REx-ID: 1359   OA
Paixao T, Barton NH. 2016. The effect of gene interactions on the long-term response to selection. PNAS. 113(16), 4422–4427.
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2016 | Journal Article | IST-REx-ID: 1158   OA
Roux C, Fraisse C, Romiguier J, Anciaux Y, Galtier N, Bierne N. 2016. Shedding light on the grey zone of speciation along a continuum of genomic divergence. PLoS Biology. 14(12), e2000234.
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2016 | Journal Article | IST-REx-ID: 1172   OA
Sachdeva H, Barma M, Rao M. 2016. Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae. Scientific Reports. 6, 38840.
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2016 | Journal Article | IST-REx-ID: 1420   OA
Bod’ová K, Tkacik G, Barton NH. 2016. A general approximation for the dynamics of quantitative traits. Genetics. 202(4), 1523–1548.
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2016 | Thesis | IST-REx-ID: 1398
Ellis T. 2016. The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone, IST Austria, 130p.
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2016 | Research Data | IST-REx-ID: 5554   OA
Tugrul M. 2016. Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase, IST Austria,p.
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2015 | Journal Article | IST-REx-ID: 1666   OA
Tugrul M, Paixao T, Barton NH, Tkacik G. 2015. Dynamics of transcription factor binding site evolution. PLoS Genetics. 11(11).
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2015 | Journal Article | IST-REx-ID: 1818   OA
Polechova J, Barton NH. 2015. Limits to adaptation along environmental gradients. PNAS. 112(20), 6401–6406.
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2015 | Journal Article | IST-REx-ID: 1851   OA
Priklopil T, Kisdi E, Gyllenberg M. 2015. Evolutionarily stable mating decisions for sequentially searching females and the stability of reproductive isolation by assortative mating. Evolution. 69(4), 1015–1026.
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2015 | Journal Article | IST-REx-ID: 1542   OA
Paixao T, Badkobeh G, Barton NH, Çörüş D, Dang D, Friedrich T, Lehre P, Sudholt D, Sutton A, Trubenova B. 2015. Toward a unifying framework for evolutionary processes. Journal of Theoretical Biology. 383, 28–43.
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2015 | Journal Article | IST-REx-ID: 1681   OA
Priklopil T, Chatterjee K. 2015. Evolution of decisions in population games with sequentially searching individuals. Games. 6(4), 413–437.
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2015 | Journal Article | IST-REx-ID: 1883   OA
Keller-Schmidt S, Tugrul M, Eguíluz V, Hernandez Garcia E, Klemm K. 2015. Anomalous scaling in an age-dependent branching model. Physical Review E Statistical Nonlinear and Soft Matter Physics. 91(2), 022803.
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2015 | Conference Paper | IST-REx-ID: 1430   OA
Paixao T, Sudholt D, Heredia J, Trubenova B. 2015. First steps towards a runtime comparison of natural and artificial evolution. Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation. GECCO: Genetic and evolutionary computation conference 1455–1462.
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2015 | Journal Article | IST-REx-ID: 1699   OA
Uecker H, Setter D, Hermisson J. 2015. Adaptive gene introgression after secondary contact. Journal of Mathematical Biology. 70(7), 1523–1580.
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2015 | Journal Article | IST-REx-ID: 1703
Broadhurst L, Fifield G, Vanzella B, Pickup M. 2015. An evaluation of the genetic structure of seed sources and the maintenance of genetic diversity during establishment of two yellow box (Eucalyptus melliodora) seed-production areas. Australian Journal of Botany. 63(5), 455–466.
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2015 | Journal Article | IST-REx-ID: 1809   OA
Trubenova B, Novak S, Hager R. 2015. Indirect genetic effects and the dynamics of social interactions. PLoS One. 10(5).
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2015 | Conference Paper | IST-REx-ID: 1835   OA
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. 2015. Model checking gene regulatory networks. 9035, 469–483.
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2015 | Journal Article | IST-REx-ID: 1519   OA
Barton NH, Servedio M. 2015. The interpretation of selection coefficients. Evolution. 69(5), 1101–1112.
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2015 | Journal Article | IST-REx-ID: 1850   OA
Novak S, Cremer S. 2015. Fungal disease dynamics in insect societies: Optimal killing rates and the ambivalent effect of high social interaction rates. Journal of Theoretical Biology. 372(5), 54–64.
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2014 | Journal Article | IST-REx-ID: 2169   OA
Barton NH, Novak S, Paixao T. 2014. Diverse forms of selection in evolution and computer science. PNAS. 111(29), 10398–10399.
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2014 | Journal Article | IST-REx-ID: 1908   OA
Weissman D, Hallatschek O. 2014. The rate of adaptation in large sexual populations with linear chromosomes. Genetics. 196(4), 1167–1183.
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2014 | Journal Article | IST-REx-ID: 1896   OA
Kollár R, Bod’ová K, Nosek J, Tomáška Ľ. 2014. Mathematical model of alternative mechanism of telomere length maintenance. Physical Review E Statistical Nonlinear and Soft Matter Physics. 89(3), 032701.
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2014 | Journal Article | IST-REx-ID: 1909   OA
Ezard T, Prizak R, Hoyle R. 2014. The fitness costs of adaptation via phenotypic plasticity and maternal effects. Functional Ecology. 28(3), 693–701.
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2014 | Journal Article | IST-REx-ID: 537   OA
Prizak R, Ezard T, Hoyle R. 2014. Fitness consequences of maternal and grandmaternal effects. Ecology and Evolution. 4(15), 3139–3145.
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2014 | Journal Article | IST-REx-ID: 1936   OA
Arbilly M, Weissman D, Feldman M, Grodzinski U. 2014. An arms race between producers and scroungers can drive the evolution of social cognition. Behavioral Ecology. 25(3), 487–495.
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2014 | Journal Article | IST-REx-ID: 2023   OA
Novak S. 2014. Habitat heterogeneities versus spatial type frequency variances as driving forces of dispersal evolution. Ecology and Evolution. 4(24), 4589–4597.
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2014 | Journal Article | IST-REx-ID: 2174   OA
De Vladar H, Barton NH. 2014. Stability and response of polygenic traits to stabilizing selection and mutation. Genetics. 197(2), 749–767.
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2014 | Journal Article | IST-REx-ID: 1932   OA
Trotter M, Weissman D, Peterson G, Peck K, Masel J. 2014. Cryptic genetic variation can make "irreducible complexity" a common mode of adaptation in sexual populations. Evolution. 68(12), 3357–3367.
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2014 | Journal Article | IST-REx-ID: 2168   OA
Kelleher J, Etheridge A, Barton NH. 2014. Coalescent simulation in continuous space: Algorithms for large neighbourhood size. Theoretical Population Biology. 95, 13–23.
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2014 | Journal Article | IST-REx-ID: 2170   OA
Hearn J, Stone G, Bunnefeld L, Nicholls J, Barton NH, Lohse K. 2014. Likelihood-based inference of population history from low-coverage de novo genome assemblies. Molecular Ecology. 23(1), 198–211.
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2013 | Journal Article | IST-REx-ID: 2823
Pickup M, Wilson S, Freudenberger D, Nicholls N, Gould L, Hnatiuk S, Delandre J. 2013. Post-fire recovery of revegetated woodland communities in south-eastern Australia. Austral Ecology. 38(3), 300–312.
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2013 | Journal Article | IST-REx-ID: 2842   OA
Barton NH, Etheridge A, Kelleher J, Véber A. 2013. Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks. Theoretical Population Biology. 87(1), 105–119.
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2013 | Journal Article | IST-REx-ID: 2944
Aeschbacher S, Futschik A, Beaumont M. 2013. Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates. . Molecular Ecology. 22(4), 987–1002.
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2013 | Journal Article | IST-REx-ID: 2817   OA
Novak S, Chatterjee K, Nowak M. 2013. Density games. Journal of Theoretical Biology. 334, 26–34.
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2013 | Book Chapter | IST-REx-ID: 2907   OA
Barton NH. 2013. Recombination and sex. The Princeton Guide to Evolution. 328–333.
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2013 | Journal Article | IST-REx-ID: 450   OA
Pickup M, Field D, Rowell D, Young A. 2013. Source population characteristics affect heterosis following genetic rescue of fragmented plant populations. Proceedings of the Royal Society of London Series B Biological Sciences. 280(1750), 2058.
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2013 | Journal Article | IST-REx-ID: 2287   OA
Pickup M, Barrett S. 2013. The influence of demography and local mating environment on sex ratios in a wind-pollinated dioecious plant. Ecology and Evolution. 3(3), 629–639.
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