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157 Publications

2019 | Journal Article | IST-REx-ID: 5911
Faria R, Johannesson K, Butlin RK, Westram AM. 2019. Evolving inversions. Trends in Ecology and Evolution.
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2019 | Journal Article | IST-REx-ID: 6022   OA
Merrill RM, Rastas P, Martin SH, Melo Hurtado MC, Barker S, Davey J, Mcmillan WO, Jiggins CD. 2019. Genetic dissection of assortative mating behavior. PLoS Biology. 17(2), e2005902.
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2019 | Journal Article | IST-REx-ID: 6089   OA
Fraisse C, Puixeu Sala G, Vicoso B. 2019. Pleiotropy modulates the efficacy of selection in drosophila melanogaster. Molecular biology and evolution. 36(3), 500–515.
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2019 | Journal Article | IST-REx-ID: 6680   OA
Sachdeva H. 2019. Effect of partial selfing and polygenic selection on establishment in a new habitat. Evolution. 73(9), 1729–1745.
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2019 | Journal Article | IST-REx-ID: 6856   OA
Pickup M, Barton NH, Brandvain Y, Fraisse C, Yakimowski S, Dixit T, Lexer C, Cereghetti E, Field D. 2019. Mating system variation in hybrid zones: Facilitation, barriers and asymmetries to gene flow. New Phytologist. 224(3), 1035–1047.
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2019 | Journal Article | IST-REx-ID: 6713   OA
Castro JP, Yancoskie MN, Marchini M, Belohlavy S, Hiramatsu L, Kučka M, Beluch WH, Naumann R, Skuplik I, Cobb J, Barton NH, Rolian C, Chan YF. 2019. An integrative genomic analysis of the Longshanks selection experiment for longer limbs in mice. eLife. 8, e42014.
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2019 | Journal Article | IST-REx-ID: 6857   OA
Giese B, Friess JL, Schetelig MF, Barton NH, Messer P, Debarre F, Meimberg H, Windbichler N, Boete C. 2019. Gene Drives: Dynamics and regulatory matters – A report from the workshop “Evaluation of spatial and temporal control of Gene Drives”, 4 – 5 April 2019, Vienna. BioEssays., 1900151.
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2019 | Journal Article | IST-REx-ID: 6466   OA
Field D, Fraisse C. 2019. Breaking down barriers in morning glories. Molecular ecology. 28(7), 1579–1581.
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2019 | Journal Article | IST-REx-ID: 6637   OA
Trubenova B, Krejca M, Lehre PK, Kötzing T. 2019. Surfing on the seascape: Adaptation in a changing environment. Evolution. 73(7), 1356–1374.
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2019 | Journal Article | IST-REx-ID: 6795   OA
Trubenova B, Hager R. 2019. Green beards in the light of indirect genetic effects. Ecology and Evolution.
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2019 | Journal Article | IST-REx-ID: 6858
Barton NH. 2019. Is speciation driven by cycles of mixing and isolation? National Science Review. 6(2), 291–292.
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2019 | Journal Article | IST-REx-ID: 5680
Andalo C, Burrus M, Paute S, Lauzeral C, Field D. 2019. Prevalence of legitimate pollinators and nectar robbers and the consequences for fruit set in an Antirrhinum majus hybrid zone. Botany Letters. 166(1), 80–92.
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2019 | Journal Article | IST-REx-ID: 6467
Fraisse C, Welch JJ. 2019. The distribution of epistasis on simple fitness landscapes. Biology Letters. 15(4).
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2019 | Journal Article | IST-REx-ID: 6090   OA
Carballo-Pacheco M, Desponds J, Gavrilchenko T, Mayer A, Prizak R, Reddy G, Nemenman I, Mora T. 2019. Receptor crosstalk improves concentration sensing of multiple ligands. Physical Review E. 99(2), 022423.
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2019 | Journal Article | IST-REx-ID: 6095   OA
Faria R, Chaube P, Morales HE, Larsson T, Lemmon AR, Lemmon EM, Rafajlović M, Panova M, Ravinet M, Johannesson K, Westram AM, Butlin RK. 2019. Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes. Molecular Ecology.
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2019 | Journal Article | IST-REx-ID: 6230   OA
Barton NH, Hermisson J, Nordborg M. 2019. Why structure matters. eLife. 8, e45380.
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2019 | Journal Article | IST-REx-ID: 6831   OA
Puixeu Sala G, Pickup M, Field D, Barrett SCH. 2019. Variation in sexual dimorphism in a wind-pollinated plant: The influence of geographical context and life-cycle dynamics. New Phytologist.
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2019 | Journal Article | IST-REx-ID: 6855   OA
Sella G, Barton NH. 2019. Thinking about the evolution of complex traits in the era of genome-wide association studies. Annual Review of Genomics and Human Genetics. 20, 461–493.
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2019 | Thesis | IST-REx-ID: 6071
Prizak R. 2019. Coevolution of transcription factors and their binding sites in sequence space, IST Austria, 189p.
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2018 | Journal Article | IST-REx-ID: 282   OA
Sachdeva H, Barton NH. 2018. Introgression of a block of genome under infinitesimal selection. Genetics. 209(4), 1279–1303.
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2018 | Journal Article | IST-REx-ID: 315   OA
Polechova J. 2018. Is the sky the limit? On the expansion threshold of a species’ range. PLoS Biology. 16(6).
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2018 | Journal Article | IST-REx-ID: 396
Ellis T, Field D, Barton NH. 2018. Inference from paternity and sibships accounting for uncertainty in genealogy. Molecular Ecology Resources. 18(5), 988–999.
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2018 | Journal Article | IST-REx-ID: 430   OA
Novembre J, Barton NH. 2018. Tread lightly interpreting polygenic tests of selection. Genetics. 208(4), 1351–1355.
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2018 | Journal Article | IST-REx-ID: 423   OA
Payne P, Geyrhofer L, Barton NH, Bollback JP. 2018. CRISPR-based herd immunity can limit phage epidemics in bacterial populations. eLife. 7.
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2018 | Journal Article | IST-REx-ID: 316   OA
Bodova K, Priklopil T, Field D, Barton NH, Pickup M. 2018. Evolutionary pathways for the generation of new self-incompatibility haplotypes in a non-self recognition system. Genetics. 209(3), 861–883.
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2018 | Journal Article | IST-REx-ID: 563   OA
Ringbauer H, Kolesnikov A, Field D, Barton NH. 2018. Estimating barriers to gene flow from distorted isolation-by-distance patterns. Genetics. 208(3), 1231–1245.
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2018 | Journal Article | IST-REx-ID: 607   OA
Bodova K, Haskovec J, Markowich P. 2018. Well posedness and maximum entropy approximation for the dynamics of quantitative traits. Physica D: Nonlinear Phenomena. 376–377, 108–120.
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2018 | Journal Article | IST-REx-ID: 139   OA
Fraisse C, Roux C, Gagnaire P, Romiguier J, Faivre N, Welch J, Bierne N. 2018. The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: The effects of sequencing techniques and sampling strategies. PeerJ. 2018(7).
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2018 | Journal Article | IST-REx-ID: 33   OA
Bertl J, Ringbauer H, Blum M. 2018. Can secondary contact following range expansion be distinguished from barriers to gene flow? PeerJ. 2018(10).
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2018 | Journal Article | IST-REx-ID: 38   OA
Tavares H, Whitley A, Field D, Bradley D, Couchman M, Copsey L, Elleouet J, Burrus M, Andalo C, Li M, Li Q, Xue Y, Rebocho AB, Barton NH, Coen E. 2018. Selection and gene flow shape genomic islands that control floral guides. PNAS. 115(43), 11006–11011.
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2018 | Journal Article | IST-REx-ID: 40   OA
Barton NH. 2018. The consequences of an introgression event. Molecular Ecology. 27(24), 4973–4975.
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2018 | Journal Article | IST-REx-ID: 564
Barton NH, Etheridge A. 2018. Establishment in a new habitat by polygenic adaptation. Theoretical Population Biology. 122(7), 110–127.
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2018 | Journal Article | IST-REx-ID: 723   OA
Oliveto P, Paixao T, Pérez Heredia J, Sudholt D, Trubenova B. 2018. How to escape local optima in black box optimisation when non elitism outperforms elitism. Algorithmica. 80(5), 1604–1633.
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2018 | Journal Article | IST-REx-ID: 39   OA
Sachdeva H, Barton NH. 2018. Replicability of introgression under linked, polygenic selection. Genetics. 210(4), 1411–1427.
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2018 | Journal Article | IST-REx-ID: 286
Ellis T, Field D, Barton NH. 2018. Efficient inference of paternity and sibship inference given known maternity via hierarchical clustering. Molecular Ecology Resources. 18(5), 988–999.
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2018 | Thesis | IST-REx-ID: 200
Ringbauer H. 2018. Inferring recent demography from spatial genetic structure, IST Austria, 146p.
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2018 | Journal Article | IST-REx-ID: 565   OA
Charlesworth B, Barton NH. 2018. The spread of an inversion with migration and selection. Genetics. 208(1), 377–382.
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2017 | Journal Article | IST-REx-ID: 1111   OA
Heredia J, Trubenova B, Sudholt D, Paixao T. 2017. Selection limits to adaptive walks on correlated landscapes. Genetics. 205(2), 803–825.
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2017 | Journal Article | IST-REx-ID: 1351
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. 2017. Model checking the evolution of gene regulatory networks. Acta Informatica. 54(8), 765–787.
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2017 | Journal Article | IST-REx-ID: 910   OA
Novak S, Barton NH. 2017. When does frequency-independent selection maintain genetic variation? Genetics. 207(2), 653–668.
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2017 | Journal Article | IST-REx-ID: 953   OA
Charlesworth D, Barton NH, Charlesworth B. 2017. The sources of adaptive evolution. Proceedings of the Royal Society of London Series B Biological Sciences. 284(1855).
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2017 | Journal Article | IST-REx-ID: 1077   OA
Fernandes Redondo RA, Vladar H, Włodarski T, Bollback JP. 2017. Evolutionary interplay between structure, energy and epistasis in the coat protein of the fX174 phage family. Journal of the Royal Society Interface. 14(126), 20160139.
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2017 | Conference Paper | IST-REx-ID: 1112
Paixao T, Pérez Heredia J. 2017. An application of stochastic differential equations to evolutionary algorithms. Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms. FOGA: Foundations of Genetic Algorithms 3–11.
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2017 | Journal Article | IST-REx-ID: 954   OA
Lagator M, Paixao T, Barton NH, Bollback JP, Guet CC. 2017. On the mechanistic nature of epistasis in a canonical cis-regulatory element. eLife. 6.
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2017 | Journal Article | IST-REx-ID: 1199   OA
Barton NH. 2017. How does epistasis influence the response to selection? Heredity. 118, 96–109.
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2017 | Journal Article | IST-REx-ID: 1074
Ringbauer H, Coop G, Barton NH. 2017. Inferring recent demography from isolation by distance of long shared sequence blocks. Genetics. 205(3), 1335–1351.
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2017 | Journal Article | IST-REx-ID: 570   OA
Lagator M, Sarikas S, Acar H, Bollback JP, Guet CC. 2017. Regulatory network structure determines patterns of intermolecular epistasis. eLife. 6.
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2017 | Journal Article | IST-REx-ID: 626   OA
Barton NH, Etheridge A, Véber A. 2017. The infinitesimal model: Definition derivation and implications. Theoretical Population Biology. 118, 50–73.
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2017 | Journal Article | IST-REx-ID: 955   OA
Friedlander T, Prizak R, Barton NH, Tkacik G. 2017. Evolution of new regulatory functions on biophysically realistic fitness landscapes. Nature Communications. 8(1), 216.
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2017 | Journal Article | IST-REx-ID: 614
Fraisse C, Picard MA, Vicoso B. 2017. The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W. Nature Communications. 8(1), 1486.
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2017 | Journal Article | IST-REx-ID: 1063   OA
Uecker H. 2017. Evolutionary rescue in randomly mating, selfing, and clonal populations. Evolution. 71(4), 845–858.
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2017 | Journal Article | IST-REx-ID: 1169   OA
Novak S, Kollár R. 2017. Spatial gene frequency waves under genotype dependent dispersal. Genetics. 205(1), 367–374.
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2017 | Thesis | IST-REx-ID: 6291
Payne P. 2017. Bacterial herd and social immunity to phages, IST Austria, 83p.
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2017 | Journal Article | IST-REx-ID: 696   OA
Lukacisinova M, Novak S, Paixao T. 2017. Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology. 13(7), e1005609.
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2017 | Journal Article | IST-REx-ID: 951   OA
Schmidt T, Barton NH, Rasic G, Turley A, Montgomery B, Iturbe Ormaetxe I, Cook P, Ryan P, Ritchie S, Hoffmann A, O’Neill S, Turelli M. 2017. Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti. PLoS Biology. 15(5).
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2017 | Journal Article | IST-REx-ID: 1191   OA
Kollár R, Novak S. 2017. Existence of traveling waves for the generalized F–KPP equation. Bulletin of Mathematical Biology. 79(3), 525–559.
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2017 | Journal Article | IST-REx-ID: 1336   OA
Paixao T, Pérez Heredia J, Sudholt D, Trubenova B. 2017. Towards a runtime comparison of natural and artificial evolution. Algorithmica. 78(2), 681–713.
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2017 | Journal Article | IST-REx-ID: 611
Bradley D, Xu P, Mohorianu I, Whibley A, Field D, Tavares H, Couchman M, Copsey L, Carpenter R, Li M, Li Q, Xue Y, Dalmay T, Coen E. 2017. Evolution of flower color pattern through selection on regulatory small RNAs. Science. 358(6365), 925–928.
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2017 | Journal Article | IST-REx-ID: 952   OA
Turelli M, Barton NH. 2017. Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti. Theoretical Population Biology. 115, 45–60.
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2017 | Journal Article | IST-REx-ID: 990   OA
Sachdeva H, Barton NH. 2017. Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow. Evolution; International Journal of Organic Evolution. 71(6), 1478–1493.
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2016 | Journal Article | IST-REx-ID: 1224
Teitel Z, Pickup M, Field D, Barrett S. 2016. The dynamics of resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant. Plant Biology. 18(1), 98–103.
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2016 | Conference Paper | IST-REx-ID: 1349   OA
Oliveto P, Paixao T, Heredia J, Sudholt D, Trubenova B. 2016. When non-elitism outperforms elitism for crossing fitness valleys. Proceedings of the Genetic and Evolutionary Computation Conference 2016 . GECCO: Genetic and evolutionary computation conference 1163–1170.
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2016 | Journal Article | IST-REx-ID: 1356   OA
Barton NH. 2016. Sewall Wright on evolution in Mendelian populations and the “Shifting Balance”. Genetics. 202(1), 3–4.
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2016 | Journal Article | IST-REx-ID: 1382
Ellis T, Field D. 2016. Repeated gains in yellow and anthocyanin pigmentation in flower colour transitions in the Antirrhineae. Annals of Botany. 117(7), 1133–1140.
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2016 | Journal Article | IST-REx-ID: 1357   OA
Barton NH. 2016. Richard Hudson and Norman Kaplan on the coalescent process. Genetics. 202(3), 865–866.
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2016 | Journal Article | IST-REx-ID: 1631   OA
Kelleher J, Etheridge A, Véber A, Barton NH. 2016. Spread of pedigree versus genetic ancestry in spatially distributed populations. Theoretical Population Biology. 108, 1–12.
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2016 | Thesis | IST-REx-ID: 1131
Tugrul M. 2016. Evolution of transcriptional regulatory sequences, IST Austria, 89p.
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2016 | Journal Article | IST-REx-ID: 1409   OA
Abbott R, Barton NH, Good J. 2016. Genomics of hybridization and its evolutionary consequences. Molecular Ecology. 25(11), 2325–2332.
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2016 | Thesis | IST-REx-ID: 1125
Novak S. 2016. Evolutionary proccesses in variable emvironments, IST Austria, 124p.
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2016 | Journal Article | IST-REx-ID: 1358
Friedlander T, Prizak R, Guet CC, Barton NH, Tkacik G. 2016. Intrinsic limits to gene regulation by global crosstalk. Nature Communications. 7, 12307.
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2016 | Journal Article | IST-REx-ID: 1195   OA
Franssen S, Barton NH, Schlötterer C. 2016. Reconstruction of haplotype-blocks selected during experimental evolution. Molecular Biology and Evolution. 34(1), 174–184.
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2016 | Journal Article | IST-REx-ID: 1241   OA
Uecker H, Hermisson J. 2016. The role of recombination in evolutionary rescue. Genetics. 202(2), 721–732.
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2016 | Journal Article | IST-REx-ID: 1359   OA
Paixao T, Barton NH. 2016. The effect of gene interactions on the long-term response to selection. PNAS. 113(16), 4422–4427.
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2016 | Journal Article | IST-REx-ID: 1518   OA
Lohse K, Chmelik M, Martin S, Barton NH. 2016. Efficient strategies for calculating blockwise likelihoods under the coalescent. Genetics. 202(2), 775–786.
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2016 | Journal Article | IST-REx-ID: 1158   OA
Roux C, Fraisse C, Romiguier J, Anciaux Y, Galtier N, Bierne N. 2016. Shedding light on the grey zone of speciation along a continuum of genomic divergence. PLoS Biology. 14(12).
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2016 | Journal Article | IST-REx-ID: 1172   OA
Sachdeva H, Barma M, Rao M. 2016. Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae. Scientific Reports. 6.
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2016 | Thesis | IST-REx-ID: 1398
Ellis T. 2016. The role of pollinator-mediated selection in the maintenance of a flower color polymorphism in an Antirrhinum majus hybrid zone, IST Austria, 130p.
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2016 | Journal Article | IST-REx-ID: 1420   OA
Bod’ová K, Tkacik G, Barton NH. 2016. A general approximation for the dynamics of quantitative traits. Genetics. 202(4), 1523–1548.
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2015 | Journal Article | IST-REx-ID: 1666   OA
Tugrul M, Paixao T, Barton NH, Tkacik G. 2015. Dynamics of transcription factor binding site evolution. PLoS Genetics. 11(11).
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2015 | Journal Article | IST-REx-ID: 1818   OA
Polechova J, Barton NH. 2015. Limits to adaptation along environmental gradients. PNAS. 112(20), 6401–6406.
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2015 | Journal Article | IST-REx-ID: 1851
Priklopil T, Kisdi E, Gyllenberg M. 2015. Evolutionarily stable mating decisions for sequentially searching females and the stability of reproductive isolation by assortative mating. Evolution. 69(4), 1015–1026.
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2015 | Journal Article | IST-REx-ID: 1542   OA
Paixao T, Badkobeh G, Barton NH, Çörüş D, Dang D, Friedrich T, Lehre P, Sudholt D, Sutton A, Trubenova B. 2015. Toward a unifying framework for evolutionary processes. Journal of Theoretical Biology. 383, 28–43.
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2015 | Journal Article | IST-REx-ID: 1681   OA
Priklopil T, Chatterjee K. 2015. Evolution of decisions in population games with sequentially searching individuals. Games. 6(4), 413–437.
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2015 | Journal Article | IST-REx-ID: 1883
Keller-Schmidt S, Tugrul M, Eguíluz V, Hernandez Garcia E, Klemm K. 2015. Anomalous scaling in an age-dependent branching model. Physical Review E Statistical Nonlinear and Soft Matter Physics. 91(2).
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2015 | Conference Paper | IST-REx-ID: 1430   OA
Paixao T, Sudholt D, Heredia J, Trubenova B. 2015. First steps towards a runtime comparison of natural and artificial evolution. Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation. GECCO: Genetic and evolutionary computation conference 1455–1462.
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2015 | Journal Article | IST-REx-ID: 1699   OA
Uecker H, Setter D, Hermisson J. 2015. Adaptive gene introgression after secondary contact. Journal of Mathematical Biology. 70(7), 1523–1580.
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2015 | Journal Article | IST-REx-ID: 1703
Broadhurst L, Fifield G, Vanzella B, Pickup M. 2015. An evaluation of the genetic structure of seed sources and the maintenance of genetic diversity during establishment of two yellow box (Eucalyptus melliodora) seed-production areas. Australian Journal of Botany. 63(5), 455–466.
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2015 | Journal Article | IST-REx-ID: 1809   OA
Trubenova B, Novak S, Hager R. 2015. Indirect genetic effects and the dynamics of social interactions. PLoS One. 10(5).
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2015 | Conference Paper | IST-REx-ID: 1835   OA
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. 2015. Model checking gene regulatory networks. 9035, 469–483.
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2015 | Journal Article | IST-REx-ID: 1519   OA
Barton NH, Servedio M. 2015. The interpretation of selection coefficients. Evolution. 69(5), 1101–1112.
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2015 | Journal Article | IST-REx-ID: 1850   OA
Novak S, Cremer S. 2015. Fungal disease dynamics in insect societies: Optimal killing rates and the ambivalent effect of high social interaction rates. Journal of Theoretical Biology. 372(5), 54–64.
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2014 | Journal Article | IST-REx-ID: 2169   OA
Barton NH, Novak S, Paixao T. 2014. Diverse forms of selection in evolution and computer science. PNAS. 111(29), 10398–10399.
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2014 | Journal Article | IST-REx-ID: 1908   OA
Weissman D, Hallatschek O. 2014. The rate of adaptation in large sexual populations with linear chromosomes. Genetics. 196(4), 1167–1183.
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2014 | Journal Article | IST-REx-ID: 1896   OA
Kollár R, Bod’ová K, Nosek J, Tomáška Ľ. 2014. Mathematical model of alternative mechanism of telomere length maintenance. Physical Review E Statistical Nonlinear and Soft Matter Physics. 89(3).
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2014 | Journal Article | IST-REx-ID: 1909   OA
Ezard T, Prizak R, Hoyle R. 2014. The fitness costs of adaptation via phenotypic plasticity and maternal effects. Functional Ecology. 28(3), 693–701.
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2014 | Journal Article | IST-REx-ID: 537   OA
Prizak R, Ezard T, Hoyle R. 2014. Fitness consequences of maternal and grandmaternal effects. Ecology and Evolution. 4(15), 3139–3145.
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2014 | Journal Article | IST-REx-ID: 1936   OA
Arbilly M, Weissman D, Feldman M, Grodzinski U. 2014. An arms race between producers and scroungers can drive the evolution of social cognition. Behavioral Ecology. 25(3), 487–495.
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2014 | Journal Article | IST-REx-ID: 2023   OA
Novak S. 2014. Habitat heterogeneities versus spatial type frequency variances as driving forces of dispersal evolution. Ecology and Evolution. 4(24), 4589–4597.
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2014 | Journal Article | IST-REx-ID: 2174   OA
De Vladar H, Barton NH. 2014. Stability and response of polygenic traits to stabilizing selection and mutation. Genetics. 197(2), 749–767.
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2014 | Journal Article | IST-REx-ID: 1932   OA
Trotter M, Weissman D, Peterson G, Peck K, Masel J. 2014. Cryptic genetic variation can make "irreducible complexity" a common mode of adaptation in sexual populations. Evolution. 68(12), 3357–3367.
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