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165 Publications

2017 | Journal Article | IST-REx-ID: 1199 | OA
N. H. Barton, “How does epistasis influence the response to selection?,” Heredity, vol. 118, pp. 96–109, 2017.
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2017 | Journal Article | IST-REx-ID: 1336 | OA
T. Paixao, J. Pérez Heredia, D. Sudholt, and B. Trubenova, “Towards a runtime comparison of natural and artificial evolution,” Algorithmica, vol. 78, no. 2, pp. 681–713, 2017.
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2017 | Journal Article | IST-REx-ID: 1351 | OA
M. Giacobbe, C. C. Guet, A. Gupta, T. A. Henzinger, T. Paixao, and T. Petrov, “Model checking the evolution of gene regulatory networks,” Acta Informatica, vol. 54, no. 8, pp. 765–787, 2017.
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2017 | Journal Article | IST-REx-ID: 1063 | OA
H. Uecker, “Evolutionary rescue in randomly mating, selfing, and clonal populations,” Evolution, vol. 71, no. 4, pp. 845–858, 2017.
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2017 | Journal Article | IST-REx-ID: 1074 | OA
H. Ringbauer, G. Coop, and N. H. Barton, “Inferring recent demography from isolation by distance of long shared sequence blocks,” Genetics, vol. 205, no. 3, pp. 1335–1351, 2017.
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2017 | Journal Article | IST-REx-ID: 1077 | OA
R. A. Fernandes Redondo, H. Vladar, T. Włodarski, and J. P. Bollback, “Evolutionary interplay between structure, energy and epistasis in the coat protein of the fX174 phage family,” Journal of the Royal Society Interface, vol. 14, no. 126, 2017.
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2017 | Journal Article | IST-REx-ID: 1111 | OA
J. Heredia, B. Trubenova, D. Sudholt, and T. Paixao, “Selection limits to adaptive walks on correlated landscapes,” Genetics, vol. 205, no. 2, pp. 803–825, 2017.
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2017 | Conference Paper | IST-REx-ID: 1112
T. Paixao and J. Pérez Heredia, “An application of stochastic differential equations to evolutionary algorithms,” in Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, Copenhagen, Denmark, 2017, pp. 3–11.
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2017 | Journal Article | IST-REx-ID: 1169 | OA
S. Novak and R. Kollár, “Spatial gene frequency waves under genotype dependent dispersal,” Genetics, vol. 205, no. 1, pp. 367–374, 2017.
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2016 | Journal Article | IST-REx-ID: 1631 | OA
J. Kelleher, A. Etheridge, A. Véber, and N. H. Barton, “Spread of pedigree versus genetic ancestry in spatially distributed populations,” Theoretical Population Biology, vol. 108, pp. 1–12, 2016.
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2016 | Journal Article | IST-REx-ID: 1195 | OA
S. Franssen, N. H. Barton, and C. Schlötterer, “Reconstruction of haplotype-blocks selected during experimental evolution.,” Molecular Biology and Evolution, vol. 34, no. 1, pp. 174–184, 2016.
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2016 | Journal Article | IST-REx-ID: 1224
Z. Teitel, M. Pickup, D. Field, and S. Barrett, “The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant,” Plant Biology, vol. 18, no. 1, pp. 98–103, 2016.
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2016 | Journal Article | IST-REx-ID: 1241 | OA
H. Uecker and J. Hermisson, “The role of recombination in evolutionary rescue,” Genetics, vol. 202, no. 2, pp. 721–732, 2016.
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2016 | Conference Paper | IST-REx-ID: 1349 | OA
P. Oliveto, T. Paixao, J. Heredia, D. Sudholt, and B. Trubenova, “When non-elitism outperforms elitism for crossing fitness valleys,” in Proceedings of the Genetic and Evolutionary Computation Conference 2016 , Denver, CO, USA, 2016, pp. 1163–1170.
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2016 | Journal Article | IST-REx-ID: 1356 | OA
N. H. Barton, “Sewall Wright on evolution in Mendelian populations and the ‘Shifting Balance,’” Genetics, vol. 202, no. 1, pp. 3–4, 2016.
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2016 | Journal Article | IST-REx-ID: 1357 | OA
N. H. Barton, “Richard Hudson and Norman Kaplan on the coalescent process,” Genetics, vol. 202, no. 3, pp. 865–866, 2016.
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2016 | Journal Article | IST-REx-ID: 1358 | OA
T. Friedlander, R. Prizak, C. C. Guet, N. H. Barton, and G. Tkačik, “Intrinsic limits to gene regulation by global crosstalk,” Nature Communications, vol. 7, 2016.
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2016 | Journal Article | IST-REx-ID: 1359 | OA
T. Paixao and N. H. Barton, “The effect of gene interactions on the long-term response to selection,” PNAS, vol. 113, no. 16, pp. 4422–4427, 2016.
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2016 | Journal Article | IST-REx-ID: 1382
T. Ellis and D. Field, “Repeated gains in yellow and anthocyanin pigmentation in flower colour transitions in the Antirrhineae,” Annals of Botany, vol. 117, no. 7, pp. 1133–1140, 2016.
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2016 | Thesis | IST-REx-ID: 1398 | OA
T. Ellis, The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone. IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1409 | OA
R. Abbott, N. H. Barton, and J. Good, “Genomics of hybridization and its evolutionary consequences,” Molecular Ecology, vol. 25, no. 11, pp. 2325–2332, 2016.
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2016 | Journal Article | IST-REx-ID: 1420 | OA
K. Bod’ová, G. Tkacik, and N. H. Barton, “A general approximation for the dynamics of quantitative traits,” Genetics, vol. 202, no. 4, pp. 1523–1548, 2016.
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2016 | Journal Article | IST-REx-ID: 1518 | OA
K. Lohse, M. Chmelik, S. Martin, and N. H. Barton, “Efficient strategies for calculating blockwise likelihoods under the coalescent,” Genetics, vol. 202, no. 2, pp. 775–786, 2016.
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2016 | Thesis | IST-REx-ID: 1125
S. Novak, Evolutionary proccesses in variable emvironments. IST Austria, 2016.
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2016 | Thesis | IST-REx-ID: 1131
M. Tugrul, Evolution of transcriptional regulatory sequences. IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1158 | OA
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, and N. Bierne, “Shedding light on the grey zone of speciation along a continuum of genomic divergence,” PLoS Biology, vol. 14, no. 12, 2016.
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2016 | Journal Article | IST-REx-ID: 1172 | OA
H. Sachdeva, M. Barma, and M. Rao, “Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae,” Scientific Reports, vol. 6, 2016.
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2015 | Journal Article | IST-REx-ID: 1542 | OA
T. Paixao et al., “Toward a unifying framework for evolutionary processes,” Journal of Theoretical Biology, vol. 383, pp. 28–43, 2015.
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2015 | Journal Article | IST-REx-ID: 1666 | OA
M. Tugrul, T. Paixao, N. H. Barton, and G. Tkačik, “Dynamics of transcription factor binding site evolution,” PLoS Genetics, vol. 11, no. 11, 2015.
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2015 | Journal Article | IST-REx-ID: 1681 | OA
T. Priklopil and K. Chatterjee, “Evolution of decisions in population games with sequentially searching individuals,” Games, vol. 6, no. 4, pp. 413–437, 2015.
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2015 | Journal Article | IST-REx-ID: 1699 | OA
H. Uecker, D. Setter, and J. Hermisson, “Adaptive gene introgression after secondary contact,” Journal of Mathematical Biology, vol. 70, no. 7, pp. 1523–1580, 2015.
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2015 | Journal Article | IST-REx-ID: 1703
L. Broadhurst, G. Fifield, B. Vanzella, and M. Pickup, “An evaluation of the genetic structure of seed sources and the maintenance of genetic diversity during establishment of two yellow box (Eucalyptus melliodora) seed-production areas,” Australian Journal of Botany, vol. 63, no. 5, pp. 455–466, 2015.
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2015 | Journal Article | IST-REx-ID: 1809 | OA
B. Trubenova, S. Novak, and R. Hager, “Indirect genetic effects and the dynamics of social interactions,” PLoS One, vol. 10, no. 5, 2015.
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2015 | Journal Article | IST-REx-ID: 1818 | OA
J. Polechova and N. H. Barton, “Limits to adaptation along environmental gradients,” PNAS, vol. 112, no. 20, pp. 6401–6406, 2015.
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2015 | Conference Paper | IST-REx-ID: 1835 | OA
M. Giacobbe, C. C. Guet, A. Gupta, T. A. Henzinger, T. Paixao, and T. Petrov, “Model checking gene regulatory networks,” vol. 9035. Springer, pp. 469–483, 2015.
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2015 | Journal Article | IST-REx-ID: 1850 | OA
S. Novak and S. Cremer, “Fungal disease dynamics in insect societies: Optimal killing rates and the ambivalent effect of high social interaction rates,” Journal of Theoretical Biology, vol. 372, no. 5, pp. 54–64, 2015.
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2015 | Journal Article | IST-REx-ID: 1851 | OA
T. Priklopil, E. Kisdi, and M. Gyllenberg, “Evolutionarily stable mating decisions for sequentially searching females and the stability of reproductive isolation by assortative mating,” Evolution, vol. 69, no. 4, pp. 1015–1026, 2015.
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2015 | Journal Article | IST-REx-ID: 1883 | OA
S. Keller-Schmidt, M. Tugrul, V. Eguíluz, E. Hernandez Garcia, and K. Klemm, “Anomalous scaling in an age-dependent branching model,” Physical Review E Statistical Nonlinear and Soft Matter Physics, vol. 91, no. 2, p. 022803, 2015.
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2015 | Conference Paper | IST-REx-ID: 1430 | OA
T. Paixao, D. Sudholt, J. Heredia, and B. Trubenova, “First steps towards a runtime comparison of natural and artificial evolution,” in Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation, Madrid, Spain, 2015, pp. 1455–1462.
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2015 | Journal Article | IST-REx-ID: 1519 | OA
N. H. Barton and M. Servedio, “The interpretation of selection coefficients,” Evolution, vol. 69, no. 5, pp. 1101–1112, 2015.
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2014 | Journal Article | IST-REx-ID: 2023 | OA
S. Novak, “Habitat heterogeneities versus spatial type frequency variances as driving forces of dispersal evolution,” Ecology and Evolution, vol. 4, no. 24, pp. 4589–4597, 2014.
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2014 | Journal Article | IST-REx-ID: 2168 | OA
J. Kelleher, A. Etheridge, and N. H. Barton, “Coalescent simulation in continuous space: Algorithms for large neighbourhood size,” Theoretical Population Biology, vol. 95, pp. 13–23, 2014.
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2014 | Journal Article | IST-REx-ID: 2169 | OA
N. H. Barton, S. Novak, and T. Paixao, “Diverse forms of selection in evolution and computer science,” PNAS, vol. 111, no. 29, pp. 10398–10399, 2014.
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2014 | Journal Article | IST-REx-ID: 2170 | OA
J. Hearn, G. Stone, L. Bunnefeld, J. Nicholls, N. H. Barton, and K. Lohse, “Likelihood-based inference of population history from low-coverage de novo genome assemblies,” Molecular Ecology, vol. 23, no. 1, pp. 198–211, 2014.
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2014 | Journal Article | IST-REx-ID: 2174 | OA
H. De Vladar and N. H. Barton, “Stability and response of polygenic traits to stabilizing selection and mutation,” Genetics, vol. 197, no. 2, pp. 749–767, 2014.
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2014 | Journal Article | IST-REx-ID: 537 | OA
R. Prizak, T. Ezard, and R. Hoyle, “Fitness consequences of maternal and grandmaternal effects,” Ecology and Evolution, vol. 4, no. 15, pp. 3139–3145, 2014.
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2014 | Journal Article | IST-REx-ID: 1896 | OA
R. Kollár, K. Bod’ová, J. Nosek, and Ľ. Tomáška, “Mathematical model of alternative mechanism of telomere length maintenance,” Physical Review E Statistical Nonlinear and Soft Matter Physics, vol. 89, no. 3, 2014.
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2014 | Journal Article | IST-REx-ID: 1908 | OA
D. Weissman and O. Hallatschek, “The rate of adaptation in large sexual populations with linear chromosomes,” Genetics, vol. 196, no. 4, pp. 1167–1183, 2014.
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2014 | Journal Article | IST-REx-ID: 1909 | OA
T. Ezard, R. Prizak, and R. Hoyle, “The fitness costs of adaptation via phenotypic plasticity and maternal effects,” Functional Ecology, vol. 28, no. 3, pp. 693–701, 2014.
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2014 | Journal Article | IST-REx-ID: 1932 | OA
M. Trotter, D. Weissman, G. Peterson, K. Peck, and J. Masel, “Cryptic genetic variation can make "irreducible complexity" a common mode of adaptation in sexual populations,” Evolution, vol. 68, no. 12, pp. 3357–3367, 2014.
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