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211 Publications

2019 | Journal Article | IST-REx-ID: 6095 | OA
Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes
R. Faria, P. Chaube, H.E. Morales, T. Larsson, A.R. Lemmon, E.M. Lemmon, M. Rafajlović, M. Panova, M. Ravinet, K. Johannesson, A.M. Westram, R.K. Butlin, Molecular Ecology 28 (2019) 1375–1393.
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2019 | Research Data Reference | IST-REx-ID: 9839 View | Files available | DOI
 
2019 | Journal Article | IST-REx-ID: 6467 | OA
The distribution of epistasis on simple fitness landscapes
C. Fraisse, J.J. Welch, Biology Letters 15 (2019).
View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2018 | Journal Article | IST-REx-ID: 282 | OA
Introgression of a block of genome under infinitesimal selection
H. Sachdeva, N.H. Barton, Genetics 209 (2018) 1279–1303.
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2018 | Journal Article | IST-REx-ID: 286
Efficient inference of paternity and sibship inference given known maternity via hierarchical clustering
T. Ellis, D. Field, N.H. Barton, Molecular Ecology Resources 18 (2018) 988–999.
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2018 | Thesis | IST-REx-ID: 200 | OA
Inferring recent demography from spatial genetic structure
H. Ringbauer, Inferring Recent Demography from Spatial Genetic Structure, IST Austria, 2018.
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2018 | Journal Article | IST-REx-ID: 723 | OA
How to escape local optima in black box optimisation when non elitism outperforms elitism
P. Oliveto, T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 80 (2018) 1604–1633.
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2018 | Journal Article | IST-REx-ID: 563 | OA
Estimating barriers to gene flow from distorted isolation-by-distance patterns
H. Ringbauer, A. Kolesnikov, D. Field, N.H. Barton, Genetics 208 (2018) 1231–1245.
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2018 | Journal Article | IST-REx-ID: 565 | OA
The spread of an inversion with migration and selection
B. Charlesworth, N.H. Barton, Genetics 208 (2018) 377–382.
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2018 | Journal Article | IST-REx-ID: 607 | OA
Well posedness and maximum entropy approximation for the dynamics of quantitative traits
K. Bod’ová, J. Haskovec, P. Markowich, Physica D: Nonlinear Phenomena 376–377 (2018) 108–120.
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2018 | Journal Article | IST-REx-ID: 139 | OA View | Files available | DOI
 
2018 | Journal Article | IST-REx-ID: 38 | OA
Selection and gene flow shape genomic islands that control floral guides
H. Tavares, A. Whitley, D. Field, D. Bradley, M. Couchman, L. Copsey, J. Elleouet, M. Burrus, C. Andalo, M. Li, Q. Li, Y. Xue, A.B. Rebocho, N.H. Barton, E. Coen, PNAS 115 (2018) 11006–11011.
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2018 | Journal Article | IST-REx-ID: 39 | OA
Replicability of introgression under linked, polygenic selection
H. Sachdeva, N.H. Barton, Genetics 210 (2018) 1411–1427.
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2018 | Journal Article | IST-REx-ID: 430 | OA
Tread lightly interpreting polygenic tests of selection
J. Novembre, N.H. Barton, Genetics 208 (2018) 1351–1355.
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2018 | Journal Article | IST-REx-ID: 33 | OA View | Files available | DOI | PubMed | Europe PMC
 
2018 | Journal Article | IST-REx-ID: 40 | OA
The consequences of an introgression event
N.H. Barton, Molecular Ecology 27 (2018) 4973–4975.
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2018 | Journal Article | IST-REx-ID: 316 | OA
Evolutionary pathways for the generation of new self-incompatibility haplotypes in a non-self recognition system
K. Bod’ová, T. Priklopil, D. Field, N.H. Barton, M. Pickup, Genetics 209 (2018) 861–883.
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2018 | Research Data Reference | IST-REx-ID: 9813
Supplemental material for Boďová et al., 2018
K. Bod’ová, T. Priklopil, D. Field, N.H. Barton, M. Pickup, (2018).
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2018 | Research Data Reference | IST-REx-ID: 9837
Data from: Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes
R. Faria, P. Chaube, H.E. Morales, T. Larsson, A.R. Lemmon, E.M. Lemmon, M. Rafajlović, M. Panova, M. Ravinet, K. Johannesson, A.M. Westram, R.K. Butlin, (2018).
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2018 | Journal Article | IST-REx-ID: 564 | OA
Establishment in a new habitat by polygenic adaptation
N.H. Barton, A. Etheridge, Theoretical Population Biology 122 (2018) 110–127.
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2018 | Journal Article | IST-REx-ID: 423 | OA
CRISPR-based herd immunity can limit phage epidemics in bacterial populations
P. Payne, L. Geyrhofer, N.H. Barton, J.P. Bollback, ELife 7 (2018).
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2018 | Research Data Reference | IST-REx-ID: 9840
Data from: CRISPR-based herd immunity limits phage epidemics in bacterial populations
P. Payne, L. Geyrhofer, N.H. Barton, J.P. Bollback, (2018).
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2018 | Journal Article | IST-REx-ID: 315 | OA View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 570 | OA
Regulatory network structure determines patterns of intermolecular epistasis
M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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2017 | Journal Article | IST-REx-ID: 611
Evolution of flower color pattern through selection on regulatory small RNAs
D. Bradley, P. Xu, I. Mohorianu, A. Whibley, D. Field, H. Tavares, M. Couchman, L. Copsey, R. Carpenter, M. Li, Q. Li, Y. Xue, T. Dalmay, E. Coen, Science 358 (2017) 925–928.
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2017 | Journal Article | IST-REx-ID: 614 | OA
The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W
C. Fraisse, M.A.L. Picard, B. Vicoso, Nature Communications 8 (2017).
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2017 | Journal Article | IST-REx-ID: 626 | OA
The infinitesimal model: Definition derivation and implications
N.H. Barton, A. Etheridge, A. Véber, Theoretical Population Biology 118 (2017) 50–73.
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2017 | Journal Article | IST-REx-ID: 1336 | OA
Towards a runtime comparison of natural and artificial evolution
T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 78 (2017) 681–713.
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2017 | Journal Article | IST-REx-ID: 1351 | OA
Model checking the evolution of gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.
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2017 | Journal Article | IST-REx-ID: 1063 | OA View | DOI | Download Submitted Version (ext.)
 
2017 | Journal Article | IST-REx-ID: 1074 | OA
Inferring recent demography from isolation by distance of long shared sequence blocks
H. Ringbauer, G. Coop, N.H. Barton, Genetics 205 (2017) 1335–1351.
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2017 | Journal Article | IST-REx-ID: 1111 | OA
Selection limits to adaptive walks on correlated landscapes
J. Heredia, B. Trubenova, D. Sudholt, T. Paixao, Genetics 205 (2017) 803–825.
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2017 | Conference Paper | IST-REx-ID: 1112
An application of stochastic differential equations to evolutionary algorithms
T. Paixao, J. Pérez Heredia, in:, Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, ACM, 2017, pp. 3–11.
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2017 | Journal Article | IST-REx-ID: 1169 | OA
Spatial gene frequency waves under genotype dependent dispersal
S. Novak, R. Kollár, Genetics 205 (2017) 367–374.
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2017 | Journal Article | IST-REx-ID: 1191 | OA
Existence of traveling waves for the generalized F–KPP equation
R. Kollár, S. Novak, Bulletin of Mathematical Biology 79 (2017) 525–559.
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2017 | Journal Article | IST-REx-ID: 910 | OA
When does frequency-independent selection maintain genetic variation?
S. Novak, N.H. Barton, Genetics 207 (2017) 653–668.
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2017 | Journal Article | IST-REx-ID: 952 | OA
Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti
M. Turelli, N.H. Barton, Theoretical Population Biology 115 (2017) 45–60.
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2017 | Journal Article | IST-REx-ID: 953 | OA
The sources of adaptive evolution
D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
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2017 | Journal Article | IST-REx-ID: 954 | OA
On the mechanistic nature of epistasis in a canonical cis-regulatory element
M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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2017 | Journal Article | IST-REx-ID: 955 | OA
Evolution of new regulatory functions on biophysically realistic fitness landscapes
T. Friedlander, R. Prizak, N.H. Barton, G. Tkačik, Nature Communications 8 (2017).
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2017 | Journal Article | IST-REx-ID: 990 | OA
Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow
H. Sachdeva, N.H. Barton, Evolution; International Journal of Organic Evolution 71 (2017) 1478–1493.
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2017 | Thesis | IST-REx-ID: 6291 | OA
Bacterial herd and social immunity to phages
P. Payne, Bacterial Herd and Social Immunity to Phages, IST Austria, 2017.
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2017 | Journal Article | IST-REx-ID: 1199 | OA
How does epistasis influence the response to selection?
N.H. Barton, Heredity 118 (2017) 96–109.
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2017 | Research Data Reference | IST-REx-ID: 9842 View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9851
Heuristic prediction for multiple stresses
M. Lukacisinova, S. Novak, T. Paixao, (2017).
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2017 | Research Data Reference | IST-REx-ID: 9852
Resistance frequencies for different combination strategies
M. Lukacisinova, S. Novak, T. Paixao, (2017).
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2017 | Research Data Reference | IST-REx-ID: 9849
Modelling and simulation details
M. Lukacisinova, S. Novak, T. Paixao, (2017).
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2017 | Research Data Reference | IST-REx-ID: 9850
Extensions of the model
M. Lukacisinova, S. Novak, T. Paixao, (2017).
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2017 | Journal Article | IST-REx-ID: 951 | OA
Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology 15 (2017).
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2017 | Research Data Reference | IST-REx-ID: 9858
Excel file with data on mosquito densities, Wolbachia infection status and housing characteristics
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
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