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165 Publications

2017 | Journal Article | IST-REx-ID: 1199 | OA
How does epistasis influence the response to selection?
N.H. Barton, Heredity 118 (2017) 96–109.
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2017 | Journal Article | IST-REx-ID: 1336 | OA
Towards a runtime comparison of natural and artificial evolution
T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 78 (2017) 681–713.
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2017 | Journal Article | IST-REx-ID: 1351 | OA
Model checking the evolution of gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.
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2017 | Journal Article | IST-REx-ID: 1063 | OA View | DOI | Download Submitted Version (ext.)
 
2017 | Journal Article | IST-REx-ID: 1074 | OA
Inferring recent demography from isolation by distance of long shared sequence blocks
H. Ringbauer, G. Coop, N.H. Barton, Genetics 205 (2017) 1335–1351.
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2017 | Journal Article | IST-REx-ID: 1077 | OA
Evolutionary interplay between structure, energy and epistasis in the coat protein of the fX174 phage family
R.A. Fernandes Redondo, H. Vladar, T. Włodarski, J.P. Bollback, Journal of the Royal Society Interface 14 (2017).
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2017 | Journal Article | IST-REx-ID: 1111 | OA
Selection limits to adaptive walks on correlated landscapes
J. Heredia, B. Trubenova, D. Sudholt, T. Paixao, Genetics 205 (2017) 803–825.
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2017 | Conference Paper | IST-REx-ID: 1112
An application of stochastic differential equations to evolutionary algorithms
T. Paixao, J. Pérez Heredia, in:, Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, ACM, 2017, pp. 3–11.
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2017 | Journal Article | IST-REx-ID: 1169 | OA
Spatial gene frequency waves under genotype dependent dispersal
S. Novak, R. Kollár, Genetics 205 (2017) 367–374.
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2016 | Journal Article | IST-REx-ID: 1631 | OA
Spread of pedigree versus genetic ancestry in spatially distributed populations
J. Kelleher, A. Etheridge, A. Véber, N.H. Barton, Theoretical Population Biology 108 (2016) 1–12.
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2016 | Journal Article | IST-REx-ID: 1195 | OA
Reconstruction of haplotype-blocks selected during experimental evolution.
S. Franssen, N.H. Barton, C. Schlötterer, Molecular Biology and Evolution 34 (2016) 174–184.
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2016 | Journal Article | IST-REx-ID: 1224
The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant
Z. Teitel, M. Pickup, D. Field, S. Barrett, Plant Biology 18 (2016) 98–103.
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2016 | Journal Article | IST-REx-ID: 1241 | OA
The role of recombination in evolutionary rescue
H. Uecker, J. Hermisson, Genetics 202 (2016) 721–732.
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2016 | Conference Paper | IST-REx-ID: 1349 | OA
When non-elitism outperforms elitism for crossing fitness valleys
P. Oliveto, T. Paixao, J. Heredia, D. Sudholt, B. Trubenova, in:, Proceedings of the Genetic and Evolutionary Computation Conference 2016 , ACM, 2016, pp. 1163–1170.
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2016 | Journal Article | IST-REx-ID: 1356 | OA View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1357 | OA
Richard Hudson and Norman Kaplan on the coalescent process
N.H. Barton, Genetics 202 (2016) 865–866.
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2016 | Journal Article | IST-REx-ID: 1358 | OA
Intrinsic limits to gene regulation by global crosstalk
T. Friedlander, R. Prizak, C.C. Guet, N.H. Barton, G. Tkačik, Nature Communications 7 (2016).
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2016 | Journal Article | IST-REx-ID: 1359 | OA
The effect of gene interactions on the long-term response to selection
T. Paixao, N.H. Barton, PNAS 113 (2016) 4422–4427.
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2016 | Journal Article | IST-REx-ID: 1382 View | Files available | DOI
 
2016 | Thesis | IST-REx-ID: 1398 | OA
The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone
T. Ellis, The Role of Pollinator-Mediated Selection in the Maintenance of a Flower Color Polymorphism in an Antirrhinum Majus Hybrid Zone, IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1409 | OA
Genomics of hybridization and its evolutionary consequences
R. Abbott, N.H. Barton, J. Good, Molecular Ecology 25 (2016) 2325–2332.
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2016 | Journal Article | IST-REx-ID: 1420 | OA
A general approximation for the dynamics of quantitative traits
K. Bod’ová, G. Tkacik, N.H. Barton, Genetics 202 (2016) 1523–1548.
View | DOI | Download Preprint (ext.) | arXiv
 
2016 | Journal Article | IST-REx-ID: 1518 | OA
Efficient strategies for calculating blockwise likelihoods under the coalescent
K. Lohse, M. Chmelik, S. Martin, N.H. Barton, Genetics 202 (2016) 775–786.
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2016 | Thesis | IST-REx-ID: 1125
Evolutionary proccesses in variable emvironments
S. Novak, Evolutionary Proccesses in Variable Emvironments, IST Austria, 2016.
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2016 | Thesis | IST-REx-ID: 1131
Evolution of transcriptional regulatory sequences
M. Tugrul, Evolution of Transcriptional Regulatory Sequences, IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1158 | OA
Shedding light on the grey zone of speciation along a continuum of genomic divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
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2016 | Journal Article | IST-REx-ID: 1172 | OA
Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae
H. Sachdeva, M. Barma, M. Rao, Scientific Reports 6 (2016).
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2015 | Journal Article | IST-REx-ID: 1542 | OA
Toward a unifying framework for evolutionary processes
T. Paixao, G. Badkobeh, N.H. Barton, D. Çörüş, D. Dang, T. Friedrich, P. Lehre, D. Sudholt, A. Sutton, B. Trubenova, Journal of Theoretical Biology 383 (2015) 28–43.
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2015 | Journal Article | IST-REx-ID: 1666 | OA
Dynamics of transcription factor binding site evolution
M. Tugrul, T. Paixao, N.H. Barton, G. Tkačik, PLoS Genetics 11 (2015).
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2015 | Journal Article | IST-REx-ID: 1681 | OA
Evolution of decisions in population games with sequentially searching individuals
T. Priklopil, K. Chatterjee, Games 6 (2015) 413–437.
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2015 | Journal Article | IST-REx-ID: 1699 | OA
Adaptive gene introgression after secondary contact
H. Uecker, D. Setter, J. Hermisson, Journal of Mathematical Biology 70 (2015) 1523–1580.
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2015 | Journal Article | IST-REx-ID: 1703 View | DOI
 
2015 | Journal Article | IST-REx-ID: 1809 | OA
Indirect genetic effects and the dynamics of social interactions
B. Trubenova, S. Novak, R. Hager, PLoS One 10 (2015).
View | Files available | DOI
 
2015 | Journal Article | IST-REx-ID: 1818 | OA
Limits to adaptation along environmental gradients
J. Polechova, N.H. Barton, PNAS 112 (2015) 6401–6406.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2015 | Conference Paper | IST-REx-ID: 1835 | OA
Model checking gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
View | Files available | DOI | Download Preprint (ext.)
 
2015 | Journal Article | IST-REx-ID: 1850 | OA View | Files available | DOI
 
2015 | Journal Article | IST-REx-ID: 1851 | OA View | Files available | DOI
 
2015 | Journal Article | IST-REx-ID: 1883 | OA
Anomalous scaling in an age-dependent branching model
S. Keller-Schmidt, M. Tugrul, V. Eguíluz, E. Hernandez Garcia, K. Klemm, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015) 022803.
View | DOI | Download Preprint (ext.) | arXiv
 
2015 | Conference Paper | IST-REx-ID: 1430 | OA
First steps towards a runtime comparison of natural and artificial evolution
T. Paixao, D. Sudholt, J. Heredia, B. Trubenova, in:, Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation, ACM, 2015, pp. 1455–1462.
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2015 | Journal Article | IST-REx-ID: 1519 | OA
The interpretation of selection coefficients
N.H. Barton, M. Servedio, Evolution 69 (2015) 1101–1112.
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2014 | Journal Article | IST-REx-ID: 2023 | OA View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 2168 | OA
Coalescent simulation in continuous space: Algorithms for large neighbourhood size
J. Kelleher, A. Etheridge, N.H. Barton, Theoretical Population Biology 95 (2014) 13–23.
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2014 | Journal Article | IST-REx-ID: 2169 | OA
Diverse forms of selection in evolution and computer science
N.H. Barton, S. Novak, T. Paixao, PNAS 111 (2014) 10398–10399.
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2014 | Journal Article | IST-REx-ID: 2170 | OA
Likelihood-based inference of population history from low-coverage de novo genome assemblies
J. Hearn, G. Stone, L. Bunnefeld, J. Nicholls, N.H. Barton, K. Lohse, Molecular Ecology 23 (2014) 198–211.
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2014 | Journal Article | IST-REx-ID: 2174 | OA
Stability and response of polygenic traits to stabilizing selection and mutation
H. De Vladar, N.H. Barton, Genetics 197 (2014) 749–767.
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2014 | Journal Article | IST-REx-ID: 537 | OA
Fitness consequences of maternal and grandmaternal effects
R. Prizak, T. Ezard, R. Hoyle, Ecology and Evolution 4 (2014) 3139–3145.
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2014 | Journal Article | IST-REx-ID: 1896 | OA
Mathematical model of alternative mechanism of telomere length maintenance
R. Kollár, K. Bod’ová, J. Nosek, Ľ. Tomáška, Physical Review E Statistical Nonlinear and Soft Matter Physics 89 (2014).
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2014 | Journal Article | IST-REx-ID: 1908 | OA
The rate of adaptation in large sexual populations with linear chromosomes
D. Weissman, O. Hallatschek, Genetics 196 (2014) 1167–1183.
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2014 | Journal Article | IST-REx-ID: 1909 | OA
The fitness costs of adaptation via phenotypic plasticity and maternal effects
T. Ezard, R. Prizak, R. Hoyle, Functional Ecology 28 (2014) 693–701.
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2014 | Journal Article | IST-REx-ID: 1932 | OA
Cryptic genetic variation can make "irreducible complexity" a common mode of adaptation in sexual populations
M. Trotter, D. Weissman, G. Peterson, K. Peck, J. Masel, Evolution 68 (2014) 3357–3367.
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